Array 1 4005-2916 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG695976.1 Paenibacillus sp. oral taxon 786 str. D14 supercont1.7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 4004 32 100.0 33 ................................ GCCGATTTTAGGACGTCCAGCATGTTTACGAGC 3939 32 100.0 33 ................................ TGCAGATACGGCATGATTAACTGCATATCATTT 3874 32 100.0 34 ................................ CCTCAATAATTAACTCTTTTACCGATGCATAAAA 3808 32 100.0 33 ................................ CCGACCGGATCATTTGAAACCACGCTGACCACG 3743 32 100.0 34 ................................ AGAAGAAAGCTCTATGAACGAGGGGGCGAGGTGG 3677 32 100.0 35 ................................ CACTCGTGCGGGAAGATCAACATTGACACAATAAA 3610 32 100.0 35 ................................ GGCGTGTTGTTTACGAATCCGGGCCCTAGCTCTTG 3543 32 100.0 34 ................................ GTCGTCGTCCTCTCGGCGTGACAGGATATCCGTC 3477 32 100.0 34 ................................ TGCCATAAGATCGGCTCTCTCGTCCCTCAATTCA 3411 32 100.0 34 ................................ CGATCGGCCCGCGTCGCCGCTCTGCGTAGCGACG 3345 32 100.0 35 ................................ TCTCGCGTGCTAGACGGCAACTACCCGGATACGTC 3278 32 100.0 33 ................................ CTCCTCGAAGGTATCGACGCAAATATCGAAAAG 3213 32 100.0 33 ................................ GATCCGACGGGCATTCATATCCTCAAGTTCAGA 3148 32 100.0 34 ................................ TGCGGGATGATGCAAACTTGACCATCCGCCAATT 3082 32 100.0 35 ................................ TATCGAGATACCCCTGACCGTCACGCGAGTAATGA 3015 32 100.0 36 ................................ AACAAGTCAACAAAGAGTACGGGATTCAGGACAACA 2947 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 17 32 100.0 34 GTCGCACCCTGTAAGGGTGCGTGGATTGAAAT # Left flank : TTCCTGACAATCCACGACGTGCGGGATGTGTTTGGGGAGGGATTTTTGGATATATCGAAGTGAGAGTGTTTGTTTGATTGGCTGATCTTTCTCCAATTACTTCAACACGATAAACCGCAGATTAACTGGCAGGGTTTCATGCTATAATGCACATATAAATAGGGGCTGCCCAAAAGTGATGTGAATCTACCTGTGGAAGCTGCTTTATGGGATGTCACAGAAGAGGGGGGGTTATATTTCTTTGGTTTCAGTTCGCAATATGCAGTTAAAATGAAATGAAACAGTAGGAGATTCATGGCGAACAATTTTTTAGGCATTTCGTCATGAATGTTATTAACTTGGTGCGAATATGAAGTGAACATGATTCTCCTAGGGGGTTCGCACCACAAATTTCTTTTATAACTGCCATTTCTACCAATATTAAACATTATATAGATTGAAATTAATCCAATATTTACACAATCTGTTGATAATTAGCTGAAAATATCTGTGAAATCGCA # Right flank : TCGTGCAAAGGAATTCTCTTTCACGTCCTCAAACGTCGCACCCTATATGGGAGCGGGAGGTTTCCGACAAGTAGACAGTAAGAAAAGAGGTATATTAAGCAAAATCGATTCCCGGTATCCACCGGAGAGCGGTCACCAAGCTTTCCCTAATCCCAGCTTGTCCTTCATGGAATACGAACATTCCTCCCCGAGACAAACAGCTTCTTTCTTATTCTCCACATTCTATCAATTCAACTTCTCCTTTATTTGTAATCATAGTACTTTTTGCCCGAATATTGGTGAAATATGACAATCAATGCGGTAAAATAGAACTAGATTGTATATGATCATGTGCGAGGAGATGTGCTTGTGTTTATTGCTCATGTACGAGAACGTGATAAAGAAATCCAACCGTTAAAAGCACACTTACTTGGAGTGCAACGACTGGCGGAACAATTCGGGGCAAAGTTGGGTCTGAAACATGTCGCAGGGTTAGCCGGTTTGCTTCACGATCTGGGGAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTGTAAGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTTGTACGGGTGCGTGGATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.10,-5.30] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [46.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 22123-22281 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG695987.1 Paenibacillus sp. oral taxon 786 str. D14 supercont1.18, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================== ================== 22123 28 100.0 38 ............................ GAGGCGTAGTTAGAAGATCCCCTTCGTCGATCTCCCCA 22189 28 96.4 37 ........................C... AAAGGCGCGGTGAGAAGATCCTCTCCTAGATTCCTCG 22254 28 96.4 0 ........G................... | ========== ====== ====== ====== ============================ ====================================== ================== 3 28 97.6 38 TTCTGAACCAAAGGGATAATCGTGTAAA # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCATTCGTATAAAAACCCATGCCCGATCCCTCCAATTTAAATCCCTCTAACTCAACGAATATGAACATATGTTCCCTTTGTTATCATTATACCAAACACCTGTTCGTAAATCAAGAAAAATATCCCAGATAAACCATCTTATCTTCGTAAAAACGGAACGATCAGCTCCACGGGCTATCTCATTTCTATCCCGCCTATGGAGTTCCCAG # Right flank : AAGGGCAAGCGGTTGTGAACATTGTTCGAAGACCTGTCACAATACTCCGGGAATTTCTGACAAACCTCCGGGTTTCTATCGACTCTTTTTTGGTAGTATGGTATTATGATAGTCTGATAACGTATTAGCGGACTAAAGCGAGGTTCTGAGCTAAGCTAATACTATTTGAGTTAATAGTTAAGCTAATAGTATTTGAGCTAATAGCATTACTCAGGGGGAGAGACAGATGAAAGCTAACAAAAAAATGATCATGATGAGCCTAGTGATGGCTCTGGTGTTAACGGTGCTGGCCGGCTGTTCGGGGTCGGGAGCGGGGAAAGAGGATAATAAGCTGGTGATCGGGATCGACGATAAATTCGCACCGATGGGCTTCCGCGATGAAAATAACGAGATTGTTGGCTTCGATATTGATTACGCCAAAGCGGCGGCGGAGAAAATGGGAATGGAAGCCACGTTCCAGCCGATCGACTGGTCGGCTAAGGAATCTGAGCTGAACAGCG # Questionable array : NO Score: 2.55 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCTGAACCAAAGGGATAATCGTGTAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 5677-9576 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG695972.1 Paenibacillus sp. oral taxon 786 str. D14 supercont1.3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================== ================== 5677 32 100.0 35 ................................ ATCGAGATAAACTCTAAGCATACCTGTCCAATAAT 5744 32 100.0 34 ................................ AGTTTGAGCCGCCCTATCTCCACGCTGATCTAAC 5810 32 100.0 35 ................................ TCAGACCCCCCCTGATATGATTTGCGAAAAAATCG 5877 32 100.0 33 ................................ CCGACCGGATCATTTGAAACCACGCTGACCACG 5942 32 100.0 33 ................................ ACTACGCACGTTATGAATGCTGATGTAGCTCTT 6007 32 100.0 36 ................................ CACCCAACATGTTTCCGCCTGCAGATGTGGAGCTGC 6075 32 100.0 34 ................................ GCCTGTAATGACATCAGTGTCTACGCCGCCAATC 6141 32 100.0 34 ................................ ATTGCCGCCCTCATCCTTACCCTCCCCTTTGATT 6207 32 100.0 35 ................................ GTCAAGGTAAACACGCAACATACCTGTCCAATAAT 6274 32 100.0 34 ................................ TGGCCGGTGTACATGTGAGCGATGTGCTCCTTGT 6340 32 100.0 37 ................................ TCGCTCACCGTTGCAGGGCAAGCTTTTACCGCCTTTC 6409 32 100.0 34 ................................ TATGTTAAAACGCTCTGCTTTGGTCTGTGCCATG 6475 32 100.0 34 ................................ ATTGACTGCTCATATCGCTTTTGATGCTTACCCC 6541 32 100.0 35 ................................ GCGTCAGGCCACCTGCTTTTATTGCTGTCAGTACC 6608 32 100.0 34 ................................ TCTTATTTGGCGATCTACCATTTTTATGAATTGA 6674 32 100.0 33 ................................ ACTACGCACGTTATGAATGCTGATGTAGCTCTT 6739 32 100.0 35 ................................ CACGTTGATCTAACTCTACGATCATCCACTTAGGC 6806 32 100.0 36 ................................ AGCGCTACTTTAAGCACCACGATAAAGACGACAAAC 6874 32 100.0 35 ................................ CCCTATGTCCTGGACTATGACAGGGAGATGCAAGA 6941 32 100.0 36 ................................ ATCGTGTCATAGGCACGAGCAGTAAAATAATTTAAA 7009 32 100.0 35 ................................ CAGAATTACGGCGCCGCCTGGCCGACCTTGATCGG 7076 32 100.0 33 ................................ GTGGAAAGAGCACCGAGCCGAACTGAAAGCAAA 7141 32 100.0 34 ................................ GTCACAGCATGAGCGACAGCACCGTTCGGCGGCG 7207 32 100.0 34 ................................ CGCTCGAACATTGGAACACGCGTACCGCGCACGC 7273 32 100.0 37 ................................ TTTGGAGATAAATATAAACTTTGCAAAGAATACCAAA 7342 32 100.0 34 ................................ ATGCGTCAGGACAAGACAGTAGTAGGATACTCGG 7408 32 100.0 36 ................................ CGTCAGGCCGGACGTACCGTAACGGCTCTCGCTCGC 7476 32 100.0 34 ................................ TCCTCAAAATCCCTCATCAACGAAACCATCTCTG 7542 32 100.0 35 ................................ CGTAGCTCCTAAAAGATAATCCAGAAAGGGACAAA 7609 32 100.0 35 ................................ AGCCGTGATCCCAGCGGTTAAACAGTGGATCGGGA 7676 32 100.0 34 ................................ GATTGCTTGTACATAATCTTTGCTCTTAAACATC 7742 32 100.0 40 ................................ GGCAGTTTGTTGGATGGAGATATAATCGTCGTCGGACCAG 7814 32 100.0 34 ................................ ATTGACGGTGTGCCCGTGAAACAATCCGAGTACC 7880 32 100.0 34 ................................ AGGACGAAACTGCTCGGCTCAAAGAATCCGCTCA 7946 32 100.0 33 ................................ TTGAGTATAACGAAGCTCCAGCACTAGTGTTTG 8011 32 100.0 34 ................................ TTGGCGACATACGCAGCGGCGATCTGGTCGAAGG 8077 32 100.0 35 ................................ ATCGACATCCACGTAATAAGCGCCATCTTACGGTG 8144 32 100.0 33 ................................ ATCTTTCAAAACCAAGCACAACGCGACGAATAC 8209 32 100.0 33 ................................ GTCTAAGTGGAGCGAGTGGAACCAACACAACAA 8274 32 100.0 36 ................................ TGACGGCTGGATGCTTAGCCACCGCCGCGCGTAATC 8342 32 100.0 36 ................................ CGCGATTATACGTCGGCGTTGCAACGTCAGGCCGGA 8410 32 100.0 34 ................................ TGAACCGAAACAACAAGGTGATCCCAGAAGAGGA 8476 32 100.0 34 ................................ ACCTCTTCCTCCTGGATTAGCCCCTGTGACGCTA 8542 32 100.0 34 ................................ TCCAGGCTCCGGCTTCCGGATAAACCCGTACCGT 8608 32 100.0 35 ................................ GGCTAAGGCCATCGCTTCGCTGGAGGATAACTGCC 8675 32 100.0 33 ................................ TCACGTTGTTCGTCCAAACGAGTGAAAAGAGTT 8740 32 100.0 35 ................................ ATTTGTACATCAACAGTCCTGGAGGGTCGGTATTC 8807 32 100.0 34 ................................ ATAATGCATTATCTCCTTTCGCACTGCCTCCCGT 8873 32 100.0 33 ................................ AGCGGTATTAAATACAGCACCACGCGGGAGGAC 8938 32 100.0 33 ................................ GCCATGATCCGCACACTAGATAAAGAAGATGAC 9003 32 100.0 38 ................................ TCAGAACCGCTAAAGAAGATGGGTTGCCGCAGGATTAC 9073 32 100.0 38 ................................ TGCATCCTTCGGCTGGTCGCAATATCGCTGGCAGCATG 9143 32 100.0 36 ................................ ATTTTCCCATTCGGCGATTCTGGAGATTTCTTCCGG 9211 32 100.0 36 ................................ CCAACAGCTAACGGACGTGATGCAGAAGGTATTTAC 9279 32 100.0 33 ................................ GATAAGGACGCGGTGATCATTAACCAAGGAGAT 9344 32 100.0 33 ................................ TCACCAAACTTGGTCCATACCAGTTCAGGAATC 9409 32 100.0 36 ................................ CAAGGGCGCTGGACCCGGCTCGGTACGGCGATCGGC 9477 32 100.0 36 ................................ TCCCAAGGGAGATGCCTATTGAAGCAACGCCTCAAA 9545 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ======================================== ================== 59 32 100.0 35 GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Left flank : ATGAGTATCCGCCATTTTTATGGAAGTAGGTGACTCGGGATGCTTGTACTCATTACTTATGATGTTCAAACCTCAGGCGTGGGAGGAGCTGCGAGGCTCCGTAGAGTGGCTAAGGCATGTCAGAACTACGGACAACGGGTACAGAATTCCGTGTTTGAATGTAACGTCGATGCATCCCAGTTCACCGCTCTGAAACTGGAGTTATCCCAACTCATTGATCATGAAAAAGACAGCCTGCGATTTTATCGGCTGGGTAATAACTACAAAACCAAAGTTGAACATATTGGCGCGAAACCGTCGATTGATTTAGAGGACCCGCTCATCTTCTAACGGTGCGAACCCCAAGCGCACATAAAATCCCTATGAGGTTCGCACCCCGCGCTATTACTGGGGTTGTTGAGTTTTTTGTTGGAATAAACAATAACATTTCGCACTCACAAAACAGGTTCGCACTTCTGGGCATGTGAGGCCTTGTGGCTCAAGGCTTCACAAGGCCCGCA # Right flank : TGCCACTTTCTCGCGGTCCTGATCCATCTGGAGATCGTCGCACTCCTTGTGAGTGCGTGTATTGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.50,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [41.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //