Array 1 181790-179262 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUCN01000002.1 Klebsiella pneumoniae strain 177E9 contig_0002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 181789 29 100.0 32 ............................. TTAACCATTCTCCCCGGCTCAGTACCTGCCCG 181728 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 181667 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 181606 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 181545 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 181483 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 181422 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 181361 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 181300 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 181239 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 181178 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 181117 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 181056 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 180995 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 180934 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 180873 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 180812 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 180751 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 180690 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 180629 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 180568 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 180507 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 180446 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 180385 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 180324 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 180263 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 180202 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 180141 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 180080 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 180019 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 179958 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 179897 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 179836 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 179775 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 179714 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 179653 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 179592 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 179531 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 179470 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 179409 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 179348 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 179290 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 42 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //