Array 1 123168-124599 **** Predicted by CRISPRDetect 2.4 *** >NC_017134.1 Acetobacter pasteurianus IFO 3283-32 plasmid pAPA32-012, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 123168 29 100.0 32 ............................. CGGTCGATATTAAGGCGGAAGAGGGGGAGGCC 123229 29 100.0 32 ............................. CCGAGGCAGATAGAGCTGTGGAATGTGTCATG 123290 29 100.0 32 ............................. CACGCTCTCCGTGCCTCAAATCCATTGTGAGA 123351 29 100.0 32 ............................. ATAGCGGCACCTGCGCCAAACCCCATTTTCAG 123412 29 100.0 32 ............................. TTCAGCGTTTGGCCATCAGCAAAAACTACCGT 123473 29 100.0 32 ............................. CGGGGCGGCTGTTGGTAATGCAGACAATCCGT 123534 29 100.0 32 ............................. TCGCCCACGGCCTGCCAAGACTTGCTCACTTC 123595 29 100.0 32 ............................. GCGGTGGATAGGCCTTCCATATCTGGCAGGTA 123656 29 100.0 32 ............................. CCCGCGTAGCATGTTTGCGCGTGCACCGCCTG 123717 29 100.0 32 ............................. TCGGGCGTCTGGCCGGTCGCTGAGGCTCTCAA 123778 29 100.0 32 ............................. CCGCCTGACCGTCTGACCTCCTGACCGCCTGA 123839 29 100.0 32 ............................. GCGTATCGGTCACAAATGCAGAACCGGCTGGC 123900 29 100.0 32 ............................. ACGCGCGCGGCGGGTAGTGTAAAGAACAGCGC 123961 29 100.0 32 ............................. CCCCGACCGTTGGCAATATTACCATCACGCCT 124022 29 100.0 32 ............................. ATATTTGGACAGTTCGCCCCGGCTGGTAATGT 124083 29 100.0 32 ............................. TCGCAGCGGAAATCATTGTTGGCAATAATGCC 124144 29 96.6 32 ............................A CGTGGCCCATGCATTCTTCTCTGGTGACGAAC 124205 29 100.0 32 ............................. TAACAACAACCTAGCCGCCGTGGTAAATACCA 124266 29 100.0 32 ............................. CAGCACAAAGCCAGAGACCAGAAGGTTTATGC 124327 29 100.0 32 ............................. ATCTTGGGTTTGTTGACTTCCGGCATCGTGAT 124388 29 100.0 32 ............................. AACAGCCCCGCATACCGGCGCATATTGACGCA 124449 29 100.0 32 ............................. AATTGCCGGGTCTGGCCGCTACCTGCAAACTG 124510 29 100.0 32 ............................. GCTAAAAATGGGTGATTCCAAAACCAAAACTA 124571 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 24 29 99.9 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : TATTGGCTGCTGGTGGAACTGAGGCACCATCCGTACAGCCTGAAGCAATGCCGGTTGCTTTCGCAGATCCGAAAGGTTCGGGTGATGTTGGTCATCGTGGTTGAAAATGCTCCGCCACGTTTGCGTGGGCGGTTAGCTGTATGGCTTCTGGAAGTGCGGGCTGGGGTTTACATTGGCAGTTATGGCCGGCGTGTGCGTGAAATGATATGGGGGCAGGTTTGCGCCTATATTGAAAATGGCAATGCTGTGATTGCATGGGCGGCCCCCAATGATGCTGGGTTTGAATTTGATACCTGCGGTAAGAATCGTCGCGTGCCTGTAGATCTTGATGGCTTGCGTCTTGTTGCTTTTGGGCCTGAAGCCGCTCTTCCTATACATCCTGGACCAACAACGACAATGCTTCCAAGGCGACGTGGAAAAGGGTAATATACCAACTCCATTCAGTTGGTGGTTTCTTTGACAATAGAATAATTCTTTAAAATCAACTATCTTCACGAAGA # Right flank : GACGCCTAACATGTCTAGGTGTTTGGTCCCGGGGTTTGATGGGTTGGATTGATGATGAATCTTTCTGGCTCTGAAGTCCATATTTTGCAGAGGTATTCGTAAGGCGTGAGGCCACTCAGCGTCTTGAGCCTTCGCCCGAAATTATAAGCTGCCATGAAGTCGTTGAGGTGTGTCCTCAACTGCTCATGACTGTCGTAATGGAAGCGTTTGACGGTTGCCTCTTTGATTGTCCGGTTCATCCGTTCAACCTGACCATTGGTCCAGGGATGATTGGGTTTCGTCAGACGATGTTCGATCCCGTGGGCTTCGCAGATCATGTCGAAGCGCATGGGACGCGACCAGGCCGTATTGCGATTACGGGGTTGGTCAGCGAACTGGATCCCATTGTCGGTCAGGATGGTGTGGATCCGGTAAGGGATGATGCTCAGGAGATGTTCGAGGAATTCCCAGGCCGTCTTCCGATCAGCTTTCTCGACCAGTTGTGTGACAGCGAATTTGCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //