Array 1 168-5 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOWD01000045.1 Anaerocolumna aminovalerica strain DSM 1283, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 167 30 100.0 36 .............................. TTTAGAAAGCGAGGCATTATAATGGCAGAAACATAC 101 30 100.0 37 .............................. ACAAGCGAATCCGATTGATGAACTGGATTTCCAGGTT 34 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 3 30 100.0 37 ATTGAACAATAACAGATGTTGTATTGAAAT # Left flank : AACCATTTAATCTAAAGGAGAAACGATAAATGAAGAAAAAAGAAAATTATAATTATAATTATGCTTTTCTTTTTTATGATGTTAATGAAAAAAGAGTTGCAAAAGTCTTTAAAATATGTAAAAAATATCTGTCCCATTATCAAAAATCTGTATTTCGTGGAGAGGTAACACCCTCTAATCTATTGCTATTAAAAAATGAACTTAATAAGGTGATTAATATGCAGGAGGACTTTATATGTATCATTAAATTAAAAAATAATAATGTTTATGGAGAAGAAGTATTGGGAAATCAGCAATATGACACAGGTGAAAGCTTATTAATTTAATTTTACCAAGCTACAAAATTCTAAAGTAGTGGAGATATGCATAAAATAAGGCACTTGTACTTGTTTTACTTAAAATCACGCATTAATTAGAAAGCCTGGTAAAAAAATGATATTTCATTGATTATTAAGGGATTATTAGGTATAATTAAATTATAGAATGGCTTATTTTCTAGG # Right flank : TCTTT # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACAATAACAGATGTTGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.20,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [5.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : NA // Array 1 11405-10266 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOWD01000069.1 Anaerocolumna aminovalerica strain DSM 1283, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 11404 30 100.0 36 .............................. TAATTATTTAATGGATATTTTTTTGCATTTTTAACC 11338 30 100.0 37 .............................. AGGATTGTTTTTACTTGGTTAAAGTCTACCGATTGAA 11271 30 100.0 35 .............................. ACGAAGGATTGACTGGAAATGAATTTTTCTTTAAT 11206 30 100.0 36 .............................. CTTTCAAACATGCCAACATCTCCAACATCCTCTATC 11140 30 100.0 36 .............................. GGTATTCCTGATTTTTGATAGCCACCACCCCATATC 11074 30 100.0 35 .............................. GATAATTTGCGATTACTACCTCCGAATACATGGTG 11009 30 100.0 35 .............................. GTAATTACTTCTGTTTCTTCTGATTTGTCATATTT 10944 30 100.0 35 .............................. GGGATTACCGTAATAAAAGAGATGTATGGACCGTA 10879 30 100.0 34 .............................. ATTAAAAGAGTTGCAGAATACCGTATCCGGATTG 10815 30 100.0 35 .............................. CCGCCCAAGAATTGTCCATTTTCAAGTTTAAGCCC 10750 30 100.0 34 .............................. TCATATGGTTTTAACAATTTCCCAGTTTTCTTGG 10686 30 100.0 34 .............................. TTTATACCAGAAGTCATATTCTTGAAGGCACCCG 10622 30 96.7 35 .............G................ GTAGAAGCGCCACACGAATACTTATTTGCACGTGT 10557 30 100.0 35 .............................. CAAATGTGTCGCGATAAAGGCATATATGGTTGCGA 10492 30 100.0 37 .............................. TTTACTGAACTAACGCTCGTTGTGCTATAGCCTGCTA 10425 30 100.0 36 .............................. TCCCTTGTCAGGAATACTCCTGCATTATCAGTACCC 10359 30 100.0 34 .............................. AGTGGACGACCGAAAGAAAAGGTTCTCCTGGTAT 10295 30 93.3 0 .....G........A............... | ========== ====== ====== ====== ============================== ===================================== ================== 18 30 99.4 35 ATTGAACAATAACAGATGTTGTATTGAAAT # Left flank : TTGA # Right flank : ACCAAGATGTTTCATCCCTACAGCCCTACAGGCAGAGCTAGATAGTTGAACAATAACAGGGTATTAATTAATAAAACGATATCAACGATATCAGATTCCTGAATAAAAAGGATATAGAATCCTTTTTGAATTAATTATAATCAGTAATACAGCTAAAGCAATGAATGAAACCAACTTGCTTCTATTAATAACCACCTTTATTTCCGAAACTTAGTCTATCATTGTTACAAGCCAACATATAATTAATATAACAAATCAATTGAGGCCATATATGATTATATATGTTGTACAATCCGGAGATACAGTGGATTCCATTGCTGCTAAATATGGTATATCAGTTACAAGGCTAATTCAGGAAAATGGATTAAGAAGACCTTACAACTTGGTAGTAGGGGATGCTTTGGTGATTCTTTACCCAGAAGTAATCCATACGGTTGTGGAAGGTGATACATTAGAAGGAATTGCTGCATCATATGGAATTTCTTTAATGGAATTACTCC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACAATAACAGATGTTGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.20,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-6.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : NA //