Array 1 58491-57382 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKVT01000018.1 Acinetobacter ursingii strain TUM15491 sequence018, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 58490 28 100.0 32 ............................ CAGCACTGAAATTATTTTTCATGATGTACTGT 58430 28 100.0 32 ............................ AACTGCACCCGCCTGCTCTGGCGTAACAGTAT 58370 28 100.0 32 ............................ GTCCAGTTGAACAATCGGATATCTGACATAAT 58310 28 100.0 32 ............................ CTTAAATATTTGATCTATTTAAATATTTTTGA 58250 28 100.0 32 ............................ CAACAGCAGCTGTCAACCTTGCTTGGGATCGT 58190 28 100.0 32 ............................ GTTCGTAAAAACAAACTGGTCAAGTACATTGA 58130 28 100.0 33 ............................ AGTGCAATTTACATTGGTGTTTTCAAATTTGGT 58069 28 96.4 32 ....T....................... ATGATAAGCAATCAAGTCACGATCATTGGGTT 58009 28 96.4 32 ....T....................... GATCAAACAGGGCATGAAACGTCCGGTCATGG 57949 28 100.0 32 ............................ GAAAGCTTGAGTGAATGCAAGAAGCGAAAGGT 57889 28 100.0 32 ............................ TAATAAACCATTTGAAAACAGTGATATACAAA 57829 28 96.4 32 .T.......................... TGGTGAAACCAACATGTTATTTTTTGATTTTT 57769 28 96.4 32 ..........A................. AGTCCATGACATCTCGGCTTTAATTTAAGCCA 57709 28 92.9 32 .........TA................. TGTTGATAAGCCTTAGCCTTCGCTTCTTGATA 57649 28 92.9 32 .T........A................. TTTACTCATACGAATACGTTGAAAAAGGCGGT 57589 28 96.4 32 ....................C....... AACATGCGGAAAGTTTAAACATCCGCCTCCAC 57529 28 96.4 32 ..........A................. AATCAACACAGATAATTTGCTTTTGCTCAACT 57469 28 96.4 32 ....T....................... ATGTAACACCATCAAAACTAGCAACAATACCC 57409 28 78.6 0 .T..............G..A....TTT. | ========== ====== ====== ====== ============================ ================================= ================== 19 28 96.8 32 GCTTCCTATCGCATAGATAGTTTAGAAA # Left flank : CTTAAAAATTCAGCTTTTTCACTGGGTAATAGTTTTGCATCCAAAATCTCTGCATCTGCCGCCCACTCTAACGAAAGTGTTTGTAACACCAGTGCTGAACTTTCTGCGAAATAGTCTTCGGTTCCCTGACCTAAATGAGCATCATATTGACGTAGTGCAGTCACACCGAAACGAATGAAATCACGAATCGTTGTTAGGTTTTCTGCTGCTTCCTGTAATTGTTCAGGGTGAATAGTCGGTTGCTCCACTCAGGGGTCTCCAAAAGATGATGATGCAAAACGGCTTATGATACCTTGTTTTGTCTTGCTTTTTAATGCCTAAAGCGAGTGGATTCAATTTTAAATCAAGTTGACTTATTGCTCTTTTTAAATCAATATTTTTCTTACCCTTTAATAATATAATAAAATCATAAGCTTATGATTTAACTTGTTTTTAAAGCATAATATTAAATTATTAAAATAACTTATTGTTATTAAATGATTTATTAATAAGAGTTTATA # Right flank : TTTTCGAGACTCCAAACATTTTGTTTTTAATTGCTGCATCGCTAAAGGATCCATCGGTGCAGTCATCATGGCCCGATAAGCCAAACATTCCTGCGTTTCTTCTGTTGCTTGAGATTTGGCATTCAAGCTATGGCATCCCATCAGTCCCAAAGAGAAAATACATCCTAGAATAAATTTGATGAACATTGGATTTTCTATAATTTAATATTTGCTGATATCAACTCCAATTTTAAAACGCAAAACAGAAAATAGAAACCATTGAATAGACTTGTTTCATAAGTCCCTTTCATTTCTGCCTATGCGAGAGAAATAAAGAGGGTTTAAACAATGATGAAAGACGTCATAGTGTATAGATCTTTTAAAATTTGCTTATTTTCATAAAATCTTCTACCAATATATAAGCATTTTAAAAAGATGAGCTTAATAAAATGACAAATCCAGATATTCAAAGTGTAGAACTCACAAAAGCCTATCGTTTACTTAATCATGGCCCAACTGTA # Questionable array : NO Score: 5.85 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.75, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCCTATCGCATAGATAGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: R [matched GCTTCCTATCGCATAGATAGTTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.70,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-91.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 36844-51105 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKVT01000009.1 Acinetobacter ursingii strain TUM15491 sequence009, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 36844 28 100.0 32 ............................ TTTTGACCAAAAAATAAATCTGCAAATAAGTC 36904 28 100.0 32 ............................ ACCACAAGCCCTTTGCTTCAATAGCTTAGGGC 36964 28 100.0 32 ............................ TTAGCTGCTCAAAAAGCACTTGAAGAACGTTC 37024 28 100.0 32 ............................ ATTTCTTAAAGTCCAAAAATAATAGCCTAAGC 37084 28 100.0 32 ............................ TGAAAATGAAAAGGGCGAATTAGATTGGCTAC 37144 28 100.0 32 ............................ ACGAGACTTTTTAACAAGTGCCATAACTGCTA 37204 28 100.0 32 ............................ TGAAAATGCCCAGGGCGAATTAGATTGGCTAC 37264 28 100.0 32 ............................ AAAACTTCCAGCTTTAAAATTTGCCCGTACCT 37324 28 100.0 32 ............................ GAGTGCATCGACAGCTTGATAAGCATCTTTAA 37384 28 100.0 32 ............................ TAACCCTGATCTTTAATGAGATCAGGGTTTTT 37444 28 100.0 32 ............................ TCACCTCAAACCTTGAATCAATTGCTTTTTGC 37504 28 100.0 32 ............................ AAAGCGAAACTTGAGAGCGTTTCTCGTTCCTA 37564 28 100.0 32 ............................ GTGGTGCTGTATCTGGTGCGGTTAAAGCTTAT 37624 28 100.0 32 ............................ GTTGATGACATTGGTCGCTACATATTGAGTAA 37684 28 100.0 32 ............................ TAGCAAAGCTGAGAAGCTGGGTGTGAAAAACC 37744 28 100.0 32 ............................ AATGTAAATGCACAGCCATCTTCCTTAAATAC 37804 28 100.0 32 ............................ ATGAATTTAACAGATGCCTTGTACAAGGTCAA 37864 28 100.0 32 ............................ ACCAACAAGCCTGCTTCACGTGCACTACCCTT 37924 28 100.0 32 ............................ TGATCCTGATGTGTACCAAATACCTAGCACAC 37984 28 100.0 32 ............................ TGAATTTTCCCACGATTCACCACTGTTTTAAG 38044 28 100.0 32 ............................ AGATCAACTTTTTCACGATTATTTTTTGCTAT 38104 28 100.0 32 ............................ AAGAGGTAATTGCTTGGGCGCAACAAGATTTT 38164 28 100.0 32 ............................ AGTGTCGGATCGCGTGCCAATCTTTCGAATTA 38224 28 100.0 32 ............................ GCGTACCACTGTGAGCGATGCGGGCGTTAAGT 38284 28 100.0 32 ............................ GCTAGAAACACGTGCCAACTTTTCAGACTTGC 38344 28 100.0 32 ............................ AAACTTGTCGCTGAAAAATGCGAGAATTGAAG 38404 28 100.0 32 ............................ AATTGAAAGACTTGCCATGCACGTTCATCAAG 38464 28 100.0 32 ............................ GAGTGGTTACGGCCTATTTAGTAATGCCTTAG 38524 28 100.0 32 ............................ TAACTGAGCTTAATAATCCATTTGAAGTAAAT 38584 28 100.0 32 ............................ TGCCGAACAACCTGTCCGAACTCGAAATGGTT 38644 28 100.0 32 ............................ TGCTTCGCCAATGTAGATATAGCCTGCATCTA 38704 28 100.0 32 ............................ TCAGCTTTCTGTTTTTCTTCAAGCTCTAACTT 38764 28 100.0 32 ............................ ATAAGATAAAAGACAATATCGAAGCTTCTACG 38824 28 100.0 32 ............................ AACCTAAAACAAAATCATCATTAGTCATATTA 38884 28 100.0 32 ............................ TTGAATTTTTTCTTATTATTTAATTGTTTATA 38944 28 100.0 32 ............................ ATTCATTAAAATGCTCTAAAACATTAAATCCG 39004 28 100.0 32 ............................ ATATGAGAAAAGATATAGAAGATAAGAGAAAC 39064 28 100.0 32 ............................ ACTTGGTGGTTCACGTCCAAAGCGTGTTAGAA 39124 28 100.0 32 ............................ CCTAAGGCATTAGCTAATTCAAGAATAGATCC 39184 28 100.0 32 ............................ TGAGGTTTTTTCTTCACCGCAATCTAAATTAC 39244 28 100.0 32 ............................ TATTGAACAAATTCGATGCGTTCCCCTTTCGG 39304 28 100.0 32 ............................ AATGTATTAGATTGATCTAAGTAACCTTTGGG 39364 28 100.0 32 ............................ AAACTGTCGGATCTACCAAAATGTAATCTCCT 39424 28 100.0 32 ............................ AAACTGTCATCTATTGCCCATGCAAATACCGT 39484 28 100.0 32 ............................ CAACGCGATGCGATGTTAAAGCATATGTTAGA 39544 28 100.0 32 ............................ ATCCTGTCGAATGGGCACGTTTTCTTGAGTAC 39604 28 100.0 32 ............................ CGCCGCTAGATCACGAATTTGGTATTCTCTGG 39664 28 100.0 32 ............................ TTTGATTCGAGCAAACCATCGCAATTCGCCTG 39724 28 100.0 33 ............................ AACGGTGCAGCATTTTGGAAAGATGAAACAGAT 39785 28 100.0 32 ............................ GCCATTTGCTCAAACATGGCAACGGCTTCAGC 39845 28 100.0 32 ............................ TTGCAAGCATTGCCTGAACCATTGAGGTCTCA 39905 28 100.0 32 ............................ ATTGGGAGTTACACGATTAAAAGGCTTATCAA 39965 28 100.0 33 ............................ TGATATAGACCAAATACATTTTGATTTTGGAAT 40026 28 100.0 32 ............................ GCCTACAGGTTGTCCTACTGGTTATGTTTCTG 40086 28 100.0 32 ............................ TTTATGCAGCGTTTTGTTGCCCAAACACACTG 40146 28 100.0 32 ............................ GAAGGAAAATTAATACAATCTGGAAAATTTAA 40206 28 100.0 32 ............................ AATAAAAGCTGCTGGATTTTCACTTGTAATGA 40266 28 100.0 32 ............................ TTCAACAATAGGTTTCATGGGTGTATATGGCT 40326 28 100.0 32 ............................ ATGGCGATGAAAGTTTTTTTCGATTCTAGCTA 40386 28 100.0 32 ............................ TTTGCAAAGTAATTGAACGGACGATCACCGTC 40446 28 100.0 32 ............................ ACAACTTCAAAGAAGTCAAATTTCTGGAGCTA 40506 28 100.0 32 ............................ CTTTGAAATTAAACTGGATCTCGTCAGCATTC 40566 28 100.0 32 ............................ AACTGAGCGACTGGAAGCTTTTTCGATACATC 40626 28 100.0 32 ............................ TACTGCCCTGTTATATCCACGGTTTGCACTAG 40686 28 100.0 32 ............................ GATTGCGCCTTGTTCCATTTCTTGTTCAGAAA 40746 28 100.0 32 ............................ GTCAAATGAAAATGCGCCTGAGCCTGAAAAAG 40806 28 100.0 32 ............................ AGTAATAGCAAATATGCTTGAATTAAGATCGA 40866 28 100.0 32 ............................ TTATCAAAACTTCAGTTGCAGCAACGATTGGC 40926 28 100.0 32 ............................ AGCGTGGAATTGGTGGGGTTAAATTGGCGTTA 40986 28 100.0 32 ............................ AAACGAAAGATTTAATAAAAATAGCGCTTATT 41046 28 100.0 32 ............................ GTCCGAGTGACGAATCATTTTGTGCAGCGCAT 41106 28 100.0 32 ............................ AGTGGGTCATTAATTGTCCGTACTGGAGAACT 41166 28 100.0 33 ............................ TGTTGTAAGATATATAGCCATTTTAATTAACCT 41227 28 100.0 32 ............................ TTGTTGAAGATGGTGATAGACCATTTAACTAC 41287 28 100.0 32 ............................ GTAGGGACGCCATTTTCTCCAAAGCTCTGCGT 41347 28 100.0 32 ............................ ATGAAGTTTGATTCATAAGCTTGTCTAAAACC 41407 28 100.0 32 ............................ GAACATTTACATGATGTCCTAAAAAGACTCCC 41467 28 100.0 32 ............................ AGTGGGTCATTAATTGTCCGTACTGGAGAACT 41527 28 100.0 32 ............................ AGAAAATTTAGGCAATAAAAAACCCCGAACAA 41587 28 100.0 32 ............................ GCAAGCGATTACGCAGAGCAATATTATTCTCT 41647 28 100.0 32 ............................ ATAACCAGCCATCGTCTGTTCAATATCATCGA 41707 28 100.0 32 ............................ AGTACACTATTTGGCAAAGCTGCTGCCGAAGA 41767 28 100.0 32 ............................ TCCAACACTGCATCAGTATGTGCATCAGCAAC 41827 28 100.0 32 ............................ TAAATATGATGAAGATGCCAATACTTTGACTT 41887 28 100.0 32 ............................ AAAATCGCTTTGGACAAACTAATTATTATCAA 41947 28 100.0 32 ............................ GCAACTGGATATTTGTACGCGCGTTTCAACAT 42007 28 100.0 32 ............................ GACTTGCAGCATCGGGTCGCTATAGCCAACTT 42067 28 100.0 32 ............................ CCGTGCTTTAGGTAGACGCCTAGCAAGTCGCT 42127 28 100.0 32 ............................ TGTATATTCCGCAATTGCGTTGATCGTGTCAT 42187 28 100.0 32 ............................ TTGGCAAAAGACATACAGCTACACGTGACACT 42247 28 100.0 32 ............................ TCGTTGAGCGGAATTAATTCAAAATATTCTTT 42307 28 100.0 32 ............................ TTTCAGCCGTAGGTGCGGCGACAGTTCCTGCA 42367 28 100.0 32 ............................ GTTAATTAATAAGGCGATAGCGTTATGACTGA 42427 28 100.0 33 ............................ GTTAACTCTTTCTTAACGTTAAATACTGCTGCT 42488 28 100.0 32 ............................ ACCAGAAATGGAAGCTACGAATAAAAGTGCTG 42548 28 100.0 32 ............................ GTTTGATTGGCGAGATCTGCCGAATGGTTCTG 42608 28 100.0 33 ............................ GTTTAACGGTGCATTGCAATATATTTTATTAAT 42669 28 100.0 32 ............................ ATTTGTTGATTTAACTGCTGAACCATACTCAA 42729 28 100.0 32 ............................ TTATGGTTGGCAGCAAAAGAAATCAAACAGGC 42789 28 100.0 32 ............................ CTTGCAAGAATAGTCAAATATAAGCTGCCCCA 42849 28 100.0 32 ............................ TGTTCGATCAGCTTCTTTTTCCAGTGCTTCAA 42909 28 100.0 32 ............................ AATTAAAGGCGGGATTCGATGTTGGTATGTGG 42969 28 100.0 32 ............................ AGACTGGAGGCGTCACGGTCATTCTAATTTCT 43029 28 100.0 32 ............................ TGCTGCGGTGGTTCGATTCTTTTTCCCATCTG 43089 28 100.0 32 ............................ TTTAAAACCTAGCAGCTAACAATTAGTAACCC 43149 28 100.0 32 ............................ TCTTTCTCTGCTAAAAAAATAAGAGCTAGTTC 43209 28 100.0 32 ............................ CGCCTCGCTAGCTGCTGCGCCCGATGAAAACT 43269 28 100.0 33 ............................ TAAGCAGATTTTTGAGCCTGATTCGCTGATGAT 43330 28 100.0 32 ............................ AAAATGACACCAGATCAGTACGCTCGCTATTT 43390 28 100.0 32 ............................ GAATGAGGATCAGCCAGAAGTTGAAGAGGTTG 43450 28 100.0 32 ............................ TGACGACCAGCCTGTCATTTCAGCCATGATCA 43510 28 100.0 32 ............................ AAGCATTGAAATTAACAGCGGAACAATCACGC 43570 28 100.0 32 ............................ TGAACCGGTCAAGCTCAGTGAAAAAGAGGTGT 43630 28 100.0 32 ............................ TAATGCATCGCGCAACACACTTAACTGCGCTG 43690 28 100.0 32 ............................ ATATTGAGGATTGATTCATGAATGCAATTATT 43750 28 100.0 33 ............................ AAAGATTATTAATAAAGTCTATCTGGTGTTCGT 43811 28 100.0 32 ............................ CAACATCGTGTTTTAAATCATGGATATGAACG 43871 28 100.0 32 ............................ ATATGCATAAATGCATGCATGTTGATAATGGA 43931 28 100.0 32 ............................ TAATAGATCAAGACTATTATCGACTGGACAAT 43991 28 100.0 32 ............................ AGTAATTAACGCTGGGCTAGATAATGTTTCAC 44051 28 100.0 32 ............................ TAATAGATCAAGACTATTATCGACTGGACAAT 44111 28 100.0 32 ............................ TAATTATGCGATAACCAATATAAATAGAAATA 44171 28 100.0 32 ............................ TGTGGCTGAACGTGCAACACAAGCAGTTCAGC 44231 28 100.0 32 ............................ TGATCAAACTCTTGACCAGCCTCATGATTCTC 44291 28 100.0 32 ............................ TACAAAAATGACCAAACCATCCGCTTGCCTGC 44351 28 100.0 32 ............................ TTGCATTGCGGCAGTCATAAACAATGAATAGT 44411 28 100.0 32 ............................ AATCAAATTCCGAGTTAGTGATTGACTTATCC 44471 28 100.0 33 ............................ TACAAAAATGACCAAACCATCCGCTTGCCTGCT 44532 28 100.0 32 ............................ GCTTAGGGAAAGCTAATGGATCAGAACAAGTG 44592 28 100.0 32 ............................ AGTTTGTCATGCTGATCTTTCAACACGTAATT 44652 28 100.0 32 ............................ TACAACACCCGATACATCTACCGCAGCATTTG 44712 28 100.0 32 ............................ ATAAGGATCTTTATTATTGCATTGACCCTCTT 44772 28 100.0 32 ............................ ACAAATCAATACATTTATTCTTATGTTTCAGC 44832 28 100.0 32 ............................ GCTCGAAGCTGAAATTGAATTTGAGATGGTTA 44892 28 100.0 32 ............................ TTTTGAGCCAAATTTTAAGATCATGATGTACT 44952 28 100.0 32 ............................ ACATGGACTAAGAACAATGCACTCTTCATTAA 45012 28 100.0 32 ............................ ATTACTTAGACTCCTCAGCTTGGTTTTGCTTA 45072 28 100.0 32 ............................ AGACAAAAGCCATTGTTTAAGCAGTAGTCCGT 45132 28 100.0 32 ............................ TGTTAAAAACGGTGAGGATTCAATGTCTGTTT 45192 28 100.0 32 ............................ TTGCATTGCGGCAGTCATAAACAATGAATAGT 45252 28 100.0 32 ............................ ACGAACACAGGCAGGACAAGACTACATTCAAA 45312 28 100.0 32 ............................ ACTAAAAATAAGGTGCGCGTTGCTTATACTAA 45372 28 100.0 32 ............................ ATCAACCCAAACAACATCTTTTACTACACCTA 45432 28 100.0 32 ............................ TTATGCGCCAGAACTGACACAAGGGCAATTAA 45492 28 100.0 32 ............................ TCATTCCCAATAAATCAGGAAAATAAAATGAC 45552 28 100.0 32 ............................ AAAGAACCTCAAAGCATGATCCTGTTTTAGTG 45612 28 100.0 32 ............................ TCACATTTAGAAATATGAAACGGCAAATATTG 45672 28 100.0 33 ............................ ACCAAAACGAGTGCATGGAATTTCAAAATTAAT 45733 28 100.0 32 ............................ TTCACTTTGGACGGCGTAGGGGCTTCATATAA 45793 28 100.0 32 ............................ CGACCCATCCGAAGCCGAACAAACAGTGGGGC 45853 28 100.0 32 ............................ AGGATTATTTAGTACGAGCGCAAAAGAAAGGC 45913 28 100.0 32 ............................ TCGCAGTTCTGAGTGATGCACTGTGCTTCTCT 45973 28 100.0 32 ............................ TATGCGTCGGTCAAGTCTGAAATCGCAGGAAT 46033 28 100.0 32 ............................ ATTGTGAATATTGAGATGAAGTAGAGACTCAA 46093 28 100.0 32 ............................ TACTTTGTACGTTACACCATCCACATCAAGCT 46153 28 100.0 32 ............................ TCAATCTGAGGGCCTGCCCTTTAATTATCTTT 46213 28 100.0 32 ............................ ATAAGCATGTTCATGACATTTTGGAAGATGGG 46273 28 100.0 32 ............................ ATACTTCGACCATCACCACAAATAATGCCTGT 46333 28 100.0 32 ............................ AAGACGATTGGCATCCAAGAAACCAAGCTGAT 46393 28 100.0 32 ............................ CAATTCGTCTGGTGTAACAACCCCATCTTCCA 46453 28 100.0 32 ............................ ATTTGTCGAATGATGAGCTTACACAGCTTGCA 46513 28 100.0 32 ............................ CTAAAATGATGTATGCAGCAGCGAAATAAGCA 46573 28 100.0 32 ............................ GTCACGATCACCGCTTGAATAATTCAGGTTTA 46633 28 100.0 33 ............................ ACACCGCCATTTGATAAGCCCCTTGATTCTTAT 46694 28 100.0 32 ............................ TGATAATTTTATCAGGTTTTTTTATTATAAAA 46754 28 100.0 32 ............................ TCAGTAAAAGTTGATGCTGCGGTTGGTAATTT 46814 28 100.0 32 ............................ ATAAAGGAAATCAAATGAACATGTTGGCTAAA 46874 28 100.0 32 ............................ AATGGTATGAATTGATCCAATATCTGCTAAAT 46934 28 100.0 32 ............................ TTTTTCAACGTCATATACAAGTGGCGAAAAAG 46994 28 100.0 32 ............................ ATAGGAAAATGAATAAGATTTACCTAATAGAT 47054 28 100.0 32 ............................ TGAACCGCTACCAGAGCCGTCACCATCACCAT 47114 28 100.0 32 ............................ AACGCTTGACCCAACTGATCAAAGGCGAATTT 47174 28 100.0 32 ............................ TTACTGGAGAAACTTTCACACATTCAATGAAA 47234 28 100.0 32 ............................ GCTTAAATTGCTCCAAGGTCATAATGTTTATG 47294 28 100.0 32 ............................ AAGAACGTATCCAAAAAATATTTGAACAGAAT 47354 28 100.0 32 ............................ ATGCCCCAGTTGAAAGTTGCTTTAGCTTCCAA 47414 28 100.0 32 ............................ TGAATGTCCCGAGGTTGGTTATCCAATTAATG 47474 28 100.0 32 ............................ ATAAGAAGCAATAAGTTCCATTGCTTCGATAG 47534 28 100.0 32 ............................ CTAAAGGAATGCGATGATTGTCCACCTCCGTT 47594 28 100.0 32 ............................ AAGTTTCCGAAATCATGAAAAAAGGCGGTGTT 47654 28 100.0 32 ............................ TCTATTGAGTTCCTCAAATATTTTCTCTATTG 47714 28 100.0 32 ............................ ACTCAAGGAAGGTCAATGTAACAATAAAGACC 47774 28 100.0 33 ............................ GATTTTTCGGAATAAATTCCGATTATCAGGAAT 47835 28 100.0 32 ............................ ATAAGGATCCTTGTTATTACATTGCCCCTCAA 47895 28 100.0 32 ............................ AAACAGCGAAGCCTATTAATCCAAAGAGAATA 47955 28 100.0 32 ............................ TTTCGCAATCAAACGTGCATGGGGTCAAGTCT 48015 28 100.0 32 ............................ ACCCACAGTTGATAATTCAGCAACTTTATTAA 48075 28 100.0 32 ............................ GTTGCAAATGCATATGTTTTTCGACTAGACGC 48135 28 100.0 32 ............................ TGAGAGACATACGGCAAAATAGTACCCTGTTG 48195 28 100.0 32 ............................ TGCGTAGGAACATACGTTCCTGTACTCGGTAA 48255 28 100.0 33 ............................ ATGCAAATTTAACTTAGAGTTTGAGTTTGACTT 48316 28 100.0 32 ............................ GAAAATATGTTCTACCGTAGATTCGACCAAAA 48376 28 100.0 32 ............................ ATGTCATCATACTGCCGAAACTGCTGATGATA 48436 28 100.0 32 ............................ TAAAGCATCAGAGATTTGTTGCTTGAATCCAG 48496 28 100.0 32 ............................ TGTCGCTCCATCAGTATAAAGTAGCGCATTGA 48556 28 100.0 33 ............................ ATGACTTCATGGAAAGTTGCTGTTGTAACTTTT 48617 28 100.0 32 ............................ GCAGCCATTAATCCAGATATTCAAACTGTTGA 48677 28 100.0 32 ............................ TAACAAATTGAATCCTGACGTTTTGGCATCGG 48737 28 100.0 32 ............................ GCTACCTGAACCATTTCCGCTACCAGAACCGT 48797 28 100.0 32 ............................ GTTGCAAATGCTAAAAGTGTTGCACGGGCAGA 48857 28 100.0 32 ............................ ACTTGCTGGTGGAGCGCTCACGGGACTATTGA 48917 28 100.0 32 ............................ TTTAGCTAAACGGACTTCTGGATTGTTGGATT 48977 28 100.0 32 ............................ GGATGTAAAAAATAATTGCACTGGAACATATT 49037 28 100.0 32 ............................ TGCGCAAATCATGAAACGTAAATTCGATACCT 49097 28 100.0 32 ............................ GATCTGTGCTTTGACTTAAATCAAGATTACCC 49157 28 100.0 33 ............................ ACCAAGTTTATTGACCAACTCAAGCGAATTTAT 49218 28 100.0 32 ............................ AACTGTACTTAGGTATTCACGATACTCTTCTT 49278 28 100.0 32 ............................ GCAATAGGAATACCTTTGGAACGTGCATCGTG 49338 28 100.0 32 ............................ TGATGCCACAGCGAAAATACACACATTTGAAT 49398 28 100.0 32 ............................ TACCACAAATCTTCACTACATAGACCCATACG 49458 28 100.0 32 ............................ TAATTTATCACCCTTGCTCAAGACTGATTATG 49518 28 100.0 32 ............................ TTGTCCCTTTTTCTGAAAATCTAGATACTAGA 49578 28 100.0 32 ............................ GATGTTTATACATACACATATTCGGCGTTTAG 49638 28 100.0 32 ............................ TGAACACATGCTGTATTAGAGAAAGTCAGTTT 49698 28 100.0 32 ............................ TGAAAAACGTAATGCAGAACTCGCCCAGACAA 49758 28 100.0 32 ............................ ATGTATTGAATAACCTCAGCAGCAGTACCGCC 49818 28 100.0 32 ............................ AATCCCTTCAATGACTTTTGAGACAGGAAACC 49878 28 100.0 32 ............................ ACCAGTACCAGATGTACCTCCATTCGAACCTG 49938 28 100.0 32 ............................ TGTTCCAGTACCAGTTCCTGAACCATCGCCAC 49998 28 100.0 32 ............................ ACGACAATGCATTTTTCATTGTCGATCTGCCA 50058 28 96.4 32 ....................T....... GTGCGCTAACAAGTGTACAGATTTTAAAGATG 50118 28 100.0 32 ............................ ACATGCGAGCAAATCATCTCTACGCTTATAAA 50178 28 100.0 32 ............................ TGAGAAGATCAAACCAAAAATGATACCAACCC 50238 28 100.0 32 ............................ TATTTAGGTGCTGCATTCATCATTGCAGGTGT 50298 28 100.0 32 ............................ CATATTCGGCGTTTAGTCGAAAAACACATGCA 50358 28 100.0 32 ............................ ATTGCATTGAAAACATATTTTGTTGTCTTTTT 50418 28 100.0 32 ............................ AGTTCCAGAATTACTATTTCCGTTTTTAGCAA 50478 28 100.0 32 ............................ TTTGGCAATGTTAATAAAAGTATTTCATTTCA 50538 28 100.0 32 ............................ ATACAACAGTCCTAATCAACCCCAATATACGG 50598 28 100.0 32 ............................ TGAAGATAATGAAATTGACTGTAGTGATCTAA 50658 28 100.0 32 ............................ ATCCAAAGAAAAAGCGCCTGAGCCTGAAAAAG 50718 28 100.0 32 ............................ TGTCGGGGGACGTTCGCAATAAGTACCTGTAC 50778 28 100.0 32 ............................ ATATTGGTCAACTTTATAAGCTTTAACTTCGA 50838 28 100.0 32 ............................ TAAATTTGAATTCGAATTTATAAGATGGAGTT 50898 28 100.0 32 ............................ GCTAGCCGCATTGACACCAGCAACTGCTGAAA 50958 28 100.0 32 ............................ AGCAAGACCAAACACGCCGCCACGAATTAAAT 51018 28 100.0 32 ............................ TTTAACATAAACAGTTCGACCATCCCATTTCA 51078 28 96.4 0 ....................T....... | ========== ====== ====== ====== ============================ ================================= ================== 238 28 100.0 32 GTTCATGGCGACATACGCCACTTAGAAA # Left flank : TGGAGCAACTGAATCTAACTCATTGGTTAGCAAGGCTGCAAGATTATGTACATGTCTTATCTGCTCGTAAAGTTCCTGAGGATAAGATCAACGGCTATGCTACTTATTTTAAAGTTAATCCAAAATTGACGGTTGAGCAGCGTGTTGTTCATCAGGCAAAACGTCGTGGAATCTCAATTGAAGAAGCACAGGAACACTTTAAAGCATTGGATCTGACAGAGACTTTTGAACCTTATATTAATATGAAAAGTCAAACTAATGATATGAACTTCCGTTTGATTATTGGAAAAAGACGTGTTGATGAAGCAAATATTGGAAAATTTGGAAGCTATGGATTAAGTCGTACATCTACAGTACCCGAGTTTTAACCCAATATTTTTTAGACTCTTTAACAGCTTAATAAAATCAATAAGTTATAACTTTGCTTTAAAACTTTGGGTATTACATACTTTTTAGGGTTAAAGCACTGTTATAACTTTATTTTTTGCTTTATTCTTATT # Right flank : ATGCAAACGATGTGTAAGAGCTTAAGCTGATTGATTCACGAGAGTAGAATATGGAATCTAATCGCCCGTAAAAATGAGTTAAAAAGAAATAATATAAACAAAAACGAACTGCTTCTGGCGAAACAGTGCGTTAGGTTAATAAGATTATGCTGGTAAATCGAACCAGATCATTTCACTATCTTCAAGTGCATGAATCGTAGTTTTCTCATCAAACAATAAAGCATCACCTGCTTTAACAATTTGATTCTCAATCATAATTTGACCTTTAATCACATGCACATAATTGTGTTTTTGAGTTGCAGCAATCTCAAGTGTTTTACCAGATTCTAACACAGCCGCTTTCACTTCTGCATTTTGGCGAATATGCATAGCAGCATTATCATTTGGTCCTGCAATCAAGTGCCATTGATTTGGCTGTTCACTCGGATCAAGTTTGATTTGTTGATACGTTGGTTCAGCATCGCGTACATTTGGATGAATCCAGATTTGAAACAGATGCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGACATACGCCACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGACATACGCCACTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.70,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //