Array 1 3740176-3738498 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025050.1 Pseudomonas aeruginosa strain PB368 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 3740175 29 100.0 32 ............................. GGATTGCTTCGCCCATCTGCCGGGCCTTGCGA 3740114 29 100.0 32 ............................. ACCGGATGCAGTCTTAATCCCTTTTTGCGTCG 3740053 29 96.6 33 ............................A GTTATGCTGGTGCTGTCATAGATCATGTCGAAC 3739991 29 100.0 32 ............................. CTCTACGACGAGAAGTTTGGCCTGTCGCTACT 3739930 29 100.0 32 ............................. TCTATGGGAGGTGGGGAGTGAACGAGACCGTA 3739869 29 100.0 32 ............................. TTGAGGGCAAACGACGTTTTGCCCATCGAGGG 3739808 29 100.0 32 ............................. TAACGGCCCGCCCCTTCACGCGACCTCCCGCG 3739747 29 100.0 32 ............................. CCAAGAAAGAACGCCGAAAGGCCGTTAGGAAA 3739686 29 100.0 32 ............................. CGGGCCTTGGCAGCGAGCAGGGCCTTCATGCC 3739625 29 100.0 32 ............................. CGCACTGATGCCAGAGCCGGAGTCGCGACCGG 3739564 29 100.0 32 ............................. TCGGCCATCACTGGCAAGGTGCGCGAAGGCGT 3739503 29 100.0 32 ............................. GCGCTTCACGGAGACGGCCTGCTGTTCCCTGC 3739442 29 100.0 32 ............................. TTCAGCAGGGCGTCAGGGATGGCATCGTGTCC 3739381 29 100.0 32 ............................. GCTACTGTCGAAGCCGGCACCACTCTGGACGC 3739320 29 100.0 32 ............................. GCCGGATTCCGCTGCCGGGCTACATCATCCCG 3739259 29 100.0 33 ............................. CGGGGCATGACTTCAACCCACCCCCAGCCCTCC 3739197 29 100.0 32 ............................. TCGCACTTCCAGCCATGGCTGGACAAAGCGGC 3739136 29 100.0 32 ............................. GCAGTCAAGGCTGCCGGCGGCCAGTCCGCCCT 3739075 29 100.0 32 ............................. GCCAGCAGGGATGCCAGCACGCAGCCAGTCGC 3739014 29 100.0 32 ............................. CAGTGACGGCAGCAGACGCGGCGATGCTGGAT 3738953 29 100.0 32 ............................. TCGGTAGACGCACAGATGGTCGAGCAACTTCG 3738892 29 100.0 32 ............................. GCGCAGGGCAAAGCCAAGGTCACCGCCGGCAC 3738831 29 96.6 32 ...........A................. TTCGAGGTCAGCGGCTTCGGCCCCGGCGAGCA 3738770 29 96.6 32 ...........A................. CCGGGAATGAACGTTCCCATGTCGGCTACGCC 3738709 29 96.6 32 ...........A................. GTCGCCAGGCCCACGTCGGCGGATCACCAACA 3738648 29 96.6 32 ...........A................. ATGTAGCTGTTACGCGGTCCCGCGGTGCTGAG 3738587 29 96.6 32 ...........A................. GTGATGGAGCGGACCGCCCCGAGCACCGCAGA 3738526 29 93.1 0 ........T..A................. | ========== ====== ====== ====== ============================= ================================= ================== 28 29 99.0 32 GTGTTCCCCACGTGCGTGGGGATGAACCG # Left flank : TGACCCGCATCATTCCCACCATCGAAGAGGTACTGGCCGCCGGCGGCGTCGAACCTCCCAGCGCACCGCCCGAGTCGGTGCCGCCAGCCATTCCCAACCCGGAGGGAATCGGCGACCTCGGGCACAGGACGCAAGGGTGAGCTTCCTGGCCGTAGTGGTGGAAAACGTCCCGCCGCGCTTGCGCGGACGTCTGGCAATCTGGCTGCTGGAAGTCCGCGCGGGCGTCTATATCGGCGATGTATCGCGGCGTACCCGGGAAATGATCTGGCAGCAGCTGAGCGAGGGCTACGAGGAGGGCAACGTGGTAATGGCCTGGGCCGCCGCCAACGAATCCGGCTACGAGTTCCAGACCCTGGGCGTTAACCGTCGACATCCAGTGTTGTTCGACGGGCTGCAATTGGTGGCATTCCAGCCTCTGGATCGGACCACGGAATAGAGGATGAGGCGGTAGATTTTTCGAGGTGTTTTTTCTTCTTTAAAAACAATTCTGTACGGTAAGT # Right flank : TGGAAGTACGCTCGCGCAGCGAGGATGCGATATATGCACGGGGCGAGCCGTTCACTTGAAAAGCCGACATTCCTGGCTGTCCTGTATTTCCCCTTTGGCATGGATAGAGCAGCCCCATAGGGCGAACGACGCCACCGGCGTCATTCGCCATGGCCGGGTCAACCGGAACGTCGAGCGGCTACCAGGCGCTGCTGCAGGCGCGTCAGGAAGGCCACTTCGAAGGCGGTCTTCTGCATCGGTGTGGGCAGGCTGTCGCGGCCGAAGGCGAAGGCGGTCCAGAGCTGGCCTTCGATCTGGTCGGCAAGCCAGTTCTCGGCCTGGCGGACGCCCTTGTCGATGGCGGGCTGGGCGGGAACCGGCCAGAGCAGGGATAGACCGGGTTGCCGGTCGGCGGGGGGAATCTCGACCATCAGGTCCTTGTAGCGTTCGATGATTGCGTCGACGTGGGTCTTTTCCTTTTCATCCTTCGTCATGCTGGGTACTCCGTTTCTGAGAGTCAC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGTGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGTGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 3750475-3749348 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025050.1 Pseudomonas aeruginosa strain PB368 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3750474 29 96.6 32 ............................A GCAGGATTTGGAGTCGGAGCGTTTACCTACAT 3750413 29 100.0 32 ............................. GTGAACGATGCGAATCGGGCGGGGGTTTGGTC 3750352 29 100.0 32 ............................. GCTTGGTAGATGCCTGGAACAAGTCGGTCAGC 3750291 29 100.0 32 ............................. CGCGCTGTCCTCGGCCTGGACTGGACCATCGA 3750230 29 100.0 32 ............................. TGGGCGAACGACGGCAGCGTCACCCAGGCGCA 3750169 29 100.0 32 ............................. ACAGGGACGTTCTCCGCGAGCTGGCCATCGAC 3750108 29 100.0 32 ............................. GCAGAGCGGATTGCTGCCCGCTTTGTCGGCAC 3750047 29 100.0 32 ............................. GGGGTGGTAGCACCGGACTCGCGGATCTTGAA 3749986 29 100.0 32 ............................. GCGTACATGACTGAGGGAGAGTCCACGGACCT 3749925 29 100.0 32 ............................. TCATATAGCTTGTATTTTTCCTTGCTATGAGA 3749864 29 100.0 32 ............................. AAAAACGACGGCATTCACTACGCGCGCCAGGC 3749803 29 100.0 32 ............................. GCGTTCATTTCCCAGGACGTGGACCAGCTGCG 3749742 29 100.0 32 ............................. GCCCCAAAAAGCGTTGGCGTCATCGGCTGGCT 3749681 29 100.0 32 ............................. TTCATGAACGGCAGAACGTTGAGCGCCGATTT 3749620 29 100.0 32 ............................. GTTGTTCTAGAGTCCGTTCAGGAGATGCTTCT 3749559 29 100.0 32 ............................. AGGTATTCCTTGCCCTTGGCCAGGAGCACGCC 3749498 29 100.0 32 ............................. TCATCGATCGTGGCGGCTGCACTGGCTGCCTG 3749437 29 89.7 32 ..............C..........G.T. GTATCGACATCGATGGTGACCAGGCTGGTCCG 3749376 28 79.3 0 A..........A..C.....-..A....T | C [3749367] ========== ====== ====== ====== ============================= ================================ ================== 19 29 98.2 32 GTGTTCCCCACGGGTGTGGGGATGAACCG # Left flank : GGCATCGTTGTACAGGGCGACGAATTCCGCGCCCCAGAACAGCACGATCTGCGCCTTGGCCGGCAGCAGCGTGGCCATCGTCGTCTTCAGGCTCGCCGACCAGGCGTCCGGCGGGCCGAGGGGCGAACCGGCCGCGTCGAGGCTGAGCAACAGTTTCCCGACCGCTCCTCCGTTGGCCAGGAAGGCCGGTGGATGGTCGAGGGTGTTCGGGTCCGGTTCGATGGTGAAAGGCTGTGCCATGTCTGCGGAGTCTTGCTCGGTTCCGGTTGAGGTGGTGGGTTGCATGGAATATAGGAGGGCGGTGGGTGCGCTTGCGTTCAATCAGCTTGGGGGACCGCGGGATCCCGATGCGGGTAGGTTTCGAATGGTCCCGAGGGAGCTGCCGGATTAGGCTGTGGGATGAGTACGGCCCTCATTTCCAGGAGCGGCGCGAGGGCCGCTTGGCCCGGTGGAATTTTGCTGTTGTTTTTCTTTTTTTAAAACAATGGGATACGGTAAGG # Right flank : GTCTACGCTCCTGCGGTTCGCCCCACCGCGCGGTATTTCCCATGGTGGGGCGAACCGCGCGGCACTACGACCAGTGGCGTAATCACCAGTGTCAGCCGCCAGTTGCCGGAGACGCGGATCGCCCACCGTCCGGCAAGATCCTCTTTCAGGGCATGGAGTTTCCAACCAACCTGGTTCACGTCGCTGGGGATGCAGGCTTCGCTCAGCACGAATAACTGACGGCGCAGGCATTGGGCGGGGGCTGCCTGGATACCTTGCCCTTACCGGTCTCGAAGAAGGCTTCCAGCCCCCTGTGGCGGAAGGAAATAGATTGTGAACAGGCGGCAAGTGAAGGTTGTTAGTGAGTTAGCGGAATGTCCGACGTTCGCTGTTGCACCATGGAGTTCCTGCTAATTTGGACAGGGGTGGTCGGTCCGGTCCATATCCCTCCTGCGCTCCTTCGCTTGCTAAACGGGGGGAGCAGGCGCATCCCTCGCTGGCTGCTCCTTGACGAGCGTCAT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGGGTGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGGGTGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //