Array 1 60558-58366 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPKU01000022.1 Vibrio navarrensis strain VN-0513 NODE_22, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 60557 28 100.0 32 ............................ ATTCACTACCTTGGTAGCCCCAAATATCACCA 60497 28 100.0 32 ............................ AGACTTCAGCTAATAATGATGGGCCCGGTGCG 60437 28 100.0 32 ............................ GAATGGTGCCAGGGAGCTTGTTGCCGCGCAGA 60377 28 100.0 32 ............................ TTTCGTGAATTTGTCAAATGTCCAGCCGCCGT 60317 28 100.0 32 ............................ TCCAGTTCGCAAACATCGAGATCGAGAACAGG 60257 28 100.0 32 ............................ ATGTTAGTGTAGTCTGTTTCATTCCTCTAACC 60197 28 100.0 32 ............................ AATCAAATCATCAATCGCATCGTATCTGATGT 60137 28 100.0 32 ............................ AGAGAGCGAGCCTGAAAAATCAACTGAATAGG 60077 28 100.0 32 ............................ AGCCTGTCAAATCCTTTAGCTCATTACATGCA 60017 28 100.0 33 ............................ ATCGAAAAAGCCGATACATAAAACCTTTTCACA 59956 28 100.0 32 ............................ GGAGCTAAAGGCTTTCGTTGGACTCTGACCTC 59896 28 100.0 33 ............................ ACAATGGTGCACAGAAAAACAAAGTGCTTTCAT 59835 28 100.0 32 ............................ TTGTTAATCAATTTATCTCGCTTTGTTGTAAG 59775 28 100.0 32 ............................ TCTTTGGGTTATCCACGGCTTACAATCCCATG 59715 28 100.0 32 ............................ ATCGAATCGCATTATGCTTCCTCCATCTCGAT 59655 28 100.0 32 ............................ TTATCTACTCACGAACTCCAAGATTTCACTGC 59595 28 100.0 32 ............................ TTTATCGCGCCTCTGCGCTATCTATTTCGTTT 59535 28 100.0 32 ............................ ACTAACTCCAAAGCATAACCTTCCCACACATA 59475 28 100.0 33 ............................ GTTAGGAAGTTCAGGTTTGAATTGTGTGGACAA 59414 28 100.0 32 ............................ GTTATCGTACATGAGCGCTTGTATTCCTGTCT 59354 28 100.0 32 ............................ TTCAAAGGAACGGTTAAAAGGCAGGATAAGTA 59294 28 100.0 32 ............................ GCAAATGCCCTGCGAACGCCACGCGCGACACC 59234 28 100.0 32 ............................ ACTGGCAATTCTCAGTAATCGCCGTGGCTTGC 59174 28 100.0 32 ............................ ATCTTTTTTGCTATGCTCTTTAGCTTTATGTG 59114 28 96.4 32 .................A.......... TCGAAAGAATCACGCGCCAGAGGCTCATTTAA 59054 28 100.0 32 ............................ AGATAAGAGACAGAAACGATTGATACCGTGAT 58994 28 100.0 32 ............................ AAATAGACGCGGCACCAAATTGACCTAAACTT 58934 28 100.0 33 ............................ ACCAGGTGTAATGATCATAGATTAGCGATGTAT 58873 28 100.0 32 ............................ ATCACGGTGACACCCGAAATGGTTGGTTTGCG 58813 28 100.0 32 ............................ GTCATCGCCAGCGTACCAGAGCACATCTTCAC 58753 28 100.0 32 ............................ ACCATCTTGAGCATTACGTGATTTACGTGAGT 58693 28 100.0 32 ............................ TTGAAATCAGCCGGACGTTGATTATCGAAATC 58633 28 96.4 32 ................A........... TTCTGTGCGACTCTACGCAGCTTTTCCATGCA 58573 28 100.0 32 ............................ AACAGGAAGCTCTCTTGAGTCCGTTTCGTAGT 58513 28 100.0 32 ............................ TACTGGTTTAGTGTTAGATTCATTTCCGTTGC 58453 28 100.0 32 ............................ CTTAAAAGCGCGTCTTTGAAGTAATCAGAATT 58393 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 37 28 99.8 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CAAATCAGTGAAGTGTTAAGCGTTCCTGAGCAAGTTCAATACCGGGTGATCTCAGCTAAGCGGCGCAATTTAAGCAGTGCAAAGCTGCGGCGCTTAATTGCACGAGGGAGTATCAATAAAGAAGGTGAGCAGCGCTATAAAGAGAAGATGCTGAGCCAGAGTATTAAAGCACCTTATCTTGACTTACAGAGTGGCTCGACAGGACAAAAATATCGTAAATTCTTTGAGTTTGGTGAAATGAGGTCAATACCAACATCCGGAAAGTTTGATTCCTATGGGTTAAGTCAGTCAGCTACCGTTCCTTGGTTTTAATGTTGTCGAGGGAAGCTTTCGTTAAATTTGTTTTTACTACGTAAAAAAGGCATTTTTACCCTTTATTTTTGCTCTTTAAAAATAAGCTTTAAATACAATGAGTTACAATAGGCGCTTTTTAATAAGGTAAAAATGCAATTTTTATCCTAACTAACTGTTGTAACTTATTTTTATTGATTTATTCTATA # Right flank : GCCGATTGATTGCAGCTTGCGAGCTACGGCGAGTTTGATAAGGTGAATAGATTTTGCCTATCTAATTGGGCTGTATCGTTATACCTGAGGTAATACGTTAAATGCTAAATTAGCAAAATATCTTACACGTTTATGTCCGTGCGACGTGAAGTCGTATGAAGCGCTGTTCACCGCGATAAGAGTGAACCGTTTGTATCACCAGACGACCCTAAGGTTCTGAATAAAGAAGCGAGCCTGACAATGTAACGAAGTTTGGCACTGTGCCAAACGGGAGCAAAACCGTGAGGGGATGCTCCTCCTGATAACCACGAATTGGGTGAGTGCTAGGGAATCAGTATGATGAACGAAAGTGAATCCATGTAAGGTGCGTTATGCGATGAAGCAGCGGAAGTGGTTAATACGCTGTGGCCAAAACGGCGATGGGAGTAGGAAAGAGATTGGACAGTGCTCTTTCGTGATCGACAGGCTCCTCGCACTATAGTGGGCATCTAACCTGATAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 8562-6014 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPKU01000030.1 Vibrio navarrensis strain VN-0513 NODE_30, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 8561 28 100.0 32 ............................ CTTAGAGTTCTGCTGAGACTCTAAGAGAAATT 8501 28 100.0 32 ............................ TAGATGCCTCACGGGGCACATCAGCTCGTTTA 8441 28 100.0 32 ............................ ACTCGCCGCGCACGTAAGCGCCAACACCGCCC 8381 28 100.0 33 ............................ GTCTCGATGTCGCCGTCGTGAAACTCGATTAAT 8320 28 100.0 32 ............................ TGCATGGAGATATTCAGGCGGTCAACAAGAAT 8260 28 100.0 32 ............................ GTGTTCATCGCTTCCACGGCTGCACTGTTCTT 8200 28 100.0 32 ............................ TAATGGCAAAGTTTGACGCCATAAGCTCCCGC 8140 28 100.0 32 ............................ ACATGGCGAAGTCAGTTTCATAGATTCGGTGT 8080 28 100.0 32 ............................ CCTAGTAAAATTCGCTCTTGATATGTCGTGTT 8020 28 100.0 32 ............................ GCCCACCCTTTGCTGCTGAAAGGTCGCCAGTG 7960 28 100.0 32 ............................ TTGAAGAATTTTTGCAGGAGAAGCTTTGAGTT 7900 28 100.0 32 ............................ TGCGAAAGGCGACCGCGCAGAAATGACCCTTT 7840 28 100.0 32 ............................ TTCCCCGACACCTACGGCAAGTTGGTGACTCA 7780 28 100.0 32 ............................ CGATAAGCGCCCAGAAGGGGAGCCAGCGCCTA 7720 28 100.0 32 ............................ TCTAGCGCTTCAAATAATGGCGAGAATGCTTT 7660 28 100.0 32 ............................ AGTGTGGTAAAGCGCTAGCGGAAATCGTGGCA 7600 28 100.0 32 ............................ TTTTCAAGTGGCAGAGAGAACTCAACAGGGAA 7540 28 100.0 32 ............................ ATTTCGCTGGGCGTACTGTCCGCTGGCTAGGT 7480 28 100.0 32 ............................ TCGTGGCGATTTTCGCAAGCTCAATCACCAGC 7420 28 100.0 32 ............................ TGTTCATCCAGACCCCGAATGGTTTCCTGAAA 7360 28 100.0 32 ............................ TTTGCGCACGTCAGGCCAAGGCTAAACACTAA 7300 28 100.0 32 ............................ TCGCGTTCCTTGTTCTCCTAGCTCTCTCAAAA 7240 28 100.0 32 ............................ AATCTAATGATTTCTGTACAGGTTTCATCACT 7180 28 100.0 32 ............................ AGAACGAAACAACCACGGTCACGCTTTCATCC 7120 28 100.0 32 ............................ TTTTTCGAGTTGCTCAACAACAGCATCAGGTA 7060 28 100.0 32 ............................ TTAAATGAGGTGTCCGAATGAAAGCACAAATC 7000 28 100.0 32 ............................ TCCATAGCGCAACCAATCTGTACGCAAGCATC 6940 28 100.0 32 ............................ GCTACGAACTCGCTTACACCTCAGTCAGCATT 6880 28 100.0 32 ............................ TTGCTGGTCTTGCCACTTTCTAGTCTGCAATT 6820 28 100.0 32 ............................ ACTACCGGATGCGTGATTGCACGTCATTCGCT 6760 28 100.0 32 ............................ GTTACTCAATCGTGCGTCAATAAGCGAATCAA 6700 28 100.0 32 ............................ ACTAAGAAATGCACTGCTGTCGGGTTATCAGC 6640 28 100.0 32 ............................ TACCAAGCTGTTTAAGTGTTTAATTATTTGGC 6580 28 100.0 32 ............................ TCATCGTCATGACGCGCGGACGTACTCGCCAC 6520 28 100.0 32 ............................ AGTAAAAGGGCAAGCGGAACAACAAGTTTTAA 6460 28 100.0 32 ............................ GTAACGTACCTGTTGCGGCGTCTGCGCGGGTT 6400 28 100.0 32 ............................ TTGCCACAATGGTGACAAAGCGTGCCTGTTGG 6340 28 100.0 32 ............................ CAAATCATCAACATAAGGGTCGGAAGGTCTGA 6280 28 100.0 32 ............................ CTAAAGAGCTGGAATCCTTCGCGTACCAGAAA 6220 28 100.0 32 ............................ TCTAGCAAGAACCCAACATCATCATCCGACCG 6160 28 100.0 32 ............................ ATCTCTTCAACGCGCCAGCCCACAATCGATTT 6100 28 100.0 32 ............................ GTACACAGCAGCACCAAGGATGGCAGCAATGG 6040 27 96.4 0 .......................-.... | ========== ====== ====== ====== ============================ ================================= ================== 43 28 99.9 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GATGTGACTTACGTAAGCTTTGTACGCAAGCAGGTGAAATCGCCCGAACGAATAGAGCAGGATATGCAGCAAAAAGCCGAACTATGGGCAGCAAAATCCGGTAAACCGCTGGTGGAATGCTTAGCGGATTTGCAACAAAGCAAGCCGGCAGCATTGTGCGCTTTGCCGTTTATTTACTTGCATAGCCAGCAAACCAAGCAACGCTCCCCAGAAAAAAGCAGCAAGTTCCCGCTGTTTATTCAGATGGAGCAGCAAAGCACATCACAAGATGGGAGCTTTGATTGCTATGGTTTGAGCAGCAAAGCGCATGGGCAGTCAGCATTGGCTACCGTACCGCATTTTTAAAATGAACGAAAAAGGGTAGTTTTTACCCTTTATTTTTGCTCTTTAAAAATGTGCTTTTAAAACAAATGGTTGCAATAGGCGGTTTTTAACAAGGTAAAATGGCGATTTTTATCCTAACAGCCTGTTGCAGCTTATTTTTATTGGTTTATTCTATT # Right flank : AACAAAAACGCCACGAGCAAAGCTGGTGGCGTTGACATCAATTCTAATCTAATCATAGCAATCGAGCATTTTAGATGCCCCCGTACCCCAAGCCGTACCTAGAGCAATTTTTGCTACAATCAAAACCCCTTAAAGCCCTTATTTAATGCGCTCTAGCATCACGCCCGCTTCCATATGGTGGGTGTAAGGGAACTGGTCAAACAGGGCGAAACGAGTAATGGTGTGGGTTTCGCTCAGGATTTCGAGGTTCTCGAGCAGGGTCTCTGGGTTGCACGAAATGTACAAAATGCGCTCATAGCCTTGCACCATTTTACAGGTGTCGATGTCCATACCTGCGCGCGGTGGATCGACAAAAATGGTGTCGCAGTTATAGCTATTAAGATCGATGCCATGGTCTTTCAGGCGGCGAAACTCGCGTTTGCCTTCCATCGCTTCGGTAAACTCTTCCGCTGACATACGGATGATCTGCACGTTCTCAATTTTGTTGGCGGCAATGTTGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //