Array 1 1429-476 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKRL010000003.1 Clostridium senegalense isolate MGYG-HGUT-01407, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1428 30 100.0 38 .............................. AAAAAAGAATATGAAGATATTAATATTGAAATTTTAAA 1360 30 100.0 35 .............................. TTAAAAAAAGAATGATCTGCATTATTTTCAAATGT 1295 30 100.0 36 .............................. TTCTCTTTTCTTTACCAGTCTTTTGTTCTCTTATAT 1229 30 100.0 37 .............................. AGGATATACTAACTTCTTATATAGAAAAAGGGCAGTA 1162 30 100.0 37 .............................. GTAAGTTCTGCATTTTCTCTAAGTTCTCTATTTTTTA 1095 30 100.0 35 .............................. AATTGCTATGGATAAAATGATACCCGAACTTGAAA 1030 30 100.0 35 .............................. CTTAGTGTAAATACTTCTTTAACTAAATCCGACGG 965 30 100.0 37 .............................. GGATTAAGTAAAGAAAATTTAGGTGAAGAAGTAAAAA 898 30 100.0 38 .............................. TTAGGATAATAGAATTTGAAGGTCATAAAGCTATTTAT 830 30 100.0 34 .............................. GGATATATTACATCTTGAGAGATAAAAGATTCCC 766 30 100.0 36 .............................. AATTGTACCGTTATTAAATGGTTTGTAATAGCTATA 700 30 100.0 34 .............................. CTTTGTAACTCTGTACTTGCTTTAGGATAAATAA 636 30 100.0 35 .............................. TCTATAGTTAACTGATCTATTTTAACTGGATATAA 571 30 100.0 36 .............................. TTTGTAACTTTCATGAATCTAGCGTAGTTACCTACC 505 30 70.0 0 A.....T......G.T.A...G...G..GG | ========== ====== ====== ====== ============================== ====================================== ================== 15 30 98.0 36 GTTGAACCTTAACATAAGATGTATTTAAAT # Left flank : TGATAGTGAATATGATATAACACCACTTACAGGAACAATGTTTACCTACACACATGATATATTCTTTTATTATGCAGTAATAGAAGATAATATAGAAAAAGCAAAAGAATATTATGATAACAACAAAAGTTTTATAGAAAATAGCAAAGCTATAACAAAAGCAAGAGCATTAGCTACCTATGAAGCAAAAATAAATAAAGATACAGAAAAAGCTAAACTAGTATTTAAAGAAGAGTTTGAAAAAATAAAAATAATGAAGATAAGGGTCTAATTACCTTTGAAGAGGAATTTACAAATAAAATGTTATTTTAAATAAAATAATGAATTTTACCAGCAAAATATTCATTAAAAACTTGTAATGCTTTGAAATTACTGAGTTTAAAAGGTGTTTTGCTGGTTTGCTTTAAAAAATAAAAATCACTGGTAAAAAAACAATAAAACCTAGCAAAATCAATAGTTTGGATGTATAATGAAAAATAAAGAATGGCTATTTTTCAATG # Right flank : GTTCATTTTTTTAGAATCATGTAATGGCAAATATTTAATAAAAGTACTAGTGATTTGTTTATTTTATATATAACTAGCCACAAATGAACCTATCCATCTTGTTATGGCATAGAGATTTTTAATCATTGTCCGTTTAAAAGTTTTGATTTAGATTTAAAACTTCTCATTGATAAACGGATAAGTTTTAGAATTACAATCTTATGGCTGGTGCATTAACAAAAATCATAACCTAAAAGTTCTTTCTCTAATTTATCAAAATCATATTTCCTTTGATGAAAATTATTAAATGTATCTTTGTTAGAAGATGAGTTTTTATAGTGCTTTTGCATTATCTTTTTACCGTTAATTTTCCAATTTTTAAGAATACCTTCAACATAGCAAAGTCTAACATTTCCTTTGCTAATTGCTTCTTCCATAGCATCTATAACAGTAAATGTGTCATTATCATCTACAAGCCTATCTAAAGTTAAAATTGC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 1 428-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKRL010000062.1 Clostridium senegalense isolate MGYG-HGUT-01407, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 427 30 100.0 36 .............................. AAGATTATATTTTCAATATCCGTCCACAATTCTTTG 361 30 100.0 36 .............................. TTAGTGTTGTTATCCATGTTAATATATTCAATCACT 295 30 100.0 36 .............................. GATGATAAATTTTGAAAGATTGGAAGAAGGTATTCT 229 30 100.0 36 .............................. ATAACAGAATAAAAAGTTCACAGTCTTTAAATACAA 163 30 100.0 36 .............................. AACTAATCTATCAAATGTCCTTCCGTTCCTATCATC 97 30 100.0 37 .............................. TTCATATACACCTGTTAATGCGTCGGGTGCATCATCA 30 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 7 30 100.0 36 ATTTAAATACATCTTATGTTAAGGTTCAAC # Left flank : | # Right flank : C # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATACATCTTATGTTAAGGTTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 404905-406373 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKRL010000004.1 Clostridium senegalense isolate MGYG-HGUT-01407, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 404905 30 100.0 37 .............................. GAAGTCCAACAAGCAACGTAAATGTTGATGGAACTAA CT [404911] 404974 30 100.0 36 .............................. AAAACCATATGCAATTAAGACATATTCATCAATTTT 405040 30 100.0 36 .............................. TTTTTAGCAAATATTATTGTTGGGTCTATCTTCAAT 405106 30 100.0 36 .............................. GGTTTTTATCATACCTTCTAGTGTTTTCATAGCTTT 405172 30 100.0 36 .............................. TTTAATTATATTTTGTTGTGTTTCTGGATTTAATTG 405238 30 100.0 36 .............................. TCAGACCTTCTCCCTTTAAAAGTTTCATTTTTTATA 405304 30 100.0 35 .............................. TTCTCATTATCTTCATCAGTAGGCTTTCCTCCATC 405369 30 100.0 34 .............................. ACTTTTGCAACTGCTGCTAATAACATTGGGTCTA 405433 30 100.0 35 .............................. GATGAAGTTATGTGCAATAGAATTTCTATTTTACA 405498 30 100.0 35 .............................. GGTAAGATTCTAGTTGCAGGTGACTTCAAACAAAG 405563 30 100.0 35 .............................. GCAATAAGTTCACCCTTAGGGTCATTTATTATTAA 405628 30 100.0 35 .............................. AATAAACAAAGAAGCAGAATACTATAAGGACTTAA 405693 30 100.0 34 .............................. ATCAATTCATCTTCATAAGGAACTCTTATGAATT 405757 30 100.0 34 .............................. AAGGTTTGGCTATAAACGTGAGCGATGTAGCTGG 405821 30 100.0 35 .............................. AAAAATAAAGGACTAAGAGTAAAAGATGCTGATAA 405886 30 100.0 36 .............................. GAATCAACTGGACAAAAACACACAATTAGCTTTAAC 405952 30 100.0 36 .............................. TAGGACAAATAGCGCTGGCGGATTCTGCTGGTGCTA 406018 30 100.0 35 .............................. AGAAAAATAAGAGAATACGCAACTAAAAATAATAT 406083 30 100.0 34 .............................. TTTAGATGATACCATCTTAGGTATAACAATAAAT 406147 30 100.0 35 .............................. GAATCTGTTTATATTGACAATGGAGAGACTCTAGA 406212 30 100.0 36 .............................. GTGTTCTTTCTCTTCGGTTTCAGCAAGATATTTTGC 406278 30 100.0 36 .............................. TATAACTGATTGGACTGATATTGTTTCTTTAATGAG 406344 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 23 30 100.0 35 ATTTAAATACATCTTATGTTAAGGTTCAAC # Left flank : CTAATATTAATGCTGCAGCTACTGGATTTATAGGAATTCCAACTTCTTCATCATGATTTCCAACTGAAGATACTATAATACCTATTTCTTCTGGACTCATACCTAATCTAGTTAAAATATTAAAACAAATACATGCTCCTGTTTGAGCATGCTCTTGTCTATTTACCATATTTCCAATATCATGTATATATCCTGCAATCTTTGCAAGTTCGACTTCTCTCTTACTAAATCCTAAATGCTCTAATATATTACCTGCAGTTTCTGCAACTTTTATTACATGCCCAAAATCGTGTTTTGTATATCCTTTTACACCTAAGTGTCTATCACCTATTTCTATGTAAGTTTTAAATTCTTTATTATTTTTTATATCTTCAAATGTTATTAATGGCATAAACTCACTCCTTATTATAACTATCCACTATTCAATAATCCTGAGTTTATTCTTACCTAAAATATTAGTTTTTATAAAAAAGAAATGCTAAATAAATAAAATTCAATAT # Right flank : CCATTGAAAAATAGCCATTCTTCATTTTCCATTATACACCTTAACCATTGATTTTGCTAGGTTTTATTGTTTTTTTACCAGTGATTTTTATTTTTTAAAGAAAACCAACAAAACACCTTTTAAACTCAGTAATTTCAAAGCATTACAAGTTTTTAATAAATATTTTACTGGTAAAATTCATTATTTTTTATACTTTTTCAATTCAAAACCACTATTCTTTTATAAGTAAAATATATTTCATTCACAATAAAAACCTACTTTGAATTTTTATTTCAATAGTTAGAACATGTGTAAAAATTCACTAAAAATTATTCAAACAAGAATTTTATTTAAATAATAATTATAAAAAAACAAAAGTTATAATAATAATCCTTAGGAATGAAAACTAGATATGGATATATATCCATATCTAGTTTTTATAAAGACATATTAAATATTTTTAGCTACTTCATATGCACTCCAAATAGCATACATAATGTTTTGAACCTTATTAGCATCTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATACATCTTATGTTAAGGTTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [86.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA // Array 2 409904-411376 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKRL010000004.1 Clostridium senegalense isolate MGYG-HGUT-01407, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 409904 30 100.0 36 .............................. CAGCAAACCAATACCAGGGCAAGTGGATTTGTTGAA A [409908] 409971 30 100.0 35 .............................. CTTTTATACCATTTTACATTGCTGGTGGGTCTATT 410036 30 100.0 35 .............................. CGGGACTATCTATTGCAATGTAAACTAGGTCTATT 410101 30 100.0 34 .............................. ATTCCACATTTTCTTATTATTTCTCTAATATAAA 410165 30 100.0 36 .............................. TAATTTTGAAGATGTTGGAATATATAGCTTTAATAC 410231 30 100.0 38 .............................. GCGCCATCTGCTAATATAGGTATATCTTTACCAAGCCA 410299 30 100.0 34 .............................. AAGCACTTATGAACGGTAATAAACAAATGGTTGA 410363 30 100.0 35 .............................. TCACAAGAGTTACTAAATACTCAAGGTTTATTTGA 410428 30 100.0 35 .............................. TGTATAAAGCATTATGGATACTACAAGTATAGGGA 410493 30 100.0 37 .............................. TAGTGCGTTCCATGTACAAAAATGAATCAGGAGAGCT 410560 30 100.0 34 .............................. TTAATAAGGTAGGAATCAATAAGGTGTTTTTAAG 410624 30 100.0 37 .............................. ATTTTACAATAAAAACTATATTTTCTGTTTTCTAAAG 410691 30 96.7 36 ...........................G.. TGCTTATTCAACAATTAAATCTATAGACATAAATTT 410757 30 100.0 36 .............................. ATTACATTATCATTAGGTGTTTTCTTGTTTAATTGA 410823 30 100.0 37 .............................. TAAAAAGATGGTGGGTATTAGGTGCAACAGAACCTTA 410890 30 100.0 36 .............................. TAAATGTAGGGATGATGGATTATTTATTAAAACTTC 410956 30 100.0 35 .............................. TCATAAATAAGACCAAGCTTCTTCATCTCATCTTT 411021 30 100.0 36 .............................. GTTAAAAGTTCTTTGTTTTCCGTATTCGCTTGTTGT 411087 30 100.0 35 .............................. TATTTTCTTTCCCTTCAAAACCATTAACGGAAAAA 411152 30 100.0 36 .............................. TTCTTCTAATCCGCCTCTTCTTCTACGAAGTCCTTT 411218 30 100.0 35 .............................. TTATCAGCTATCATCTTGTACCTATCACTTGAATA 411283 30 100.0 34 .............................. AGGAATTTGAAGAGACTAAAATAAGTATTCCATC 411347 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 23 30 99.9 36 ATTTAAATACATCTTATGTTAAGGTTCAAC # Left flank : CATATAATATTCAGCCTTTTTTAAAGCTTCTAATTGATACATTGTCTCTCTTTCTTCTATCAACTTATAATTATTTTCCTTCCCACCAAATTGTGTAATGATGGTTTTCATAGGCATTTCCATTGAACGATACTTCGTATAGGAAAGTAATCGAAATACATCTACAACATTATAATAACGATGGCCGTTTTTTCCTTTTTCCACTTCAATTAAATGCTCTTTCTCAAAATAGTGAATAGCACTTGTAGTACATCCAAGAATTTCTGCTAAATCTGTAATACTATATTTCATAATTTACCCCTTTCTGCATAAAGTAACTTTAGGTATTTATCGGTAAAATTCTTATATTTTCTACTACTTTAATTATACATTTAATATCCATCATATATTAAAATCTTTTTAAAATAAAAACCTATCCTAAGTATTAAATATAACACTTTAGGATAGGCATATTCTATTTGTTAATAAAATTTATATAATTACTTCATAAAATTAATGTA # Right flank : CCATTGAAAAATAGCCATTCTTCATTTTCCATTATACACCTTAACCATTGATTTTGCTAGGTTTTATTGTTTTTTTACCAGTGATTTTTATTTTTTAAAGAAACCCAGCAAAACACCTTTTAAACTCAGTAATTTCAATGCATTACAAGTTTTTAATGAATATTTTATTGGTAAAATTCATTATTTTTTATACTTTTTCAATTCAAAACCACTATTCTTTTATAAGTAAAATATATTTCATTCACAATAAAAACCTACTCTAAGTCTTTTATTTCATCAGTTAGAATAGGTTGGAATTTTAATTCACTTTATTTATAAATTATTTCATTAATATTATAAGTTTAACTTTATTATTAAAATATCATTATGTTACTTTTAATCATCCTTCAAATAAAATTTAATACATCTTACAATTAATTTATTTTTGTTACTTTTCCTATTTTTAATCCTTTTGCTATATCACTTATGGAGATATTATAATTAGTAGAACTTAAAGTTCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATACATCTTATGTTAAGGTTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA // Array 3 423005-424348 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKRL010000004.1 Clostridium senegalense isolate MGYG-HGUT-01407, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 423005 30 100.0 35 .............................. ATTAATTTATCCATTATTCTAAAAGCAATTTCAGG 423070 30 100.0 36 .............................. AGATTTATTTATCTATAAATCCAACAGAAGAAGATA 423136 30 100.0 35 .............................. GAAGGAGAAAACACAAACATATTAGCTAGAGCAAG 423201 30 100.0 36 .............................. TCCATACCATTATTTATATACAGAATATATAATAGA 423267 30 100.0 35 .............................. CTCATTTTATTCGTTACATATACCATAGCTGAAAC 423332 30 100.0 34 .............................. TTTTCCTTAAACGATATATGCATTCTTTCACTCA 423396 30 100.0 34 .............................. CTAATATCAAAAGGGTAAAAATGCAAATAGATTT 423460 30 100.0 35 .............................. ACTAAATTAGTATTTGTACCTCGTAAAATAGTTTC 423525 30 100.0 36 .............................. TATAGGTTCTTTTTTATTGTCTTTTATTATAACAAA 423591 30 100.0 37 .............................. TTAATGCCTTTAAATTATTTTCATCTACATTTTTTAT 423658 30 100.0 35 .............................. TTAAGAAACATTGTTAATTGATAAATAGTTTTTTG 423723 30 100.0 38 .............................. TTGTATTGTGCTTTTGGTATAAAATCCGTGTGAATTTC 423791 30 100.0 36 .............................. GCCAAAATATATTATAAATTTTGATGAATTAACAGG 423857 30 100.0 36 .............................. TTCTTTATTTTCTTCATAACATGCATTTCTATCTGC 423923 30 100.0 36 .............................. AGATTTAGATATGTTTTTACTTTACTTTAAAGAGAG 423989 30 100.0 35 .............................. ATACCTGCTACTCCAGCCATAGCACCTTGCATTGC 424054 30 100.0 35 .............................. TTATTATCTTCTCCTTCTGCAAACTCCCTAAATGT 424119 30 100.0 37 .............................. TTTTCAAGGAATCAGATATACTATATTTCAAATTAAA 424186 30 100.0 37 .............................. AGCAATTAGATTAGTTGCATAAGTGTGTCTTAATTCA 424253 30 100.0 36 .............................. TTTAAAAGATGAAGAAGGTAATACTTGTAAAATGAA 424319 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 21 30 100.0 36 ATTTAAATACATCTTATGTTAAGGTTCAAC # Left flank : ACATCTTATGTTAAGGTTCAACAAGCTTGGCGTATATCTATCTGATTGTATATAGTTGATTTAAATACATCTTATGTTAAGGTTCAACTTCCATATCACTCAACAACTTATTAATTTCCTCGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAGTTATAAGTGCAGTAATAGATGTAATAGGTGGTG # Right flank : CTCATCTGCTAACCATGTTGCTTCTGGATTTACTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATACATCTTATGTTAAGGTTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [40.0-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 4 425192-425683 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKRL010000004.1 Clostridium senegalense isolate MGYG-HGUT-01407, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 425192 30 100.0 37 .............................. ACAGTTATAAGTGCAGTAATAGATGTAATATGTGGTG 425259 30 100.0 36 .............................. ATAGGTGTAATATGGATAACTTGTACCACTAGGTAC 425325 30 100.0 36 .............................. ACTATCTATTTCAGCCAAAAATACTTTTTCTTGAAT 425391 30 100.0 36 .............................. TATAACTGCAGGTAGTGGAACTCATGGAGTATGCTG 425457 30 100.0 37 .............................. GCAAATTTTTTATTATTCGTCTTTATAAATTTCTTAA 425524 30 100.0 35 .............................. ATTAATTTATCCATTATTCTAAAAGCAATTTCAGG 425589 30 100.0 35 .............................. ATTAATTTATCCATTATTCTAAAAGCAATTTCAGG 425654 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 8 30 100.0 36 ATTTAAATACATCTTATGTTAAGGTTCAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTACCAGTTGAAGTTACAATTAATAATGCAAAACATT # Right flank : CCATTGAAAAATAGCCATTCTTCATTTTCCATTATACACCTTAACCATTGATTTTGCTAGGTTTTATTGTTTTTTTACCAGTGATTTTTATTTTTTAAAGCAAACCAGCAAAATACCTTTTAAACTTAGTATTTTCAAGGCATTACAAGTTTTTAATGAATATTTTGCTGGTAAAATTCATTTTAATTTCTTATCTTTACAACTAAATAATCAAATCTTCACCAGTGTTATTAAGTTGAATGCCTAATATTTCTTCTTCAAATACATTTTCGTTCATAAGTTTTATTATACAAATAAAATCTTCCTCTTTATTTATAACCCTATTTAAGTCTTTTCTTAAAGCTATTAGCTTTGATGGTATTATTTCTCCTCTAAATACTGATTTTTGGAAATGAGATAGATATTTCTTGCATACTTTAAAAACTCTTTGTACTCGTTTCTCGTTAACATCATAAAAAACAAATGCATAGTTAAAATTAATGTTCTTACCCATTTTACAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATACATCTTATGTTAAGGTTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [45.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA //