Array 1 269273-269089 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH636444.1 Zavarzinella formosa DSM 19928 Scaffold6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 269272 37 100.0 37 ..................................... CCGAATGGATCGAGACGCTTGAGAAGGGATTTCACGG 269198 37 100.0 36 ..................................... GACGATTGCGAAACGCTCGAATGCTCCGAATGCGTA 269125 37 56.8 0 TT.CCA..GCCTCGGAAG..T................ | ========== ====== ====== ====== ===================================== ===================================== ================== 3 37 85.6 37 CATTTCCACGGCTCCGCAGCCGTGGCCGAATTGAAGC # Left flank : TAAATTGCCGAGTATAATTAGTTTGACGCGACATACGACTGGGCTGTATGATCACACAAACGCCAGTCAGGCGCCACCACAACCACAGGAGAACCGTCATGTCAGCGAAAGCACCGAAGCAAGCCGCCGCGAATCCCGCCCGCATTGACCGGGCCTATTCCCCGGCCGCGCAACTCGTCGAGTCAATCAGGATGTTCCTGAATGAAGGCCTCAATGCCGCGAGCGGTGGCGATTACCGTTCGGCCGCCCGTGACATTGAAGCCGCCCTGCTCATCGTCCGGGGCCAGCACATGCTGGCCAATGCGGGCCGGGGATGAGTGTTCCGCGAGAAGCCGGGTCATGAACGAAACTCCGGAAAACGCTCGCAAGTCAGAATGCCAGAGACTACAACGACTTGAGAAACGGATATGTGATGGGCGAATGTTTTTGAGGCCCGAATACCCTGCCCTCTCGCAATTGTGATCTGAAGCGTCCATCGTGCCAGCCTTTGTGACAGTGAC # Right flank : AAGTTCATATCACCGTCGCCAGAATCTTGTCGAACTCTTCCTTATGGCCCCACACTTCGATCTGAGCTTGGAGCCGCCTCCAAGCCTCCACGTCTTCCCGGCCGATTTCCTCCCCCCATGCCAGACGGGCCGCAATCGTGACGCACATCATCACGCCGGCCGCGACATATTCGCTTTGCAGGGTCGTCATCGCCTCGCGGATCAGCTTGCCCGTTTCCATCTTCACACCCTTTATTGTCATCTGTACACACGTTACACATCGGGGTATTCGACTGACCGAAGCGTACATTTGAGATAATTGTTTTTTATTTCTGACTTGCTTTTCTGGCGAACAGGATGTACATTATCTTCACGGGGCAAACGTTCCGTCCGACCGGCAGGGCGCCGGGATCTTTGAAAAGAGGAACCACACATGATCGAAGTCACCATCCTTTTGCCCGCCGACGACAACGACGGGAAGCCCTTCACACCACACCACGACGACGAATACTTTCTCGTTC # Questionable array : NO Score: 4.64 # Score Detail : 1:0, 2:3, 3:0, 4:0.28, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CATTTCCACGGCTCCGCAGCCGTGGCCGAATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCATCCACGGCTTCCGAGCCGTGGCCCCATTGAAGC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 1830384-1814412 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH636439.1 Zavarzinella formosa DSM 19928 Scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 1830383 37 100.0 35 ..................................... TCAAGGATGACTTGCTGTTTCAAAAGCTTCTGGAA 1830311 37 100.0 36 ..................................... CTGAAGGCCGGGCCAGCAATTCATGCCCATGTCCTC 1830238 37 100.0 36 ..................................... CAGCTAAACGACCGGGAAAACAATCCGCTTTGGGCC 1830165 37 100.0 36 ..................................... CTTCGATGGGGCGGACACGGGTTCTTGAGGACTGTC 1830092 37 100.0 37 ..................................... GATCCGGGGGAAGTGCTTTACCTCGGATGCGAGGGGA 1830018 37 100.0 36 ..................................... CGTTGATGCCGACCGAATTGCGGATCTGGTCCTTGT 1829945 37 100.0 36 ..................................... ATCCTTGTCCGGCTCTTTGCCGGCGAGGAGTTTGGT 1829872 37 100.0 35 ..................................... GCTTTTGGAGCGATCTTTTTCGCCACCCATGCCCG 1829800 37 100.0 36 ..................................... GCGGGCTCTTGGGGCTTCGCTTCCGGGCTCGGGGTC 1829727 37 100.0 39 ..................................... GTCGCGTCGTCGTTCACCGTCAACGCCGGGTCGGCCGGA 1829651 37 100.0 36 ..................................... GTTGCTTGCGGCTCTCCTGAAACGCTTCGTAGTTGA 1829578 37 100.0 35 ..................................... ACTGACAAATCATCTGGCGGTCTCTGGCTCATTGC 1829506 37 100.0 35 ..................................... TTCACCACGGCGAGGTCGAGCTTCGCCTTTTTGTC 1829434 37 100.0 35 ..................................... AGGTCGTGAAGCCCCCGTCGTTCACGAAGGGCGAA 1829362 37 100.0 37 ..................................... TTAGGTACTAAATCTCTTTTTCAAACTCAACAACAGC 1829288 37 100.0 36 ..................................... CCCGGTCGTGCCGCAATGCGGTTAGCTCGGTCTGAT 1829215 37 100.0 36 ..................................... GAGTTGACCAGCAGGCGGGAGGCGTCCCGCAGCAGG 1829142 37 100.0 37 ..................................... TACCGGCAGACCGTGACAGAGTATCTTTCGGGGACTG 1829068 37 100.0 35 ..................................... TTGGCAAAAATTCTTGGCTTCATGGAATGTCGACC 1828996 37 100.0 37 ..................................... ACGCCATTGCCCCCGCTGTCCGATGCCGCTGGTTCGC 1828922 37 100.0 35 ..................................... CTCAAAGACGTGTTCGTCCCCGATTCGTTTGTCAG 1828850 37 100.0 34 ..................................... GTCGATGTGATGCAGTTAGGCAAGGCTAAGGGAA 1828779 37 100.0 37 ..................................... TCAAGATAGCAGCAACAACGCCCGGGCGTTGTTCAGA 1828705 37 100.0 36 ..................................... GATGATGTCCCTCGGCGTCAAACCGGGCCGCACAGA 1828632 37 100.0 37 ..................................... CCTTGTTCCACTCACCTGATGTGTTTTCCACGTCGAG 1828558 37 100.0 37 ..................................... GAGTCCCGTCGCAAGCCAAGTTTGACATTCGGTCAGC 1828484 37 100.0 36 ..................................... AAGCGCTTCTGCTTCGGTGCTGTAAGGGCCATTGCA 1828411 37 100.0 37 ..................................... CCGAATGCACGCGAAGTGCAAATGGGATGTCGAGCAA 1828337 37 100.0 36 ..................................... TCGACAAGTTTCTCGGCAATGATCTCCGGCCAGAAC 1828264 37 100.0 36 ..................................... CCGTTCAAACATTCTCGGGACCGCCCGTATCGCCCC 1828191 37 100.0 39 ..................................... GCATTCGTCCCGTGATCGTTCGCGGGACTGATCCCGATA 1828115 37 100.0 37 ..................................... CGACAGATGCCCACCCGTAGGGCATTCTGCTTGCGTT 1828041 37 100.0 38 ..................................... GAGTATGACGCCGGTTCTTTGTGTGTCAAAATATCTGC 1827966 37 100.0 36 ..................................... AAGCACTGTATGAACATCCCGAATTGCTGGGATGAA 1827893 37 100.0 36 ..................................... GCTTTGGCATTACAAACCCACAGAAGAACAGATCAA 1827820 37 100.0 36 ..................................... TTTCCGGTGTGCGGACACGTGGCCACACCATCTCGG 1827747 37 100.0 37 ..................................... GGGTCAACGCCCGACCTGGCTCTCTGCCAATGATTAC 1827673 37 100.0 38 ..................................... GCGGGGAATGTGCCAATCTTCCCGAGGCCAAACAACCC 1827598 37 100.0 36 ..................................... AGATTAAAACAATTGGGTTTGGGTAGAGAAGCGGCG 1827525 37 100.0 39 ..................................... CCAATTTCACTACGACAGGTGTAAAGAATTACCTTCCAG 1827449 37 100.0 37 ..................................... GCAGCCTTCTCCCACGCGGCGACCCTCGCGCGTGTGA 1827375 37 100.0 35 ..................................... TTCGTCCCCTATTCCACGCGACACATCCCGGCTTA 1827303 37 100.0 38 ..................................... CGCATGGCCGGGGGCGGCGCCCGTGGCCGCGCCGCCGG 1827228 37 100.0 39 ..................................... CTCCCCGGCGGGTGGTGGAAACGTGTCTGGTTTGGCAAT 1827152 37 100.0 40 ..................................... CTGAAAGCACTCATGCCGTTTTGCTGCCAAAGCGAATACA 1827075 37 100.0 35 ..................................... ACCGCCGCCGATGCCGATTTGTTGTCGGCCGCGAG 1827003 37 100.0 35 ..................................... TTCGGCAAGCCGATTTTGCAGTTGATCCCCGCCAG 1826931 37 100.0 36 ..................................... AAGTTCGTTCCTCCCCGGTTCGCCACCGAGGCCCGC 1826858 37 100.0 36 ..................................... CGTTGTGCCATTGGATTCCGTTTCTTGGAGGCCGAA 1826785 37 100.0 36 ..................................... CGTTTCCGGCGTCCAGTTGACGCACCAACACGCCAG 1826712 37 100.0 35 ..................................... TCATGACCGCCAATCAAGCGAGACAACTTTGAAAG 1826640 37 100.0 35 ..................................... GAGGATATTTCCGACTTCATTCCCCGGCTTGGGGG 1826568 37 100.0 38 ..................................... GCCGCCGAAACGCCGTTCAGCAAATTTGCCGTCTTCGC 1826493 37 100.0 36 ..................................... CATCCTACTCGTCACGGACGCAGACGACATTACCCA 1826420 37 100.0 39 ..................................... TAGGCTCTTCCGCGAGCAACCCCTTCTCTCGGGCAACTT 1826344 37 100.0 37 ..................................... TTCTCCCGTTGCTGCCGCCATTACATCGTCGATTGTT 1826270 37 100.0 36 ..................................... ACTCAATGTGGCGACTTCTGACGCGACCACTTTCGC 1826197 37 100.0 37 ..................................... CTCTCACACCTACTTCCGGGCGTGCTGATCCTTAGTC 1826123 37 100.0 36 ..................................... GACGATGACGCGAATAATGAGCGGCAAATCGTGCAA 1826050 37 100.0 38 ..................................... TCCGTGTCGATTTACACTCATGTCGCCCGGCATATCCC 1825975 37 100.0 35 ..................................... TTTTCCATGACGCTCATTGTGGGTCGCGTTCCTTT 1825903 37 100.0 36 ..................................... GGCGGCGCCATCGTCGACTATGGGACTTTCCCGGAA 1825830 37 100.0 36 ..................................... TTCCCGGCCCGTTTTGATGGCGACCCCACACGGGAA 1825757 37 100.0 38 ..................................... GGGATTCAATGCCCTCCGAATGGGCGTCTTCGTGCCGC 1825682 37 100.0 37 ..................................... TACGCCATCCGGGCGTCACGCCCAAATCCGCAATCGG 1825608 37 100.0 36 ..................................... GGGACGACGGGGATTTGGGCGCCACGGAGGTCGGCG 1825535 37 100.0 36 ..................................... ATGGACCCGCGTGCCAAGATCCGGCACGGCCGCCGG 1825462 37 100.0 36 ..................................... TGGTGCGTGCCCTTCGGCGGGCGTTGGCGATCGGCG 1825389 37 100.0 35 ..................................... TGATCGATCCGGTCCACAAAGAGAACTGTCATGCA 1825317 37 100.0 40 ..................................... TCGTCACCCCGTCGATGATCTCGACGATCCGGTCGCCGAG 1825240 37 100.0 35 ..................................... TTCGACGGCAAGCCATCACGCACCGGATTGGGAGC 1825168 37 100.0 36 ..................................... TTGGCGTCCGGCGATATTGGCCATGAACACCCGCCC 1825095 37 100.0 37 ..................................... GATATCCTTCGGTCGAGTTGGCGTTACTCCAAGTCAT 1825021 37 100.0 35 ..................................... ATCCACGCGAGCGAATCACCGGCGTGCAATTCATG 1824949 37 100.0 35 ..................................... TCGGCGGTGATGCGGTTATTGTTGCGGCCAACGAA 1824877 37 100.0 36 ..................................... TTGTTGAGCAAATTCACGCGTCGATCAAAACTGCCG 1824804 37 100.0 37 ..................................... GATACGGACGGTTCGTTTCTTTTCGGTCGCCACAAAG 1824730 37 100.0 36 ..................................... GCCAGTGACAAAACCCCTTGAATACAAGGAGTTTGC 1824657 37 100.0 35 ..................................... TTGGCGGCCCGTGCCGCGGCCTTTTCGCGGATGGC 1824585 37 100.0 36 ..................................... TTGGACGAAAGCCCGGCTCACGGCCGGGCGGTTGTG 1824512 37 100.0 36 ..................................... TCCTTGCCGGTGAGTAGGGTAGTAGGTGGGGACGCT 1824439 37 100.0 37 ..................................... CACTGAGGGAATTGAGTATGAGCTTGCACAATTCCAA 1824365 37 100.0 36 ..................................... TCCAGAAGCGCCTCATAGCCTTTCTTGGTGACAATC 1824292 37 100.0 37 ..................................... CATCACCGGCCAGTCGGCATGTTTGGCCACCTCGTCC 1824218 37 100.0 37 ..................................... CTGGAGTTCACCAAACAGCCGGTGCCTGACTCGCTTC 1824144 37 100.0 37 ..................................... CGGCCGGTGGGTGGAAGGCCACGAGATTCAGGCGGCG 1824070 37 100.0 36 ..................................... TGGGTGCGCCACGCAATTGATCGATCTGAAAACAGG 1823997 37 100.0 36 ..................................... ACGGGCGACGAGAGGGACGCGGATCTCGGGGCCGCG 1823924 37 100.0 38 ..................................... AATTCGAGGAACTATTCAGCCTCGACATCGAACGTATC 1823849 37 100.0 37 ..................................... CTTCCGCAAAATGCGGAACAAAGTGCGGAAGTAACCG 1823775 37 100.0 35 ..................................... GTATCAGGTGGCCGCGCGGCCACCTGTGATTAGTT 1823703 37 100.0 36 ..................................... CGGGGAGTGGGAGGGCACGACCACGTAGCCATAATC 1823630 37 100.0 36 ..................................... TTCATCTGGATTTTGGCCACGTCATGAATCAGATGT 1823557 37 100.0 36 ..................................... CCATCGCCGTCCGGATCAGTTGTTCAGTCTTCATCG 1823484 37 100.0 36 ..................................... CTCCCTCGGGCAAGAACACGGGAGCGTTTCGGTGCC 1823411 37 100.0 38 ..................................... GACGCACGGCAAATCGAGGAGAGGCTATGTCCGATCAA 1823336 37 100.0 38 ..................................... GCGACGATCTTCCCGCCGATGATCTTGGCTTTCTTCGC 1823261 37 100.0 37 ..................................... TCAGCATCCGGCGATGAATCACACCCATCGGGGTCAG 1823187 37 100.0 37 ..................................... CCGTTGAATTTCTTCATCGATACCGTGCGGCCGTTGG 1823113 37 100.0 36 ..................................... TTGCATACGCTCCAGAGTGGTTACGATTCGCGCAAT 1823040 37 100.0 38 ..................................... ATGAGTGATTCCGGCCGGGACGGTCTCCGGCCGGAATA 1822965 37 100.0 35 ..................................... CGTGATCTTGGCGGGCAGGTGCAAGAGCGGGTGGT 1822893 37 100.0 36 ..................................... GCTAGCTCCGAATGACGATGTTCTCGAGGATAATGA 1822820 37 100.0 35 ..................................... TTCCGTTCGCGGCTGATCCGCTGCCAGATTGATTA 1822748 37 100.0 37 ..................................... TCGACGACGACGCCAAGGCCAAGGGCGGGGATACCAA 1822674 37 100.0 38 ..................................... TTCCCTTTTCGTCGCAGACGAAAATCCCCTCCTTGGCC 1822599 37 100.0 38 ..................................... GGTCTTCGGCCCTCGGCCGTCGTCGTCCGGCTTTCCCC 1822524 37 100.0 37 ..................................... TTTACGCTGGCGGCTTGCCGATGCCCCGAAAGATCGG 1822450 37 100.0 36 ..................................... TGCGGGCGCGGGCAAAAACACCCACGCTGTTCTCCG 1822377 37 100.0 38 ..................................... ACGTTAGGGGTTCCCCGAATTCACCCGGTTTGCAGGAG 1822302 37 100.0 38 ..................................... TCAACCATTGTTGACCACAGACCGTTAAACGTCCGGCT 1822227 37 100.0 35 ..................................... GATCGAATCGACAACAGTAGGGATTATTGCAAAGA 1822155 37 100.0 35 ..................................... GTCAATTGGTGCCTCGATCCAATGGGATACATCGA 1822083 37 100.0 37 ..................................... CTGGCGTCGGCAGAGCCGAGCCATTCCGGGGCGTTCC 1822009 37 100.0 35 ..................................... TTTCACCCCGAAGACGCCGTTGCCCTGCCGCCCTC 1821937 37 100.0 37 ..................................... CACGGCATCCCAATGCCGTCGGCAATCTCGCGGCGGG 1821863 37 100.0 36 ..................................... GTGGTTATCTTTCTTCTTCTGCCAGTCCTGTCTTAC 1821790 37 100.0 36 ..................................... GGATAATAGGTGCCACCGAGGTTCAGTGCCGGTGGT 1821717 37 100.0 36 ..................................... CCGGGGGCCAGAATCGTTTACAAGGCGGGAAACCAT 1821644 37 100.0 38 ..................................... CCGGCGTCGATCTGGCATGAGCCTCGACAACCGCCCTG 1821569 37 100.0 35 ..................................... GGGAGCCGGTCGGCCGGTCGGTTCGGGCCGGTACG 1821497 37 100.0 36 ..................................... TCCCGTCGAGCGGGGCGACACTGGCAAGAAGTCACG 1821424 37 100.0 36 ..................................... AACTCCCGACGACCGAAACCCATCTGGGCATCTTCG 1821351 37 100.0 37 ..................................... TTTCAAAACGGCGCGACGATGCAGGGTATCGTAACGC 1821277 37 100.0 36 ..................................... TGTGCATCTCAACAGCAAGCGCAACGACCGACGCAT 1821204 37 100.0 36 ..................................... CTATCCTCATACGTCGGCGTCTTAAATGGTACGCCG 1821131 37 100.0 35 ..................................... GGCGAGCATCGGCTATTGGCCTGCGCCGCTTTGGG 1821059 37 100.0 36 ..................................... AAGGCATACGGGTATATTGCCTTCACGGATAATCTC 1820986 37 100.0 36 ..................................... CGTACTATCTCACACATTGCGACAATGTCGGTCAAA 1820913 37 100.0 35 ..................................... CAAACGACGCAAAACGCTATCGTTGGCTACTTCCG 1820841 37 100.0 36 ..................................... AACGCCCGCCGTCCCAACTCTACCAAATGGTTGTAC 1820768 37 100.0 37 ..................................... CCCGCATGTTCTTGGTAGTGGCAACCGGCGTTACCCG 1820694 37 100.0 38 ..................................... TTTCAGGGCTTGGATGTGGAACGAAGGCTGTTTTCGCC 1820619 37 100.0 37 ..................................... GCAGGCTGACGATCCCCCGGACCGCTCCCCGGATGAT 1820545 37 100.0 36 ..................................... CTCGCCGCCGCCTTGATGCCCCATTGCTCCATCACG 1820472 37 97.3 37 .......................A............. TCCGACGGCCGGAACCGCCGGTTTTCTGGCTCGCGTC 1820398 37 100.0 36 ..................................... ACTTCGACATGAGCGAATCTCCACGGGGTTAAAATC 1820325 37 100.0 37 ..................................... TACTACGAGTTCACCGATGAAAAGCACACGGCGAAGG 1820251 37 100.0 35 ..................................... GTGATCGCCCATTCGGCTTCGCTCACTGATGCCGC 1820179 37 100.0 35 ..................................... GTGATGGATGCGTCGATGACGCTCCAAGTGGAAGA 1820107 37 100.0 36 ..................................... GGCCACGCCGAACCAACCGCTGACCAAGGCCGACGT 1820034 37 100.0 36 ..................................... CGTTTGCAGGGTTTCCATCGCCGTGCGGATCAGTTG 1819961 37 100.0 36 ..................................... GGGACGTGTTGAATTGCGAAGAACGGAAAATGGGGC 1819888 37 100.0 36 ..................................... GCTTCTCGGGTGTCTCGTCTTTTCGACGTTTACCCT 1819815 37 100.0 36 ..................................... ACGAAAACGGGAGTCGGGCATTTTACGAGACACGCT 1819742 37 100.0 37 ..................................... CTCAAAAATGGTTTCGGGGATGTTCCAACTGTCGATC 1819668 37 100.0 37 ..................................... CCGAGAACTGATCCACACCTGTGTCGATCCCCGTTTG 1819594 37 100.0 36 ..................................... TCCCCCTCTTCGCGTCGTGTGCAGTAGCGAACGAGC 1819521 37 100.0 36 ..................................... CGACTACAACGCACATCACCCCGCGACTTGCCCGAC 1819448 37 100.0 36 ..................................... CCGCTCCATTTACCGAAGTCGTCAATCCCCTTGACG 1819375 37 100.0 37 ..................................... ACTTCCCGCCCGTCAGCCCAATTGCGGGCGTTCATCG 1819301 37 100.0 37 ..................................... CTACTTCCCCGATGACGAACGCTGATTCAGGCAAAAC 1819227 37 100.0 36 ..................................... TTGCCAGAAGTAATGAAATGGGATTCACGAAAACGG 1819154 37 100.0 37 ..................................... TCGATGCAGTACGCGCAGGCCGGGTTGGGGGACGTCA 1819080 37 100.0 39 ..................................... TGGGACGATCTGGTTCAGGCGTTCGAGGACCTGTCCGAC 1819004 37 100.0 34 ..................................... GTGCTGATTGGTTGATACTTCATACCTTCGTCAA 1818933 37 97.3 36 ....................................A CCGAAAAAGGGCGGGCAGGATGACCGTCATGTCCGT 1818860 37 97.3 37 ....................................A CAAAAAGCCCTTGGCCACCTGGCTACCGTCCGTCGCG 1818786 37 100.0 36 ..................................... CTGGACTGGATCATTCGGGGTGGCGGCATCGGGGTC 1818713 37 100.0 36 ..................................... TGCCGAACACGATGCATGTCAGCGGCCGGGGGAAGT 1818640 37 100.0 37 ..................................... GGGCAAAACCGCCATCGCCGAATGTGCGATCATTTGG 1818566 37 100.0 37 ..................................... CCCAGGTCAAGAGAGAGCGGAAGAACCGGCGACGGAG 1818492 37 100.0 37 ..................................... TTCCGGGGTCAATTCCTGCCATTCGTCATCTGATTGA 1818418 37 100.0 36 ..................................... TGGCAAGGGAGAAAATCAACCCGAGCCATCTTGATC 1818345 37 100.0 38 ..................................... TTCCGCGAGCTTTCCCGCTCCATCCCCGACCGCACGCG 1818270 37 100.0 36 ..................................... GGCCGACCAGAGACGGTAGGGGAAAGCGGCTTCAAC 1818197 37 100.0 36 ..................................... GTGGTTAGTCGTGCCATCGCCGACGAACAACTTGAA 1818124 37 100.0 35 ..................................... CGTTTGTGATTCACAAAGGCAGAAGTTAGTTACTC 1818052 37 100.0 35 ..................................... CTCCCGTATCGGTGCCAGAAGAACGTGGAAAGGTT 1817980 37 100.0 38 ..................................... CATTCGTTTAAGTTGCTTTTTCACACGAGGCAATCCCG 1817905 37 100.0 36 ..................................... GGAGACTCTGACGAGGACGGTAATCCTGATCCCCCC 1817832 37 100.0 35 ..................................... TCGAGGGCTTTCTTCCGATGATCTAGGGCTGACAA 1817760 37 100.0 36 ..................................... TCGATCCACCCGTTCCGTCAAGTTCTTCCTGATCGA 1817687 37 100.0 37 ..................................... TCGTCGAAGTAGTATTCACCCGTGGGCATGTCGTCGA 1817613 37 100.0 37 ..................................... TCACGATGCGGCACGTTGCAGTACCCGTTCGCTAAGG 1817539 37 100.0 36 ..................................... CGGATGGGGAGATTCTGAAAATTGGGGCTGTCAGAA 1817466 37 100.0 36 ..................................... CAGATCACCGGCAATGCTTGAGGGCGTGCCGTCTAG 1817393 37 100.0 39 ..................................... GGAGGTAACGACTTCAAATAAGGAATGTAGTAAACGCCC 1817317 37 100.0 37 ..................................... AGTTGCAAGGCCCGGAAGTCAACCAAGGGCGTGGCCG 1817243 37 100.0 37 ..................................... GCCGCCCGCACGATCACACGCGGGGCGTCACTTCCAC 1817169 37 100.0 37 ..................................... GCGTGTGGCATCCTCGAACGGAGCCAGTCCGAGGATG 1817095 37 100.0 39 ..................................... CCCCCTTGAATTCCGTCACTGGAAGTCGGGGCAATTGGT 1817019 37 100.0 37 ..................................... TTTGAGCCGCGAGAACTCCACGGCAACCTTCTCGGCT 1816945 37 100.0 36 ..................................... TGGAAAAGATGATCCAAGAGCAACCCTTGGATTCCG 1816872 37 100.0 36 ..................................... TTGGGGACATTGAAGACGCCTTCGCACCGCAAGGCG 1816799 37 100.0 36 ..................................... CGGCCTGCAATCATCTCGGGGTCAAGCCCAAGGTAA 1816726 37 100.0 35 ..................................... CGGTATTCGGGGAATCGCACCTTTCGGCAGGAGCG 1816654 37 100.0 36 ..................................... GATGGTTCGCAGCATGTCGGTGATGTGCGACTATTC 1816581 37 100.0 35 ..................................... GCTCCGAAACTCCACCTGACGATCACATTGGAAAA 1816509 37 100.0 36 ..................................... CCGGACGTGCCGGTGAGCGTTCGCCCGGCGTATGTT 1816436 37 100.0 38 ..................................... GTGACCCTGAGTTTTCCGGTCCTCACAAGATGGTCGAC 1816361 37 100.0 38 ..................................... TCTTCGCCCTTCGCCTTGCGGGCGAAGTAGGCGTCGAT 1816286 37 100.0 37 ..................................... TTTGCGTGACGCAAGAGCCGTTGGCAGACGGTGCCAT 1816212 37 100.0 38 ..................................... TGCGCAAGTTTATTGAGACAACCTCGGCGGCTCGCAAG 1816137 37 100.0 39 ..................................... GGCCATCCGCTCGGCCACGTCCCACACCCGCCGATCCTG 1816061 37 100.0 36 ..................................... AGCATTGTGAACGTCGACACGGCGGTGGAGCGGGTG 1815988 37 100.0 39 ..................................... GCGGGAGACATCCGCATCGTGGACTGAGCCGGGGCGGGT 1815912 37 100.0 38 ..................................... CGGGATCTCGGCGGACAGGTCCAAGAGCGGGTCGTCGG 1815837 37 100.0 37 ..................................... TTCTTGAGAATCTTGACGATGCCCGCACGGGTGATCG 1815763 37 100.0 35 ..................................... AACCAAGTCGGTCGTGATCGGCCCGGCACTGTTTC 1815691 37 100.0 37 ..................................... AGCGATTCGTCCGGCTGCGGCGAATCGGGCTGCTGTG 1815617 37 100.0 38 ..................................... GCCGAGAAGCGACACGGGGATTGTGACCGTCTTCTCGT 1815542 37 100.0 36 ..................................... CCTGCATGGCCCCCCGCACGAAAGGACCAAAGAAGT 1815469 37 100.0 38 ..................................... TGAGCAACAGTTATGAGTTCCCGTCGTCCGGCCCGACA 1815394 37 100.0 38 ..................................... CAACCTGATCGGTGACCGGCTTGCGGGCCGGTTCGCCT 1815319 37 100.0 37 ..................................... CACCTTGTCAAGTGGTGCGGCAGCCGGGAGAGACCGG 1815245 37 100.0 36 ..................................... GGGATCTTCGGGCACCATTCACAACGGGGGCCGCAA 1815172 37 100.0 34 ..................................... GAGCTACGCGGCCGAAATTGTCCGCACAGTTCAA 1815101 37 97.3 35 A.................................... TGAACCGTCCACCATCACACCAGCGGAGTTTGACA 1815029 37 97.3 36 G.................................... GCACTTTTCGGCCGTGAACTTGGTCTGTCGTCCCCT 1814956 37 100.0 34 ..................................... TTCTTCGCCATGTCGTGAACTCCAACTGGTGTGA 1814885 37 97.3 38 T.................................... ATCCGGCTGTCGGCCCGGCCGCTCGACGCCGACGACAA 1814810 37 100.0 35 ..................................... TTGCCGACTTGCGTTGTCTGGCGGGAAGCTGACGC 1814738 37 100.0 37 ..................................... ACATGTGCCGCGAAGTCTACTGGTCGTAAGTGACTGT 1814664 37 97.3 36 G.................................... CTGATCCACCGTCTGCCCCCCACCATCAGGGAGGCG 1814591 37 100.0 35 ..................................... CCGCCGGCGGCGGCATTGGATTTCTTCGAGTCACT 1814519 37 97.3 34 G.................................... CAGCAATTGGACGGCGTGGTCATCGAGTGGGCTG 1814448 37 94.6 0 A.G.................................. | ========== ====== ====== ====== ===================================== ======================================== ================== 218 37 99.9 36 CCATTCCATGACATCACCGTCGTGGCCGAATTGAAGC # Left flank : GAGGAACCGGAATCCAACCGCCTCCGCGATCTCGGCGTGACCGCCGCCTTCCGTCTGCAGCGCATCCTCGTGGGCAAGACCCCGAACTTCACCACCGCCCGAGCCGTCGTATGATTTCCCCTGATGAATGAGGAACCGACGCCATCCCGTCCGAGAAAAAATAATCCGCCTCCGCCCTGTTTTTGAATATCCCCCGACCCCGAAAATCCGTTAAGATACCCGAGAAGCCCCGACCAGAGCCTCATTGCGTCCAAAATCGCTCCGCGAGACGCCCGGTCATGAAACCCGACTCGGAAGCCCGCCCGTTCCGAAGTTCTTTGACATCTTTGACTAACAATGATTTCGCGACCTCACCCCCCACTCGCAAATCCAAAAGCTCTTGTGACAAAAGACTTGCGACGCGGGGGCCATTCCAAAAGAAAGATATTAATGCCTACGCCTCATCCCGCTCGCAACACCGACTTAAAGTGCCAACAAGATCACCACTTACGCCAAGAAGG # Right flank : TAATTTGGCCTCGCCTTTAGTGGTGCATCCGCCAAGTTAACGCACAGATGGCGGGGTGGCGACGCCGGTCGTCCGACGGGGCCGGTGGCGTCGCCGCCGACCCCAGTGAGACGGATGTCGGTGCGCGTTCCAGTAAGCCGTCGCCCGGTTCACCGCCTCAACGATCTCCTCCTATGTCCCGAACCGTCGGCCCTTGAGCGCCAGGGACCGCAGGACCTTCCACCACGGCTCGATCAGGTTCAAGTAGGCCGCCGCGACCGGCTGGAAGACAAACTCCCATCGCGGGTACGCCACGTTGAACAACAGCACGTCGCGGGATCCGTGGGCGGCCAGGTTGTCGAGGATGGCATAAACGCGATTAACGCCGGTCGGCAGCCATCGCTCGACCCGCTCCAGAAAACCGATCCAGTTCTCGCCGGTGCGACGTGAGTACGACTGAGTGAACGCCTCCCGGTGGCGGGCCGGAAGGCCCCGAAGACATAGCCCTTTCGGGCATGCCT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCATTCCATGACATCACCGTCGTGGCCGAATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.70,-9.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA //