Array 1 89257-90847 **** Predicted by CRISPRDetect 2.4 *** >NZ_AMFQ01000013.1 Acinetobacter sp. WC-743 ctg7180000004618, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 89257 28 100.0 32 ............................ AGTACCGTGTGAATGCGAGTTTGAATTCTTTA 89317 28 100.0 32 ............................ TTTAGTTAAAAATAATTTAGATGAATTTTGAG 89377 28 100.0 33 ............................ TTTTTAAAAGGTTAAGATGTACGAAATTAACTT 89438 28 100.0 32 ............................ TTTATTCATTCCGTTCTCAGGTGTGAATTCGC 89498 28 100.0 32 ............................ ATCCAGCTCGATGTCGATTACAAATGTCGTGA 89558 28 100.0 32 ............................ GAAACATGAAACGTGGGTATAACAATGAAACC 89618 28 100.0 33 ............................ TCTTAATTAATACGGCTTAATAAAATTTCCCAA 89679 28 100.0 32 ............................ GCAGCGTGGACAGATGTCGGGGGTCAGTCTCC 89739 28 100.0 32 ............................ AACCAATGAAAACCCCGAGACAAATAGCAACG 89799 28 100.0 32 ............................ ACAGTATGGTTGAACTCGTTGGCTACGGTGAA 89859 28 100.0 32 ............................ GCTTGAAATCATCACCTCGCGAACGTTATCCG 89919 28 100.0 32 ............................ AACCCCGATTAAACGCCCCCATTCGATTAACG 89979 28 100.0 32 ............................ GTGACGGGTTAGAATCTTCGGTCTATCTGAGT 90039 28 100.0 32 ............................ GCCCTGAGATCGTAAAGTTAAACTAATATCCT 90099 28 100.0 32 ............................ TTAGCTGTATTGGACCAGTTAATTCCTGTTTG 90159 28 100.0 32 ............................ TGAAGGGTTTGTTTTTGTGCCGAAAGAATTGA 90219 28 100.0 32 ............................ TCAACGCACCCATGCGGTGTGGTACGGTCGAC 90279 28 100.0 33 ............................ TGTTTGTGTTCCAGTGTCAGGGTCAGTTTTATT 90340 28 100.0 32 ............................ GACAGTCCAGTTAATAAGACGAATATCAGACA 90400 28 100.0 32 ............................ ATTGTGCGGGGGTGGACCTTGTACTTAATTGA 90460 28 100.0 32 ............................ TTGAACGGTATAGATCGCAATAAATCCAGATT 90520 28 100.0 32 ............................ TTGCCAGTCCCAACGAATTAGATAATTCCAAT 90580 28 100.0 32 ............................ TCAACAGGTAGGCTAGAGATCGTTGCACTATC 90640 28 100.0 32 ............................ TACAACCAAGCATGTCGCTATCACATTGGCAA 90700 28 100.0 32 ............................ TGGAGCATGAGCCGAGAGAAATTGACACAGAA 90760 28 100.0 32 ............................ TATAGTATATAAAAAATTCTATTACCCCAAAT 90820 28 96.4 0 .....................C...... | ========== ====== ====== ====== ============================ ================================= ================== 27 28 99.9 32 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : TTCCAGAAACAGACTTGGAATCATACATAATTCAAAATTTTATTCTTATAAAAACAATAAGCACTATTTTTGATGAAATTTACGTTATAGCACAAGTTTTATTGAACTTTAACATCATATAAAAATGATCTTTTTTAGCAGTTTATTGAGTTGCAAAGGAAGTATGTATTATCGTTTGCTAGATAAATTAAATTTTAAATATTTGATTGATAAATAAATTATTTTATATGAGGTATGTCGTATGATTCTAAGGAGTGAATCTATTAGAGTTTGTATTATATACTGCTATAACTTGTTGCTGATGAGGCAAAAGGGAACAATTTTGGGAAATATGCTTTTAATAGAATTACGATTATTCAAATATTTTAACCCAATATTTTTTTACTCTTTAACAACTGAATAAAATCAATAAGTTATATTGGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTACCACTTTATTTTTTGATCTAAAATTATA # Right flank : AAATTGTTAAACCTCTCTGATGATTTTAAAAATTTATAGTGGTATAAATTGTTTATTTTATAGCAATAAAAAAGCCCACTTGAATCAAGTGGGCTTTTAGAATTTGGCTCTCCAACCTGGGCTCGAACCAGGGACCTGCGGATTAACAGTCCGTCGCTCTACCGACTGAGCTATTGGAGAATCTGCATGCGATTATAAGGATATATCACGAGTGGTCAAGCCTTTGATGTCATCTTTTCTTCATTTTTGACTTGTATGCTTTTTATTTAAACAAATAAGATCAAAATTAAAAAAATGGATTTGAGTGGTTGCAAAGCGAGAGCTGACTTGTTAGATTAAAAACATAAAGAGCGTTTAAGTTTGACTTAAACCGTGTGGATTTAACCAACTTGCCAGCACTAAAATGGCTAAATAGGAGACAGCGCGATGACGACGCTAACTATTTCTCAAATTTTTGAAAAATTTTCTTTTTATCAAGAAAACTACCTTTCTATCCTGCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 103853-104903 **** Predicted by CRISPRDetect 2.4 *** >NZ_AMFQ01000152.1 Acinetobacter sp. WC-743 ctg7180000004527, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 103853 28 100.0 32 ............................ TTTAGTAAAGTTAATAAGCTCAGGATCAGACA 103913 28 100.0 33 ............................ AGTTCAAATTGCAAACAATCAAGTAGAATCTCA 103974 28 100.0 32 ............................ CAAGACTTCAAGAATGGGTTAAAGGTCTTTTA 104034 28 100.0 32 ............................ AAAAGGCTAAAAGCAAATGAGCGTAGATAGTA 104094 28 100.0 32 ............................ AGTGGCTCAATTGGTTGCTTTGGATTTTACAG 104154 28 100.0 33 ............................ AATTAAGCTTCTGTGGGATTGATACAGATACAA 104215 28 100.0 32 ............................ ATTGCGTACATGTGTTTGTCGCTTGATCGACA 104275 28 100.0 33 ............................ ATGTACACCCTTACAATCTCGGGTGAAAATACA 104336 28 100.0 32 ............................ AAAGACTACAAACCAAGCTGCAGACAATCACA 104396 28 100.0 32 ............................ ATAGCTGTATGAGATGTAGGTAATCTTTCCCA 104456 28 100.0 32 ............................ AAGCGTTTGCAATGTCGTTTGCCATATCCTCA 104516 28 100.0 32 ............................ TGTAGGTGCAGAATATAACCCTGCGCCTGTTC 104576 28 100.0 32 ............................ AACAACGGCAGAATTAGAGGGTACAGCTTTAT 104636 28 100.0 32 ............................ TTTTGGAGTTGTAACGTCGGGAACAATACTGC 104696 28 100.0 32 ............................ AGAAGCACAGGCAATGTATATCAAAGCGCGAG 104756 28 92.9 32 ..................C.T....... TTTCAATAAATAACAACGATCAAAACAATAAA 104816 28 100.0 32 ............................ ATTCATGGCATCGGTTGAAGTTTCAGATACAT 104876 28 96.4 0 .............G.............. | ========== ====== ====== ====== ============================ ================================= ================== 18 28 99.4 32 GTTCACTACCGTATAGGTAGCTTAGAAA # Left flank : ATGTAATAAGGGATTTAAGCGAAATCAGTAGCTTAAAGCCCTTTTTTTATGCGTATAATAATATGTGATAATATCAGCCTACTAGGTTTAAATGGTGAAATTAGCCGATCTAGCCGAATAATTTACGTCAAGATTACGTCAAGCTTTTGAGTTTAAGATAATGAAAATACCAAAACCGATTAAACGTGGTGAAGTTTGTTTTACTAAGAAAATAATGAAATGTAAGATTTCTTCATTTTCTAATGATAAATTAAATGAGTGGCATTAAAAACATGTGTGAATATTGGAAAATCTTTTAGTGATAAGATAAAAGTAGCTGATTTAGAGTATATAGGCTTAATTAATCAAACAAATATTCTAAAATTTTACCCCAATATTTTTTAACTCTTTAACAACTGAATAAAATCAATAAGTTATAATTGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATTATTTTATTTTTTGTTTTAAAATTATA # Right flank : AAAGATTTCTTCATTCGTAATTTGAATTGTTCAAAATTTGATTTATATTCATTTCTGTTTTATTATTTGCTTGGAGACGCCGAGTAGCGGTAACTACCCGACGCATTCTGTTAGTGAGCTGATTGAGAAATCAACAACAATAACAGGATGACAACGATGATTAGACAAAAGCGCATCGTAAACCTCCAAGGATTAATGTAACGAAACACCGTTACAGGTCACCCTAGCCCCAATGACTAGGGCAGGTTACTGTAACACAACAAAAAGCGCCCATGGGCGCTTTTTGTTGTTTAAAGAGATGAGGTTAACTACATCCTATCCAGCGTTTGTCTTCTTCTTCTTCAATTACCATATTCACTTTTTTCACTTTCAATTCAGCGCGATCATTTATTTTATCTGTTTTGTACACTGAGAGACGTCAAGAGAATACCTTTCGTATAATCTGATCATTCTCTAACAAGCATTCACTACCGTATAGGTAGCTTAGAAACCTTACCAAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGTATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: F [matched GTTCACTACCGTATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [86.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 7044-8813 **** Predicted by CRISPRDetect 2.4 *** >NZ_AMFQ01000044.1 Acinetobacter sp. WC-743 ctg7180000004540, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 7044 28 100.0 33 ............................ AGAAGTTACGTTCTTTTTCACGCTGTGATTCTT 7105 28 100.0 32 ............................ TTACTTTTTACGCAATTTATGGACTAGTGCAA 7165 28 100.0 32 ............................ ATTTGTTGCTTGGTTATTGCGAGTTGCTCAAG 7225 28 100.0 32 ............................ GATATCATGACTTTTTTTAAAAAAATCTTGCG 7285 28 100.0 32 ............................ GATTTGACATGCTGTTCCCCTGAATTTAAAAA 7345 28 100.0 32 ............................ TTGAGGGTCATTCTATGAAAGCTCTTGATCAT 7405 28 100.0 32 ............................ TTAAAAATTTGATAAGAGAAAAAAGACAGTGT 7465 28 100.0 32 ............................ AGTCTCTACATTTAACAAACGTCAATTAAAAC 7525 28 100.0 32 ............................ AGACTTAGAAAAATCGGGGGTGGCTGTCTTAG 7585 28 100.0 32 ............................ TTGTAGCTCCAAAACTGTTCGTTTCATGACAA 7645 28 100.0 32 ............................ TTTATAAAGTGATTTTGGTTCTGCTGGCTGAT 7705 28 100.0 33 ............................ AACCCAAGTAAGTGCAGAAGGACCAAGTTTTAC 7766 28 100.0 32 ............................ ATTCAACGATCAACAAAAGTTGCATGGATTCG 7826 28 100.0 32 ............................ TGAATGTAATATGTATACATGTTCAAAGCAGG 7886 28 100.0 32 ............................ ATTTTCTGGTCGGGAAAACGGCATTTTAATAA 7946 28 100.0 32 ............................ AATCTAATCAGAATTTGATTCAAGAATGAAAC 8006 28 100.0 32 ............................ TTTCTCAAATCTTGTTCTGCTCTGCTCAATCG 8066 28 100.0 32 ............................ TTCATCCGTGCATATGTCTGAGGGGCTTCACC 8126 28 100.0 32 ............................ AACACCTAAATCTATTTGCTCTGGGTCTAATT 8186 28 100.0 32 ............................ AAAACTTGCAGTTGCACATCTGCTTTAGCCGC 8246 28 100.0 32 ............................ AATAATATGACTGAGTAATTGAAGCGGATATG 8306 28 100.0 32 ............................ TTGTTATAATAATAAGCAACGCAAAAGCCCAT 8366 28 100.0 32 ............................ ATTTTCAAAATTTAATGTCGCCGTTTTGGTCG 8426 28 100.0 32 ............................ TTGTACAGCTTGTGATTCATCACTATTTCCAC 8486 28 100.0 32 ............................ AGTATGATTTTGAACACCTTGTTCTGATAATT 8546 28 78.6 32 .C...C.G...T.....C.......G.. TATACGTCATGATATTGAGCAAATATTACTCA 8606 28 92.9 32 .....C...................C.. TTGCAAAAGCAGCTTTGGCTAGTGCAATGGAA 8666 28 85.7 32 .....C.G..A......C.......... ATATTATTTTTAGGGGAATAACAATGAATGAA 8726 28 89.3 32 .....C.....T............A... ACTACGAGCTGATAAGGGGATAGACATATCAC 8786 28 75.0 0 .....C.....T...AA.CC....A... | ========== ====== ====== ====== ============================ ================================= ================== 30 28 97.4 32 GTTCATTACCGCATAGGTAGCTTAGAAA # Left flank : TCAAAGTGGCTAGAAAGATTGGTAGACTATGTTCATATCACTCAACCACGAGAAGTTCCAAAAACAAAAATCACTGGATATGCCCATTATTTCCGAATTAATCCAAAAATGACTTTGGAGGAACGTATTGCTCATCAGGCTCAACGACGAAGCATTTCTTTTGATGAAGCTCAACAACATTTTAAGCAATATAGTGAACAACCTGAAATTGTTCCCTATGTCAGTTTAAAAAGTTTAAGTACTAAACGTGAACAAAATATAGATCGATATTATCGGTTATATATTGGGAAATCTGTTGCTGAAGAAGCAAATGATGGAAAATTTGGAACATATGGTCTCAGTAGAACAGCAACAGTCCCCGAATTTTAACCCAATATTTTTCCACTCTTTAACAACTTAATAAAATCAATAAGTTATAACAGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATCACTTTATTTTTTAATCTAAAATTATA # Right flank : ATATAAACGCCTTAACATCTTAGCTAAATTTAGGAAAGTACAAACATATGGAATAATTTTTACAGTAAATAAAATATGATAATTTAAATGATAATTATTTGCATTATTAATTGCATTTGAATATTTGGTAAAATACAATGTGCAACAATTCTTACACAATCCCTCCGTAATTTGAGTTGCGTATTAACATGAATAAACAATTAATACTTCAAGCACTATCTCTCTCCATACTCTCAGCAATGTCAATTTCAACATATGCAAACGAGACTTCAGAAGACTCTTCCAAGCTTAAAACGATCGTCGTTACAGCAAGTAGTCAGGCGGTCGATGTTAAAGAAGCACCAGCCAGTATTAGTGTGATTACCAGTGAAGATATAGAAAAACAACCGGTGGGTAGTCTTGGCGAGTTATTAAGTAAAGTACCTGGGGTTACTGGTGGAATTAGTCCTACCAAAGAAGGCTCTAAAATTAAACTACGCGGTTTACCTGACAATTACACA # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: F [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.10,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-22] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [83.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //