Array 1 85059-81857 **** Predicted by CRISPRDetect 2.4 *** >NZ_RXHJ01000008.1 Corynebacterium sp. YIM 101343 Scaffold6_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 85058 29 100.0 32 ............................. GAGTGGCAGAAGACCACCCGCTACCAGGACTT 84997 29 96.6 32 ............................G GTCTCGGATGTGCTCTCCCCGCTGACCTCCCG 84936 29 96.6 32 ............................G GCAAGTCCGTCCAGATGGTCGTGCAGGACCAG 84875 29 100.0 32 ............................. GGTCGCCAGGGCAGCGTCGTTGTCGTCCTCCA 84814 29 100.0 32 ............................. GCTGCCTGTAGCCGTTCGATATGCTCGGCCTG 84753 29 96.6 32 ............................G CGGTGGATGGCGACGCCGATGACGGCGATGAT 84692 29 96.6 32 ............................G GGTCATTGATTCCACCGAGTGGGTGGGGGACC 84631 29 96.6 32 ............................G TGACGTCCTCGATGCCCGCCGCTGACTCCAAA 84570 29 100.0 32 ............................. CGAGAACTACCGCATTTTGAATGCGGGGCCTC 84509 29 100.0 32 ............................. GTGCGTCTCGCTGCCGCCGCCCCGGACCTTGC 84448 29 96.6 32 ............................G GAGGAGCCGTGGCAAAACGTTCTCGAATCGAA 84387 29 100.0 32 ............................. CTCGGGTCAACCCCCAGGGCGAGGGCAATCTC 84326 29 100.0 32 ............................. ACATCCCGAGGAAGAGGGCGAGCCAGAGGCCG 84265 29 96.6 33 ............................A GGTTGCGCCCCAGAATCTTCCGTGATACGGCCT 84203 29 100.0 32 ............................. CCGGAGCCTTGCTGTATCGGCCACGATCACCA 84142 29 100.0 32 ............................. TTCTCCGAGGCATACTCCTCTACTGGCCAGGC 84081 29 100.0 32 ............................. TGCACCTCCTGCTACAACACCTCCTACACCCG 84020 29 100.0 32 ............................. ACCTTCCCCCTGCAGCCTCCGAAGTCGACCGA 83959 29 100.0 32 ............................. GGTAAGACGCACGTCGCGAAGGTCATCATCAA 83898 29 100.0 32 ............................. GGAACCGTCTACTCCGAGGGGGTCCACTACTT 83837 29 100.0 32 ............................. GGCTTCAGCCAGGAGGTCGTAGTTCTCGTTGA 83776 29 100.0 32 ............................. TTGGCGTACGGCTCGGTTTTGTCAACCCCGAT 83715 29 100.0 32 ............................. TCATCTTCCAACTGCTGCCGTGCACGGGCCTC 83654 29 100.0 32 ............................. TGCTCGTCAGTGATGTTAGCCATTGTAGGGCA 83593 29 100.0 32 ............................. GGCGTGACCCTTGTCGGCACCGGTGTGAAGGT 83532 29 100.0 32 ............................. GGTCCCTGACCTCTAAGGGCCTGGACTGTCCC 83471 29 100.0 32 ............................. AACTCGCAGAAGTGCTTCTCCTTCGGCCTGAC 83410 29 100.0 32 ............................. GAGAACGGACAGCCTGAGAATGTTGACGAGGT 83349 29 96.6 33 ............................A CCGGGGGCGCTGGGGTCGTCGTCATCGTCATCG 83287 29 100.0 32 ............................. TTCCAAGATCGCGCCGGGAATTACCCAGGCGA 83226 29 100.0 32 ............................. TGTTGGAGTCGGCCGCGGAGTGTGACGACACG 83165 29 96.6 32 ............................T CGTGTTGCAGCCCTGCAGTTCTAGGAGAGGAG 83104 29 96.6 32 ............................G GTCTTGTAGCCGTAGTAGAACGAGCCATCAGC 83043 29 100.0 32 ............................. GTGTGCATGACCGTCCCCATGAACCGGGGAAC 82982 29 100.0 32 ............................. GACTTCTCCGTGGCGGATCTTCTGCGGACAAT 82921 29 96.6 32 ............................G CAAAGAACTTGTGGCTCACCCCGACGAAGATC 82860 29 100.0 32 ............................. TTCTCCGGGGTGATCTGCCAGCACCTTCCACG 82799 29 100.0 32 ............................. CAGGCATCCGCTGGGTTCGGTGCTGTCACCAC 82738 29 96.6 32 ............................T GAAAGCTGGAATGGTAGCTATGACTCCTAAAA 82677 29 100.0 32 ............................. GAGATCGAAGACTGGGGCATCAACGCCATCGA 82616 29 100.0 32 ............................. CGCCTGCGCCGTCATCATCAGCGACGCACCAC 82555 29 100.0 32 ............................. CCGCAAACACCGCATTTTGAGTGCAGCGGCTA 82494 29 100.0 32 ............................. CTGCTGATCTTTGACTCGATGACGGAGCTGTG 82433 29 100.0 32 ............................. CTTTGGTTCGCGGACAGTGGGGGCTTCGTGAA 82372 29 96.6 32 ............................G CCTTCCCCATGACCGGCCCCTAACTTTCCTGG 82311 29 96.6 32 ............................T GAGTGACCGCATGATGACCGTGGCCGAAGCAC 82250 29 96.6 32 A............................ TGGGAAACCGAGTTCTCCATCAAATGGGGTGC 82189 29 100.0 32 ............................. GATCTTCTCCACCGACTTCGGGGTGACGGCTC 82128 29 100.0 32 ............................. ACATCACCCCTGATGACGCGGTGGAACTCACT 82067 29 96.6 32 ............................G GTGGTGTTGTCGATGAGGAAGGTGTCCTCGTT 82006 29 96.6 31 ............................G CTGATCATCAACCAGTTACCCGGGGTGCGCG 81946 29 96.6 32 .........................C... TACATGATCGGCACCACCCACCGAAACATCGA 81885 29 86.2 0 ......................CA.G..G | ========== ====== ====== ====== ============================= ================================= ================== 53 29 98.6 32 GTTCTCCCCGCGCAGGCGGGGATGGTCCC # Left flank : TTTCTGGGCTGACATCATCCAATTGTGGGACGGCGGTGATCGCCAAGTCGCTGGCGGCACCAACTACGAGCAATCTGATGAGCAAGGAGAGTTCACTTCGGAATGATCACCATCGTGCTCTCCTCTCCGCCCGCCAAGCTGAGTGGCCATCTGACCAGATGGTTAATGGAGATAAACCCCGGGGTCTACGTGGGCAAACCCAGTGCTCGAGTACGTGATGAGCTATGGACTCTGATAATCAGCACACTCACCAACGGGCGGGCGATCATGACCTACCCTACCCGCTCCAACGAGCAGGGTTTCGAAGTCCGGGTTCATCGCAGCCAATGGGAGCCAACCGACTTCGAAGGGATTACTCTCATGCGCCATCCGATCACCACCGCCAAGGGTTCCATGAAAGCCGGCTGGTCACAGGCGTCCCGACAGCGAGTCACACGTCGACGCCGAACAAAGTGATGTAAAATTCCGCATGGACCAACTATTTTCCCTGGTTAATTAGT # Right flank : GACGTTCCCCCACGAACCGATCACCTGGGAGCGTGCGGAGCGGCGGGGGACGGCCGCTACTACACCAGCAGGCGGGAGATCTTCGCGGCTGTCTCAGCCACCAGATCCCCGTAGTCCTGCCCGATGCTGCGGACCACGCGGCTGAGGGGGGCAGCCAGGCACACGACGCCGACGATTTTCCCGTCGACAATGACGGGGGCGCTGACCGAACCGACGCCGGGGACCCGGTTGCCCTCGGACTCGACCCAGCTGTGCTGGCTCAGCTGCTTCTCCGCCTCCGGGGTTCCAGCCAGAATCTGTCCGGCGGAACCTGCTGGCAGGGGCAGCCGGGAACCCTGCGGCAGGGTGACACGGAGTTCGTGGGGGGCGTCGATGGAGACGCGGCACACGCGTTCATCGCGGTAGCGCACCCACAGCTGGACGGATTCCTGGGCCCGGGAGGCCAATTCCCACAGGGGCTGGTAGCTGACCGCGTCGCGGTAGGTCTGCAGGATCCGGGT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTCCCCGCGCAGGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCTCCCCGCGCAGGCGGGGGTGGTCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.70,-13.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //