Array 1 212819-212372 **** Predicted by CRISPRDetect 2.4 *** >NZ_FKGE01000003.1 Enterobacter cloacae strain MDR0129, e773, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 212818 28 100.0 32 ............................ GTCGGCCCCCTTGAACTTAAGGCCATCTTTAT 212758 28 100.0 32 ............................ AGTTCCAAGCATGGCTCACCGCGAAGCTCGCG 212698 28 100.0 32 ............................ AGCATTGCCGTATAACGTTGCTCAAGTTTCAT 212638 28 100.0 32 ............................ TGGATGGACGCGGGCAAGGGTGCGCTCACAGC 212578 28 96.4 32 A........................... TGTTTATGCAACGATGGATTTAAAGGGCAAAG 212518 28 100.0 32 ............................ CCCCAGGAAAGGAACAGCAGTCACCAGCGCTT 212458 28 92.9 30 ...........C...C............ ATAGAAAATAAGGTCTATCCCCCTTACTCT C [212433] 212399 28 71.4 0 C.......T..A....A....CCT...G | ========== ====== ====== ====== ============================ ================================ ================== 8 28 95.1 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GAACGAAACGGGCTACGCGTTCGCTTTCATCCGGCGTCAGCGTCCGTCCCGCGCTTTTGCGGCGGGCCACGTTGCGTTCGTTAATCCCAGTGACGCGCAAAATGTCCGCTTTCGACATTGCCGTCCACTCATGAATGTTGTCGAGGACGCTGACGGGTAAGCCCTGATTGAGAAATTCAATCAGCCGCATACCTCTGTTTGCTGGTAAACCGGCGTACCGCCAAAGCGCGTTATCAGCAGGTTTCTGCGCGGGGATCCATGTTCTCATGTTACCTCCTGAGTCATGTCATTTGTCATAGTTAAGTATAGCCATTTGTCAGGGGGAGTGAAATGGTTGTTTTGTATGCAGAGGGGAAAGTGGGGCATTTGACCCTAATTTTTAGTGTATTTGTAATGTATTGATTTTAAATGGATAATTTTGATGGGTAAAAAAGAGGGTAAAAGAAGAGTTTTTAGCTTTTTTTGTATGAAAATCATAATGGTGTGGGATTATTATTCCA # Right flank : CAGAAACAAAGCCCAAATAATTGTTCAAATAATCAACTACACCACAAAAAAATAAGGCCGGGAAAATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTTAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGATTAAAACGCAGCAAAACATTTTCTGCGCATTGCCCAAGCGTCACGGTACAACCGAACAGGAAGCGCATTCGTAAAGGGGAGACGACAG # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 222694-222306 **** Predicted by CRISPRDetect 2.4 *** >NZ_FKGE01000003.1 Enterobacter cloacae strain MDR0129, e773, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 222693 28 100.0 32 ............................ CAGCACATTCATCATTTGATCATGCGAGCCGG 222633 28 100.0 32 ............................ GCGCATCGAGCTGACGCGTTCGCGTAGGTTCG 222573 28 100.0 32 ............................ CGTAGCGGATAAGGGAATATAAATGCGTTTTT 222513 28 100.0 32 ............................ TGTGGGAATAGCGTCAGCGCCACTGGCGACGG 222453 28 100.0 32 ............................ AATAGCCTTGCATATTAGCAAGGCGGACGGCC 222393 28 100.0 32 ............................ TACGGTTACGCGGTCAGGTGTCTCAGTAGGTT 222333 28 78.6 0 ...........C.........AC.CCT. | ========== ====== ====== ====== ============================ ================================ ================== 7 28 96.9 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TCCCGCAAACGCAGCCCGTTTGCCGCTGTCTCGGGGCCTGGCTGGAAGAGGTGAAATCCGGCCTCACAGAGTCAATGCGTGATTTTCAGGTGGTGGAATTTGAGGATGAAGCGGAACAGCCGCGACAAAAAGAGTGGTTGCTGGAAGATACAGAAACGAAATGCGACTACTGCCGGGCGTTAAACCATGTGCTACTGGTGTCGCATTTTGACCGTGATATGTTGCCGCACCTTACGGGGCTGCTGCATGACATTACGCATTCGATGGCCGCAGATGTCGTTGCACCTCAACGTGCAGAAACGGTAATTCACATTATTTCCTGAGTGCAATCCGAGGCGTCGGGGGTGTTCCTCTGACGCCATAGGTTTAAACCCTTTTTTCTGATATTTACATAAGTTATTGATTTATATGGTGAGAATTTACGTCCCAGAAAAAAGGGTTTTATGCGTAAAAGTTGATTATTTTGTTTGCTAACAATAAGATGGCGTTGTTTCCTTTCA # Right flank : AAACCAACCCTCTAAAACATTCACCCTACCTATTTAAACCTTAATACCATCAAACCCACCCTCTCTATTTTTCACAATAAATAAAAAATTCATTCACGGACCAATTATATTCTAATGAATATATTATTCGTAAAAATAATGCATTAAATGAAAAAGTAATTTTTCGCTTTATTATCACGGTAATTACTCTTCATTTGATACCCGTCACATTTGTTTTCATCTTATCTCCGATAACATACCGCGCATTCAACACCTTGAAATAAAAGCCCTTGCCATGTCCGTAAACAGCATCACCCCTACAGACTTAAAAACCATTCTACATTCAAAACGCGCCAACATTTATTACCTGGAGAAATGTCGCATCCAGGTAAATGGTGGGCGCGTTGAATATGTCACCCAGGAAGGCAAAGAGTCGTTTTACTGGAATATTCCCATCGCTAATACCACAGCGGTGATGCTGGGAATGGGAACATCCGTTACGCAAATGGCAATGCGGGAAT # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 238085-237816 **** Predicted by CRISPRDetect 2.4 *** >NZ_FKGE01000003.1 Enterobacter cloacae strain MDR0129, e773, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 238084 28 100.0 32 ............................ AAAGCCGAAAATAAGCACCTGGCCCGTGTTGC 238024 28 100.0 32 ............................ AAATCGGGAAAGGTCGGAGAATTCCATCGTTT 237964 28 100.0 32 ............................ TGATCGCGCATCTGCAGCACCTGGTTGTCGAT 237904 28 96.4 32 ...........................G GCACTTCAGCCGGGTAAGCGTCGGTGGTTAGG 237844 28 82.1 0 .....A.....A.........A.GC... | C [237818] ========== ====== ====== ====== ============================ ================================ ================== 5 28 95.7 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TCACGGCTTGCACAAGCTTTTTGGCGGCGTGGGCTTTATCAGCGGCATGCTGGTGGAGAAAGGGCTGCCGGGGTTTATCGCCTACGGCGTGTTGGTTGGCGAAGTGGTGGCACCGATCCTGATTATTGTTGGGCTCTTTACGCGCCCGGCCGCGCTGGTGCTGGCATTTACGATGATTGTGGCGTGGCTGATGGTGGGCGTGGGGGAAACGCTCGCCCTTGATAAGGTTGGCGCATGGGCGATTGAAAGCCTGGTGTACTTCTTTATCGGCTCGCTGGCTGTCGCATTTTTAGGGGCAGGGCGGTTTGCGGTAGGGAAAGCACCCGCGTGGCGATGAAGGCGGGTGTGCTGATAACAAAAGGGTCTGTGGACCCTTTTTTATCGAAGCTTTTTAAGTCTTTGATTTTATTGTGCTGAATTGTATGTCATGAAAAAGGGTTTAAGGGGGATTTTTTAGGGGAATTCTTTATCTTACAAGGTGATAGGTGTAGATTGTTCCA # Right flank : TGTAGGTCGGGTAAGCGTCAGCGCCACCCGACAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAAGCCAATATTTCCGAATAAGCCTGAATTAGCACCGTCTTCATCGGGTTCGGATAAACGAAACGTCGCCCGACAAAAAGCCCGGTGGCGCTAGCGCTTACCGGGCCTACGAAGAGCCAGCACGTACAAAGTAGGCCGGGTAAACGCAGTGCCACCCGGCAAAAATGGCGGCACCGCATCACATTACGCCAGCACCAGATCGCCCTGCGGGTGGCATGAACACGCCAGCACGTAACCCTCGGCAATTTCCGCGTCAGACAGCGTCATGGTGCTGGTGACGGTATACTCGCCTGAAACCACCTTGGTCTTACAGCAACCGCACACCCCCGCACGACAGGCAGCCACGACCGGCACCTTGTTGCTTTCCAGCGCCTCCAGCAGCGTGGTGCCCACGCGACCAAAGAAGGTCTGCGCTGGCTGCAGCTTGGTGAACT # Questionable array : NO Score: 5.85 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //