Array 1 968953-969815 **** Predicted by CRISPRDetect 2.4 *** >NZ_STGB01000001.1 Roseomonas sp. AR75 AR75_ctg0001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 968953 37 100.0 32 ..................................... CAGAGACGTAGAGGAACCGTCGACCTTGGTGG 969022 37 100.0 31 ..................................... CTACGGTAAGCGCGTTCCGTACCGCACAGCG 969090 37 100.0 32 ..................................... GATTCGTGCGCCGGAAGTACTCGCGAACCTCA 969159 37 100.0 33 ..................................... TGCCTCCTCCCCCTGACGCATGATGCCAAACAT 969229 37 100.0 31 ..................................... ATATGCCAGGCTTACCTGCAAAAGAACTGAT 969297 37 100.0 37 ..................................... AGCAGCGCACCGATGGGGGCCGAGAATGCGAGCACGA 969371 37 100.0 31 ..................................... CAGCGCGCGCGGCGAGGCGGTCATCGGCAGG 969439 37 100.0 30 ..................................... CCACCCATCGCGCTCCGGGTTCTCCGGCAC 969506 37 100.0 31 ..................................... CCGCCTCCCTCGTTCAGCAGCGCGCGGATGG 969574 37 100.0 31 ..................................... GCAACGTCTTGGTGGTGCCGCTCCCCTTGGG 969642 37 100.0 31 ..................................... TCGCCGTCAGTCCCGGTAAAGTCGTCGGTAA 969710 37 94.6 32 ........................T........C... GGAGCGAATGCCCGTGGTGACGATCCACACCG 969779 37 86.5 0 G......A...........A...G..........A.. | ========== ====== ====== ====== ===================================== ===================================== ================== 13 37 98.5 32 CTAATGCGGCCTGTTCCATGAGTACGTGGATTGAGAC # Left flank : CCAGGGCGGTAGGCGAAGCTGGAATCCTCGAATTCGGCGTCCAGCAGGGGGGTGAGCACGATCGCCACCGCGGCCTGGGCGATGCGGTCCTGGACGGGCGGGATATCCAGCGGCCGGACGCCGCCATCCGGTTTGGGGATGAAGACGCGGCGCGCGGGTCCTGGGCGGTAGCGCCCGTTGCGCAGGTCGTGCGAGAGGCGGGACAGGCGGCCATGCGCGGCCGGTGCGTAGCGGGCGACGGTCATGCCGTCCCCGCCGGCGGCGCCGTTGTTGGCCCGCACCTTCTCCCAGGCGAGCCACAGTGTGGCGTGTCGGGTGGCCCGGTCGAACAGGCTGTCCGGCGGAAAGCGCGGGCCGGGCAGATAGGGCTGTGCCAAAGCCTCTTTCGTGGTGTTCTCCACGGACATGCTCATTCCTTCTGAGATCTGGCCCCAGGTCGCCGGGAGAGTGGAAAGTCTTGCTCATGGCATCAGCCTTGACAAGTGTTTGGCAGAGGGGGA # Right flank : CGTCCAGCTATTCGGCCAGTCGCCCATGCCGACCGACAATTCTGCTCGCCTTAGCACTGATGCCGAGGTAAAGGCGGTCAAGAAACGGACGGCAGACATGCTAAGATCATTGGTTGCATGAGCTCAGGGAGCGGCATCGCGTTCACCGCAAACCCATGCAGTCGCGCCCCTCCCCGGAGACCTCCGCAGACTGGGAGATTGATGCATCACGCCAAATACCCTGGCGTTGTCTGGGACAATAGGAGGCGGCCCGCGACCAGCATGATCGTGGGCCGCTATCCGGCGCATCTACTTCTCCAGCAGCAGCGTGTTGCCTTGCCGTCTGTTCCTCGATTGTGAATCTTGCGCAGTATGGGCAACCATGCTCCTGCGTCCGACTGCTGCCGACCCGCCGCTGCGGGGGGAGCGCTGCCCCACAGCGGTCCGGTATCCCCGGCTTCTCTCGCGCCGGCGCTGCCGGACTTGGCGGCTGTGTCGCGGCCGAACGCGCAGAGACCGAC # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTAATGCGGCCTGTTCCATGAGTACGTGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.40,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 977674-979015 **** Predicted by CRISPRDetect 2.4 *** >NZ_STGB01000001.1 Roseomonas sp. AR75 AR75_ctg0001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================== ================== 977674 37 100.0 32 ..................................... CAGGCGTAGCCTCCGTCCATCTTCACATGGAT 977743 37 100.0 32 ..................................... TTCAGTGGCGCGATGAGCATGAGGCCGCACAG 977812 37 