Array 1 33530-32125 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABWGR010000010.1 Lactobacillus delbrueckii subsp. bulgaricus strain CBC-LB69 5CBC_contig_10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================================================================================================ ================== 33529 36 100.0 30 .................................... TTTTTCTTTTTAGACAAAACACTTTTCTTA 33463 36 100.0 30 .................................... AGCGCGTCGTCAATGCCGTTTAGGACCTTC 33397 36 100.0 30 .................................... TTCTTGGCTAAGCATTTGGCAGAGCTAACC 33331 36 100.0 30 .................................... CTACGAGCTGGAGGTAATCTAATGAGCGAT 33265 36 100.0 30 .................................... CTGGCGAAAACTCACCAAAACAACAAGAAC 33199 36 100.0 30 .................................... GCCACCTGGCAGCACCTGGCCACCGCCTTT 33133 36 100.0 30 .................................... TATCGGGGCTGGCTTAAAAAGGGGAGGCAA 33067 36 100.0 30 .................................... TTGTCTATGTGCCTGTCTTGTATGGCGATC 33001 36 100.0 30 .................................... GGTAGTCGCTGGCTGCCTGCCGGGTATCTA 32935 36 100.0 31 .................................... TTTGGCCTTGCCTTTATCTGCTTATATATTA 32868 36 100.0 30 .................................... TGAAGAAACTGAAGAAACTTCAGCCTTTGA 32802 36 100.0 30 .................................... TAGTCTTGGCATTGCGCTCCTGGTACATCT 32736 36 100.0 30 .................................... CGCCGTTCACCTGGTCAGTTGATCACCTTC 32670 36 100.0 30 .................................... AAGGATATTTAGCGCCCAGAGGATCTGGTT 32604 36 100.0 30 .................................... GTCAAGTGAACCCCTACAAGGGCCGCGCCG 32538 36 100.0 30 .................................... ATCGATCACCAGGCGGCCGCTTGCTACCTT 32472 36 97.2 30 ........G........................... TTGAAACCAGCCCCAAATCCGGCCCGCCTT 32406 36 94.4 30 ..........A...............T......... AGGCAAGATCGAAAAGAACAAGGAAGACGT 32340 36 97.2 144 ...................................G CTGCTTGGATGCGTGGATTGAAATAGTTTTATAGGGGTGCTTATTCAATGTTGTCAATTTTCCCGACGTATGTTGGGGGTGGCCATCATAATGGCCTAATACTAAGACGACAATTCTACTCATTCCACGCGGGTGGGGGTGATC 32160 36 75.0 0 ....................TC..C...GAC..AAG | ========== ====== ====== ====== ==================================== ================================================================================================================================================ ================== 20 36 98.2 36 GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC # Left flank : CAGTGAATCTTTACTTCAAAAGTACATGACCAAATTAACTAGTTATGTAGTTGATGAGCTAAGCGCAGATGGCAGAAACAGAATCATTACCTTCTATCGCGATTTACTAAATGCTGTTCAAGACGAGTTGCTTATGGAAGATTTGCCGCTTGAAATAAGTTTTGACACAGACTTGAAGAAACTCTTCAAATTTGGTGGTCTACACTTCAACAAGACACTCACTCGCGATCCATATGGTATAATCGAGACAGTACTTAGGATACATGACAGGTTAGATCTTAAGTCTACTGTTGTTTTTAGTAATGTAGCTCATTACTTAGATGCAGAACAGTTTATAGAAATATCTAAGCTGTGCTTAGAGCTAAAAAAGTCTATCATTTTTATCGAGTTTTGTAGCCATAAGGATCAGGTTGTATATGGTGATGCAAAATTCAGTTATATCGATGAGGACCTTGTTGATTGGTACTAGCCTTATATTAAAGCTGTGTTAAAAAATAACG # Right flank : TGCTTTTCATGATTGAGAAGCACTTTTTTCTGTTGAACACAACAACTTAAAAAAACGTTAAATCAAACGCTTCACCAAGCAAGTAGGAAAAGATTATAGTAAAATACACTGGTTATAAAAAAGTTGAGCCAAGCTCAGCATCCCCAAAACAAAACTTAGTTAAGGAGAATAAACACATGCAAGATATTTATATTGTTGCGGCCAAGCGAACTCCATTTGGCCGTTACCACAAGCAATTGGCTGACTTTTCTGCTATCGACCTGGGCCAAATCGCCCTGCGCGGCGCATTAAAAGAAGCCGGCCTTGACGCCGAAGCCCTGGATGCCCTCTTCATGGGCAATGTCCTGTCTGCCGGCTTAGGCCAAAACATGGCTCGGCAAATTGCTTTAAACTCCGGGATGCGGCAGGACTCAGTCGCCGTGTCCATCAACGAAGTCTGTGGCTCCAGCCTCAAGGCTGCCCGGCTGGCTGAAGCCCAAATGTTAATCGGTGACCTGGGC # Questionable array : NO Score: 5.64 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.52, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //