Array 1 570877-570444 **** Predicted by CRISPRDetect 2.4 *** >NZ_CYZC01000002.1 Bifidobacterium pseudocatenulatum strain 2789STDY5834840, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 570876 33 100.0 34 ................................. TCATCCATTTCAAAAGTCGATGACAAGATTTCCT 570809 33 100.0 33 ................................. ATTTCGAGATTGTTGGACGCCCATACGCGTTTC 570743 33 100.0 35 ................................. ACCGTGGACGAAGCCAAACGCATCCTGAAGGCCGC 570675 33 100.0 33 ................................. CATAAGGAGCGTGACGAGAAGGCCACGGAGGCG 570609 33 100.0 33 ................................. CTTGAGTTCGCGCACGCTGCAGGTGTTGGTGCC 570543 33 100.0 34 ................................. TTTTGGACCGTTTGGTCAAGCGAAGCGTGCCCGG 570476 33 81.8 0 .......T..TT.C..A...C............ | ========== ====== ====== ====== ================================= =================================== ================== 7 33 97.4 34 GTCGCTCCCCGCAAGGGGAGTGTGGATTGAAAT # Left flank : ATTGCACTCGAAAGTAAGTCGCTCCCCGCAAGGGGAGTGTGGATTGAAATAGAATCGCCATCGCATGATCCGGACAGTCCGCTTGTCGCTCCCCGCAAGGGGAGTGTGGATTGAAATCTAGAGTCGGAAGCGTGCGGCCCGTCTTCATAATGTCGCTCCCCGCAAGGGGAGTGTGGATTGAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : CGGTGTCTGCAGCGTTCCGGCCACCGCGTGGATGTCGCTCTCCCTGTTTATGTCCAGTGTTCTCCGCACATGCGGGGATGATTCCGCATGTGCGGGACTGTTAGTATCAATGACAATCCGAGGGGGTGAAAACGAGTTTATGGGCACGCGTGCGGAGTCTCAGATGCGCAGAACTCCTCACGCAGCGCATATCACAATCCCAGCCAGGCGCGTAGGTCACGAATTTCCTGATCGCAGATGCCGTGGACCATTCCCGGATATTCGAAATACGTGAGATTGCCGGTTTGCGCAAGTTTGTTGTGCGCGCACTGTTGGTCGGCTAAAGGAATTGTGCGGTCTTCGCTGCCGTAGCAGAGTGCGAATCGCGTGCGTCCGGTCGCGGGCAAAGGCTCAGCGGTTTCGCCTTTGAATGATGGGCTCATCAGAATCGCCCTGTCGAACGCATCGGGATGTTCCGCAACCATGCGATACGACAGGTATCCGCCCTGCGAAAACCCGAT # Questionable array : NO Score: 9.13 # Score Detail : 1:0, 2:3, 3:3, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGCAAGGGGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.30,-9.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [38.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : NA // Array 2 571495-571193 **** Predicted by CRISPRDetect 2.4 *** >NZ_CYZC01000002.1 Bifidobacterium pseudocatenulatum strain 2789STDY5834840, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 571494 33 100.0 34 ................................. TCCCTGTTACGCAGTCGCTATCCCGGATGGCCAG 571427 33 100.0 35 ................................. GTTTATAACTGCATTGTAATTGCACTCGAAAGTAA 571359 33 100.0 34 ................................. AGAATCGCCATCGCATGATCCGGACAGTCCGCTT 571292 33 100.0 34 ................................. CTAGAGTCGGAAGCGTGCGGCCCGTCTTCATAAT 571225 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= =================================== ================== 5 33 100.0 34 GTCGCTCCCCGCAAGGGGAGTGTGGATTGAAAT # Left flank : GGCGTCTACGTTTAGTGGCAAAAAGCTGCATGAAATATGGGCAACGCGTGCAAAATAGCGTTTTCGAATGTAGCGTTACTTCTGCGGAGTATCTCACGCTTAAGCATGATCTGTTGAGCATTATCGATGTCAAAACGGATAGTTTGAGATATTACAATTTGGGAACGAACTATTCACGGCGCATTGAACACTTAGGCGTTCAACGTCATGTTCCCGTTGATGGAGTCATGATGGTATGACTTCTAAACGACATGCAGTGCGACCCTGAAGCAGTCATGAGTTACAGGTAGGTTCGCACCTTTTTTGTGCGGAGGAAATTAAAACTGGAACCCTGATGTAATTTCGGATTGTTGTTTGATAATCGAAAAGTGTAGTCAGATAGAGTTTGATCTTTGCATTTGGACGTATTTGGGGCGGTGGGGAACTGATGTAATATGTGTATCAGCCGAGATGAGGTTTTGCTTGAATCATTATTTGGTCAAAAATGTCTCATTTCTGCG # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCGCTCCCCGCAAGGGGAGTGTGGATTGAAATTCATCCATTTCAAAAGTCGATGACAAGATTTCCTGTCGCTCCCCGCAAGGGGAGTGTGGATTGAAATATTTCGAGATTGTTGGACGCCCATACGCGTTTCGTCGCTCCCCGCAAGGGGAGTGTGGATTGAAATACCGTGGACGAAGCCAAA # Questionable array : NO Score: 9.06 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGCAAGGGGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.30,-9.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [0.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : NA //