100.0 32 ..................................... CAGCCGGCTAACCGATCGGCGCCGCATCGCAC 977881 37 100.0 32 ..................................... AATGGGAATGGCCATTGGTGCAAGCCGCGGTG 977950 37 100.0 34 ..................................... CATGGTGCTGTCGTAGATGTCCGAACCGTAGAAC 978021 37 100.0 30 ..................................... GAAGCGTCGAAGCCTCCGCCGCCGAAGATG 978088 37 100.0 32 ..................................... CCTGTCGGGAGTGGATGAGCGTCCCATGCGTA 978157 37 100.0 32 ..................................... CAGAAAGAACTGATGCTGCTGCCTACGGCTGC 978226 37 100.0 31 ..................................... GGAAAGAACCCCGTTCACAATATGCGCCCAC 978294 37 100.0 33 ..................................... CGGGCGCGCCGGCGGTCTTCTGGGCGATCGAGG 978364 37 97.3 33 ..............................C...... TCCAGTCCGAGAGAATGTGCTCAACGACGATGT 978434 37 100.0 31 ..................................... CCAAGCGCAACCGTAAAAAGTTTCGTCAGCT 978502 37 94.6 33 .....T...............A............... CGAGAGTCACTCACCAGAGGGCCGGTAGCTGCT 978572 37 100.0 30 ..................................... GCATCCCGCTCCGCCTCCGCCCGCCGCAGC 978639 37 94.6 31 ............A......................G. GATGGTGTTCTTCGCCGGGTTGCGGCCCTTG 978707 37 97.3 31 .............C....................... GCTCATGGCGTCGGCTCCGATGCGAGCGCGG 978775 36 94.6 32 ......................-.G............ ATGGCGTTCAGGCCAGCGAGGAGGCCCGGATC 978843 37 78.4 31 ............TCC..AA..........CC..T... GAGATTGCGCGGACGTAGGTGTCCTTGGCGG 978911 37 94.6 31 ...T......................T.......... CGCACGAACGCCACGAACGCCCGCTTTCCGC 978979 37 81.1 0 .......GA...A...A........C..A....G... | ========== ====== ====== ====== ===================================== ================================== ================== 20 37 96.6 32 CTGATGCTGCGTGTTCCGCGCGAACGCGGATTGAGAC # Left flank : CGCCGCCGAAGACGCACTCGTAGTCCGGGTGCCGGCCCGACAGGAAAGTCAGCGCCGGTCCCGCCGCGGCGAGCAGCGTGAGCGAGGAGCCACGGATGACGGAAAGCGTCGTCGTGTCCTCCAGCGTCTCGGCGAAGTCCACGCCTTCAAGCCAGAGCAGATGATGCGTCGGGGCGGACATGCCTCTCCCAATGTCGGGCCCCGGTATCGGCCGGCGCCTGGCGCCCGCCTTCGGTGCTTTCACCGCCGTCGAGCGCCATCCACGAGGTCCGGCGCCGGCCAACCGATCCGAGGTCGTTACATGATGAGGCTAGGCAGGTCCGGCCATCCGACGCAACGAAAACCTCGGGTCCGCAGGACGGCGCGATCATAAGCCGCTGCGTTTCTTGAGGCATTTTCCACGCATATATGCTATGGTTTGCCATTGATGAACGGATTGCGCTGGATAGTGGAAACTGTTCGACTCGATAGCGCCTTGACAAGGGCTTGCCATCGGGGGC # Right flank : CCTCAGCCCCCGGGCTGATATCGGGGTTTGTCTGCTGATTCTGTCCACTTCGCGCGGCGACGGATCAGGACAGCGCAAGGCTTGTTCTTTGCGTCACCAATGGCCGTTTCTTACCATCTCGCGAACGCTCCGGCGGCAGCGCCACGAATATGAAGCCGACGAACGGCGTGCTGCGTCGTTCCAGACGCCGCCGCGGCGGCGCCGAGGAACTCCGCGCTACCGTCCGCCCAGCGCGGGCTCCAGCGCCGCCAGCAGGTCCGGCTCCGGCAGCACGCGGCCCACCCCCCAGAAGCCGCGCTGCGGCAATGAACCGCCACGCCAGCCGCCCGGGAAGGCGCGGTTCAGCGCCGCCACAGCCCGCCCGTCCCCGAAGAATTGCGGCCCGGACGGCGTCAGCAGAAGCACGTCCCGCGTTGCATCATCCAGGCCCAGCGCCAGGGGGTCCATCACCGTGGCGCTCCGCCCGTGCGGCAGCGTCACGACCAGCAGCCGGCCGCCCA # Questionable array : NO Score: 3.09 # Score Detail : 1:0, 2:0, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGATGCTGCGTGTTCCGCGCGAACGCGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-9.70,-9.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-24] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //