Array 1 348510-347867 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FVJK01000005.1 Mycobacteroides abscessus subsp. massiliense strain 960, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	============================	===================================	==================
    348509	    28	  96.4	    34	C...........................	CGACTGGTTGATGTGCTCGGGGATGTACGACCTC 	
    348447	    28	 100.0	    34	............................	CGTGTAGGCACCGGATCGTTGCTCCGCCAGGCCG 	
    348385	    28	 100.0	    33	............................	GATCAAGGAGATCGAGCGGCAGCTCGCGCAGAT  	
    348324	    28	 100.0	    33	............................	GCCTGCCGTACCCCAGTCGGCACTGGCATCGCC  	
    348263	    28	 100.0	    33	............................	CGGCACCGACGCGGAGGAGTTGACCGCCGCGGT  	
    348202	    28	 100.0	    34	............................	GCCGGCACGAGTGCAAGACGCCCTCGCTGCGTAC 	
    348140	    28	 100.0	    33	............................	CCCGTCTGACCTACCCCGGAAACGAAGAAACCC  	
    348079	    28	 100.0	    35	............................	GCGCTGGTGTCACCCTGGTAGGTACTGGCGATCAC	
    348016	    28	 100.0	    33	............................	GGACGTCCAAGCCGAGGTGCCGGAGCTCGATCA  	
    347955	    28	  92.9	    33	C............G..............	GATCGCGCCGCAGGACATCTCCGATGACGCGCA  	
    347894	    28	  96.4	     0	..............G.............	|                                  	
==========	======	======	======	============================	===================================	==================
        11	    28	  98.7	    34	ATGCTCCCCGCGCAAGCGGGGATGAACC	                                   	       

# Left flank :   CCACGACCGGTTGGCCGCCGACCGAAGTCGAGCACGCCGAGAGCACCACCGCGGCGGCGATGCCGGCGGCTGCTCCAAGGCGCGTCGTGCTGCTCATACGTTCGATTCTCCCAGAAGACACCGAACAACCCGCCGATGCGCGTGTCACGTCCCCCATCCGGATGCCTTGAGCGCGCGCGGGATTCATCGGTCGGCCAGCTCTGCGAGGCGCTGCTCCACGGCATGGAGGTCGGCCACTGCGGCGGTGAGCTTCGCCTGTTCCAGGAGCTCGATCACGCCGTGCAGTCGGGTGCGGGCTCCTGCGACGTCGTCGTGGACCGAGTCCGTCAGGTTGGTGATCAGCGGTCGGTAGTCGGTGCTCATGCTCGGCACGGTGACACGGCACCGCGGCGAGGTGATGTACGCGGCGCGGGTGATGGCGGGGTACCGGAGGTGAGATCGTTAGCAAGGCACAGGTGTCAAACTGGGCATTCGGGCTGTAACATCCCAGGTCAGGAAGT
# Right flank :  CCCTTGACGACGCAGAGCTGGCGACGCATTGCCTACTGCTCCCCGCGTGAGCGGGTGGGGGTTCCCTCGACAAAGTGCGCCTGCAAACGTGCCGCGTTCATTGGCTTCTCGATGCTGTGCAGTAGGAACCGTTGCGCTGCAGAGGGTTCGGGAAAAGTTGGAACAACATTTCTGATTCTGTCCCAGCCTCGTCGCTGACCAGCGGACTCTCGATTATCGAGACGGATTTCGGGTCTGATCAGGCACGATCCGGCGGCTTCGTTTCCGATGTGTGTCCAATGTGACTGCTACAACTGGAGCCAGCTTCCCCAACCTGACCAGCCAACCGGAGGAGAGACGATGACCACCACCACCACCCGTATCCGCATCGGAACGCCAGCTGTCGCCGAGCAGCTCGGCGTGTCAGACGAGACCGTTCGCCAGGAAATCCAGCGCGGCCGCCTGCCCGCGATCCGCGTCGGCAGAACCTACCGCGTGCTCCAGAGCGACGTCGACGAGTA

# Questionable array : NO	 Score: 6.20
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ATGCTCCCCGCGCAAGCGGGGATGAACC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [3,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGCTCCCCGCGCAAGCGGGGATGATCC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-8.90,-10.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [2-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [30.0-46.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.92   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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