Array 1 47408-47196 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV817226.1 Corynebacterium sp. HMSC077D10 Scaffold418, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 47407 29 96.6 32 N............................ ATCTCCGCTACAAGCTCATTGAGTTTCACGAG 47346 29 100.0 32 ............................. GGATACCGCCGCTTCGAGCGATCATGCGCCAA 47285 29 100.0 32 ............................. GCGTTATACGGTGCTAGGGGTAAGTGAGCTTA 47224 29 96.6 0 ............................N | ========== ====== ====== ====== ============================= ================================ ================== 4 29 98.3 32 GTGCTCCCCGCGTGAGCGGGGATGAGCCG # Left flank : CGACGGTGCTCCCCGCGTGAGCGGGGATGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCCCCGCGTGAGCGGGGATGAGCCCCGTCGCGGGCACCTACGACTTCGCAGGTGTCGGTGCTCCCCGCGTGAGCGGGGATGAGCCCGTACCGGGTTGAACCGCCAGCAAGGCCCAGTAGTGCTCCCCGCGTGAGCGGGGATGAGCCTCCGGGTGAGCACATGACGCAGGGGGTGGGGTTGTGCTCCCCGCGTGAGCGGGGATGAGCCGTCGCCACCCGTATCTATACGCATATATCCACCGTGCTCCCCGCGTGAGCGGGGATGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTCCCCGCGTGAGCGGGGATGAGCCCCATGCCCCGGACGGTCGCCCGTGAGCTGCGGCGTGCTCCCCGCGTGAGCGGGGATGAGCCCCTTGCCAACCGCCTTATGAAAAGAAACCTTGGGAACTTCCCACATGCGCGGCGATAATGGTGCTCCGCCTACAGCGCCGCCAACGCCTCGCCCACGCGCTTGCCGGAGTGGATGCAGCCGCCCAGGAACGTGCCTTCCAGCGCGTTCTTGCCGTGCATGCCACCACCGCCGAAGCCGGCGGCCTCACCGCAGGCGTAGAGCCCCTCGAGCACGGTGCCGTCAGCGTGGAGGCAGCGGCCGGAAAGGTCGGTTTCGATGCCGCCCAGCGTCTTGCGGGTGAGCACCTTGAGGCGCACGGCGATAAGTGGGCCC # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 47717-47505 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV817226.1 Corynebacterium sp. HMSC077D10 Scaffold418, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 47716 29 96.6 32 ............................C GTACCGGGTTGAACCGCCAGCAAGGCCCAGTA 47655 29 100.0 32 ............................. CCGGGTGAGCACATGACGCAGGGGGTGGGGTT 47594 29 96.6 32 ............................G TCGCCACCCGTATCTATACGCATATATCCACC 47533 29 93.1 0 ...........................NN | ========== ====== ====== ====== ============================= ================================ ================== 4 29 96.6 32 GTGCTCCCCGCGTGAGCGGGGATGAGCCT # Left flank : GACTAGTGCTCCCCGCGTGAGCGGGGATGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTCCCCGCGTGAGCGGGGATGAGCCCGTCGTGCCCTTGTTTTTCCCGTCAAGTCGGCAGTGCTCCCCGCGTGAGCGGGGATGAGCCCGGCTAAGGACGCGGATTACCTTGAGCGCACACGTGCTCCCCGCGTGAGCGGGGATGAGCCGTGACGATGGATACCGACCCGGCGGTCGCGACGGTGCTCCCCGCGTGAGCGGGGATGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCCCCGCGTGAGCGGGGATGAGCCCCGTCGCGGGCACCTACGACTTCGCAGGTGTCG # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTCCCCGCGTGAGCGGGGATGAGCCGATCTCCGCTACAAGCTCATTGAGTTTCACGAGGTGCTCCCCGCGTGAGCGGGGATGAGCCGGGATACCGCCGCTTCGAGCGATCATGCGCCAAGTGCTCCCCGCGTGAGCGGGGATGAGCCGGCGTTATACGGTGCTAGGGGTAAGTGAGCTTAGTGCTCCCCGCGTGAGCGGGGATGAGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTCCCCGCGTGAGCGGGGATGAGCCCCATGCCCCGGACGGTCGCCCGTGAGCTGCGGCGTGCTCCCCGCGTGAGCGGGGATGAGCCCCTT # Questionable array : NO Score: 5.69 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGAGCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 48086-47874 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV817226.1 Corynebacterium sp. HMSC077D10 Scaffold418, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 48085 29 96.6 32 N............................ GTCGTGCCCTTGTTTTTCCCGTCAAGTCGGCA 48024 29 100.0 32 ............................. GGCTAAGGACGCGGATTACCTTGAGCGCACAC 47963 29 96.6 32 ............................G TGACGATGGATACCGACCCGGCGGTCGCGACG 47902 29 93.1 0 ...........................NN | ========== ====== ====== ====== ============================= ================================ ================== 4 29 96.6 32 GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTCCCCGCGTGAGCGGGGATGAGCCTCTCAGTGAGACGTGAGACTTCAGTAAGTGCACGTGCTCCCCGCGTGAGCGGGGATGAGCCCTGGAGGTTTAATCATGGGTTACTTTGAACCGTGTGCTCCCCGCGTGAGCGGGGATGAGCCCTGGGAGCGACGGCTAGGCGAGTTGTCTAACCGGTGCTCCCCGCGTGAGCGGGGATGAGCCGGTCGAGCTGGGAGAAGTCGAGTACGGTCTCGAGTGCTCCCCGCGTGAGCGGGGATGAGCCTTCCCATCGTGAGAACAGCACCAAACATGACTAGTGCTCCCCGCGTGAGCGGGGATGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCCCCGCGTGAGCGGGGATGAGCCCCGTCGCGGGCACCTACGACTTCGCAGGTGTCGGTGCTCCCCGCGTGAGCGGGGATGAGCCCGTACCGGGTTGAACCGCCAGCAAGGCCCAGTAGTGCTCCCCGCGTGAGCGGGGATGAGCCTCCGGGTGAGCACATGACGCAGGGGGTGGGGTTGTGCTCCCCGCGTGAGCGGGGATGAGCCGTCGCCACCCGTATCTATACGCATATATCCACCGTGCTCCCCGCGTGAGCGGGGATGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTCCCCGCGTGAGCGGGGATGAGCCGATCTC # Questionable array : NO Score: 5.69 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 48517-48244 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV817226.1 Corynebacterium sp. HMSC077D10 Scaffold418, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 48516 29 100.0 32 ............................. CTCAGTGAGACGTGAGACTTCAGTAAGTGCAC 48455 29 96.6 32 ............................C TGGAGGTTTAATCATGGGTTACTTTGAACCGT 48394 29 96.6 32 ............................C TGGGAGCGACGGCTAGGCGAGTTGTCTAACCG 48333 29 96.6 32 ............................G GTCGAGCTGGGAGAAGTCGAGTACGGTCTCGA 48272 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 98.0 32 GTGCTCCCCGCGTGAGCGGGGATGAGCCT # Left flank : GGTTCGTGCTCCCCGCGTGAGCGGGGATGAGCCCATCGGTGCTCGATCAGGCCCGCGACATGCACGGTGCTCCCCGCGTGAGCGGGGATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTCCCCGCGTGAGCGGGGATGAGCCGAAGCTGCTTCGCGAGAACACCGCAGACTGGGGGTGCTCCCCGCGTGAGCGGGGATGAGCCGAAAGCCGCCGACGCCGCGAACTCATTAGCGAAGTGCTCCCCGCGTGAGCGGGGATGAGCCGATGCGCTGCCACGTCACGTCGTTGATGTAGAAGTGCTCCCCGCGTGAGCGGGGATGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : TCCCATCGTGAGAACAGCACCAAACATGACTAGTGCTCCCCGCGTGAGCGGGGATGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTCCCCGCGTGAGCGGGGATGAGCCCGTCGTGCCCTTGTTTTTCCCGTCAAGTCGGCAGTGCTCCCCGCGTGAGCGGGGATGAGCCCGGCTAAGGACGCGGATTACCTTGAGCGCACACGTGCTCCCCGCGTGAGCGGGGATGAGCCGTGACGATGGATACCGACCCGGCGGTCGCGACGGTGCTCCCCGCGTGAGCGGGGATGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCCCCGCGTGAGCGGGGATGAGCCCCGTCG # Questionable array : NO Score: 5.88 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGAGCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [41.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 5 48827-48676 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV817226.1 Corynebacterium sp. HMSC077D10 Scaffold418, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 48826 29 96.6 32 N............................ AAGCTGCTTCGCGAGAACACCGCAGACTGGGG 48765 29 100.0 32 ............................. AAAGCCGCCGACGCCGCGAACTCATTAGCGAA 48704 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 98.9 32 GTGCTCCCCGCGTGAGCGGGGATGAGCCG # Left flank : TGTGGGGTGCTCCCCGCGTGAGCGGGGATGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTCCCCGCGTGAGCGGGGATGAGCCCCACGGGCGGCACGGGCTCCCCCGCGCGGATCGGTGCTCCCCGCGTGAGCGGGGATGAGCCCTAATCCCCAACAGTTGCGTAATTACGGCAATGGTGCTCCCCGCGTGAGCGGGGATGAGCCCATCGTGTGAGCTAGCAGGCTCACCTTGGGTTCGTGCTCCCCGCGTGAGCGGGGATGAGCCCATCGGTGCTCGATCAGGCCCGCGACATGCACGGTGCTCCCCGCGTGAGCGGGGATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : ATGCGCTGCCACGTCACGTCGTTGATGTAGAAGTGCTCCCCGCGTGAGCGGGGATGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTCCCCGCGTGAGCGGGGATGAGCCTCTCAGTGAGACGTGAGACTTCAGTAAGTGCACGTGCTCCCCGCGTGAGCGGGGATGAGCCCTGGAGGTTTAATCATGGGTTACTTTGAACCGTGTGCTCCCCGCGTGAGCGGGGATGAGCCCTGGGAGCGACGGCTAGGCGAGTTGTCTAACCGGTGCTCCCCGCGTGAGCGGGGATGAGCCGGTCGAGCTGGGAGAAGTCGAGTACGGTCTCGAGTGCTCCCCGCGTGAGCGGGGATGAGCCTTCCCATCGTGAGAACAGCACCAAACATGACTAGTGCTCCCCGCGTGAGCGGGGATGAGCNNNNNNNNN # Questionable array : NO Score: 5.62 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-14.00,-14.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [35.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,5.24 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 6 49195-48983 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV817226.1 Corynebacterium sp. HMSC077D10 Scaffold418, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 49194 29 96.6 32 N............................ CACGGGCGGCACGGGCTCCCCCGCGCGGATCG 49133 29 100.0 32 ............................. TAATCCCCAACAGTTGCGTAATTACGGCAATG 49072 29 100.0 32 ............................. ATCGTGTGAGCTAGCAGGCTCACCTTGGGTTC 49011 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 99.2 32 GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Left flank : CACGCACGGTGCTCCCCGCGTGAGCGGGGATGAGCCCAGAAGAGGAGGGGCTTTTCATGAGCCTGTCTAGTGCTCCCCGCGTGAGCGGGGATGAGCCGTCTGCGATGCCGGTTGAAACGTCTCCGAGTTCGTGCTCCCCGCGTGAGCGGGGATGAGCCCCGTGTTGCGTTGTATCGCGAATTCCTTACCAGGTGCTCCCCGCGTGAGCGGGGATGAGCCGTAATGACCCATCGAATCTCGAAGGGCTCGAAGGTGCTCCCCGCGTGAGCGGGGATGAGCCCCGCTCCGGTGTGGCCCTCGACCTGCGCCCCACGTGCTCCCCGCGTGAGCGGGGATGAGCCGGAGCTTGTCTTCGGGAACTTCCTTGATGTGGGGTGCTCCCCGCGTGAGCGGGGATGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : ATCGGTGCTCGATCAGGCCCGCGACATGCACGGTGCTCCCCGCGTGAGCGGGGATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTCCCCGCGTGAGCGGGGATGAGCCGAAGCTGCTTCGCGAGAACACCGCAGACTGGGGGTGCTCCCCGCGTGAGCGGGGATGAGCCGAAAGCCGCCGACGCCGCGAACTCATTAGCGAAGTGCTCCCCGCGTGAGCGGGGATGAGCCGATGCGCTGCCACGTCACGTCGTTGATGTAGAAGTGCTCCCCGCGTGAGCGGGGATGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTCCCCGCGTGAGCGGGGATGAGCCTCTCAG # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.90,-10.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [30.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 7 49931-49292 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV817226.1 Corynebacterium sp. HMSC077D10 Scaffold418, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 49930 29 96.6 32 N............................ ATGCGCCAAGTGCGGCAAAACCCAACTACGAA 49869 29 100.0 32 ............................. CGTGTTGCGTTGTATCGCGAATTCCTTACCAG 49808 29 96.6 32 ............................G TCTGCTTTAGTGGCGAGTTCTACCGGGTTAAG 49747 29 100.0 32 ............................. TCATGGTGGGGTGCGCATACCTATCACGCACG 49686 29 100.0 32 ............................. AGAAGAGGAGGGGCTTTTCATGAGCCTGTCTA 49625 29 96.6 32 ............................G TCTGCGATGCCGGTTGAAACGTCTCCGAGTTC 49564 29 100.0 32 ............................. CGTGTTGCGTTGTATCGCGAATTCCTTACCAG 49503 29 96.6 32 ............................G TAATGACCCATCGAATCTCGAAGGGCTCGAAG 49442 29 100.0 32 ............................. CGCTCCGGTGTGGCCCTCGACCTGCGCCCCAC 49381 29 96.6 32 ............................G GAGCTTGTCTTCGGGAACTTCCTTGATGTGGG 49320 29 93.1 0 ...........................NN | ========== ====== ====== ====== ============================= ================================ ================== 11 29 97.8 32 GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Left flank : TGCACGTGCTCCCCGCGTGAGCGGGGATGAGCCGACGCACTCCACTACCTAGACGAAATCAGTAAGGTGCTCCCCGCGTGAGCGGGGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTCCCCGCGTGAGCGGGGATGAGCCCTTATAAGACACCGCGTGAGCTTGCGCAAATTGGTGCTCCCCGCGTGAGCGGGGATGAGCCGGAGGAACCTATGACCACCATCTTCGGCGTTGAGTGCTCCCCGCGTGAGCGGGGATGAGCCTGAGGGAGGTGGTTATGGCTCTCATCGTTGTGAGTGCTCCCCGCGTGAGCGGGGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTCCCCGCGTGAGCGGGGATGAGCCCCACGGGCGGCACGGGCTCCCCCGCGCGGATCGGTGCTCCCCGCGTGAGCGGGGATGAGCCCTAATCCCCAACAGTTGCGTAATTACGGCAATGGTGCTCCCCGCGTGAGCGGGGATGAGCCCATCGTGTGAGCTAGCAGGCTCACCTTGGGTTCGTGCTCCCCGCGTGAGCGGGGATGAGCCCATCGGTGCTCGATCAGGCCCGCGACATGCACGGTGCTCCCCGCGTGAGCGGGGATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTCCCCGCGTGAGCGGGGATGAGCCGAAGCTG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 8 50239-50088 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV817226.1 Corynebacterium sp. HMSC077D10 Scaffold418, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 50238 29 96.6 32 ............................C TTATAAGACACCGCGTGAGCTTGCGCAAATTG 50177 29 96.6 32 ............................G GAGGAACCTATGACCACCATCTTCGGCGTTGA 50116 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 97.7 32 GTGCTCCCCGCGTGAGCGGGGATGAGCCT # Left flank : TGGACTCAGTGCTCCCCGCGTGAGCGGGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTCCCCGCGTGAGCGGGGATGAGCCGCGGGAAATCCAGCAAGCCGTGCATCTGCTCGCGTGCTCCCCGCGTGAGCGGGGATGAGCCCGAGCGCTATGGTCGTCTCTCCCTCCCACGTGAGTGCTCCCCGCGTGAGCGGGGATGAGCCGGGAAAAAGATTATCAACACAAAAGGTATGCACGTGCTCCCCGCGTGAGCGGGGATGAGCCGACGCACTCCACTACCTAGACGAAATCAGTAAGGTGCTCCCCGCGTGAGCGGGGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : GAGGGAGGTGGTTATGGCTCTCATCGTTGTGAGTGCTCCCCGCGTGAGCGGGGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTCCCCGCGTGAGCGGGGATGAGCCCATGCGCCAAGTGCGGCAAAACCCAACTACGAAGTGCTCCCCGCGTGAGCGGGGATGAGCCCCGTGTTGCGTTGTATCGCGAATTCCTTACCAGGTGCTCCCCGCGTGAGCGGGGATGAGCCGTCTGCTTTAGTGGCGAGTTCTACCGGGTTAAGGTGCTCCCCGCGTGAGCGGGGATGAGCCCTCATGGTGGGGTGCGCATACCTATCACGCACGGTGCTCCCCGCGTGAGCGGGGATGAGCCCAGAAGAGGAGGGGCTTTTCATGAGCCTGTCTAGTGCTCCCCGCGTGAGCGGGGATGAGCCGTCTGCGATG # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGAGCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-14.00,-14.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [38.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 9 50914-50336 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV817226.1 Corynebacterium sp. HMSC077D10 Scaffold418, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================================================================= ================== 50913 29 93.1 32 NN........................... TGCGGGGCGAACGACGAGGTTGCATGCTATCG 50852 29 100.0 32 ............................. GGAACCAGAACCGGAATAGTCCGGCACGAGCA 50791 29 100.0 32 ............................. TGCCGTTAATATTTGCGATCCATGTGGACTCA 50730 29 75.9 93 ......................NNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 50608 29 96.6 32 ............................G CGGGAAATCCAGCAAGCCGTGCATCTGCTCGC 50547 29 100.0 32 ............................. GAGCGCTATGGTCGTCTCTCCCTCCCACGTGA 50486 29 96.6 32 ............................G GGAAAAAGATTATCAACACAAAAGGTATGCAC 50425 29 96.6 32 ............................G ACGCACTCCACTACCTAGACGAAATCAGTAAG 50364 29 89.7 0 ..........................NNN | ========== ====== ====== ====== ============================= ============================================================================================= ================== 9 29 94.3 40 GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTCCCCGCGTGAGCGGGGATGAGCCGATTCTGGTCGTCGTTGACAACGCCGAAATTGCGTGCTCCCCGCGTGAGCGGGGATGAGCCCGGAACCAGAACCGGAATAGTCCGGCACGAGCAGTGCTCCCCGCGTGAGCGGGGATGAGCCCACGATGCAAGCTAATCTCCCCACCAACTACGCGTGCTCCCCGCGTGAGCGGGGATGAGCCCGCCGCCGCGACCTCGAGGATGACATCGAGCAAGTGCTCCCCGCGTGAGCGGGGATGAGCCCCCCCAGCAATTCCGAGATTCAGTCCTGGTGGTCGTGCTCCCCGCGTGAGCGGGGATGAGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTCCCCGCGTGAGCGGGGATGAGCCCTTATAAGACACCGCGTGAGCTTGCGCAAATTGGTGCTCCCCGCGTGAGCGGGGATGAGCCGGAGGAACCTATGACCACCATCTTCGGCGTTGAGTGCTCCCCGCGTGAGCGGGGATGAGCCTGAGGGAGGTGGTTATGGCTCTCATCGTTGTGAGTGCTCCCCGCGTGAGCGGGGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTCCCCGCGTGAGCGGGGATGAGCCCATGCGCCAAGTGCGGCAAAACCCAACTACGAAGTGCTCCCCGCGTGAGCGGGGATGAGCCCCGTGT # Questionable array : NO Score: 5.33 # Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:-0.63, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 10 51285-51011 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV817226.1 Corynebacterium sp. HMSC077D10 Scaffold418, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 51284 29 100.0 32 ............................. GGAACCAGAACCGGAATAGTCCGGCACGAGCA 51223 29 100.0 32 ............................. ACGATGCAAGCTAATCTCCCCACCAACTACGC 51162 29 100.0 32 ............................. GCCGCCGCGACCTCGAGGATGACATCGAGCAA 51101 29 100.0 33 ............................. CCCCAGCAATTCCGAGATTCAGTCCTGGTGGTC 51039 29 96.6 0 ............................N | ========== ====== ====== ====== ============================= ================================= ================== 5 29 99.3 32 GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Left flank : ACGGGCGGTGCTCCCCGCGTGAGCGGGGATGAGCCTCCCGGTCGGTCACACAGGGTGTCAACGTCGTGGTGCTCCCCGCGTGAGCGGGGATGAGCCCAGGCGGCGAAGCCTACATCCCAATGGCCCCGTGTGCTCCCCGCGTGAGCGGGGATGAGCCCGGTCGCACCTCGCCGGTGCCCGGCTCTTCTGGGTGCTCCCCGCGTGAGCGGGGATGAGCCGTCGGCACCGGGGATCGCTCCATACGCATCCGCGTGCTCCCCGCGTGAGCGGGGATGAGCCCGCTTTGGAAGCTATTACGACGGTGCCGGATAAGTGCTCCCCGCGTGAGCGGGGATGAGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTCCCCGCGTGAGCGGGGATGAGCCGATTCTGGTCGTCGTTGACAACGCCGAAATTGC # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCCCCGCGTGAGCGGGGATGAGCCCTGCGGGGCGAACGACGAGGTTGCATGCTATCGGTGCTCCCCGCGTGAGCGGGGATGAGCCCGGAACCAGAACCGGAATAGTCCGGCACGAGCAGTGCTCCCCGCGTGAGCGGGGATGAGCCCTGCCGTTAATATTTGCGATCCATGTGGACTCAGTGCTCCCCGCGTGAGCGGGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTCCCCGCGTGAGCGGGGATGAGCCGCGGGAAATCCAGCAAGCCGTGCATCTGCTCGCGTGCTCCCCGCGTGAGCGGGGATGAGCCCGAGCGCTA # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 11 51839-51444 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV817226.1 Corynebacterium sp. HMSC077D10 Scaffold418, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 51838 29 100.0 32 ............................. CGGTCGCCTAGCCGCGACCATTCGCACGGGCG 51777 29 96.6 32 ............................T CCCGGTCGGTCACACAGGGTGTCAACGTCGTG 51716 29 100.0 32 ............................. AGGCGGCGAAGCCTACATCCCAATGGCCCCGT 51655 29 100.0 32 ............................. GGTCGCACCTCGCCGGTGCCCGGCTCTTCTGG 51594 29 96.6 32 ............................G TCGGCACCGGGGATCGCTCCATACGCATCCGC 51533 29 100.0 32 ............................. GCTTTGGAAGCTATTACGACGGTGCCGGATAA 51472 29 96.6 0 ............................N | ========== ====== ====== ====== ============================= ================================ ================== 7 29 98.5 32 GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Left flank : GATGCTGACCTCTTCTTATGGAGCGAGCTCGAAACAGTTGCAGCAGGAGTGAATTGGGATTCGAAAGAGGCTAGCTGGGCATGATGGTATTGGTCATTACCGCCTGTCCTGCTGGCTTGCGCGGCGACTTAACGAAATGGGTTATGGAAATTTCCCCTGGAGTTTTTGTTGGTCAGCCAACGGCGAGAATTCGTGATATCTTATGGGATCGCACTGTTGAATTGTGTAAAGACGGTCGAGCTTTGCTTGTTTATTCGACGGACAGTGAACAGGGAATGGAGTTTAAAACTCATCGGCATGATTGGGTGCCGACAGATTTTGATGGCTTGTCTTTGATGATTCGTCCTGCGTCCGCGGGAAAACGAGATCGCTTTGGAAACGGTAGACGTAGTGAGTGGGCTAAAGCTCGTTTTAAGAAGCAACGCCGCTGAGGTGGAAGCTTCTCGACGGAGTTGGATCTAGAATAGGCCGTGCACTGCTGTTGTTGCTGGTTGCGAAGA # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTCCCCGCGTGAGCGGGGATGAGCCGATTCTGGTCGTCGTTGACAACGCCGAAATTGCGTGCTCCCCGCGTGAGCGGGGATGAGCCCGGAACCAGAACCGGAATAGTCCGGCACGAGCAGTGCTCCCCGCGTGAGCGGGGATGAGCCCACGATGCAAGCTAATCTCCCCACCAACTACGCGTGCTCCCCGCGTGAGCGGGGATGAGCCCGCCGCCGCGACCTCGAGGATGACATCGAGCAAGTGCTCCCCGCGTGAGCGGGGATGAGCCCCCCCAGCAATTCCGAGATTCAGTCCTGGTGGTCGTGCTCCCCGCGTGAGCGGGGATGAGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //