Array 1 27831-28389 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQYP01000027.1 Campylobacter rectus strain OH2158 scaffold_26, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 27831 30 100.0 36 .............................. TTGGGAAACATTAGACAAAAATAATAAATGGGGCGG 27897 30 100.0 35 .............................. GCTCTTTAGCACGCTCGTTTAATTCAGCGTCGGTA 27962 30 100.0 37 .............................. TAGCAATCGAAAAGATAAGGGATAGTGTGCGCAGGAA 28029 30 100.0 36 .............................. CGCAGCAGTTGGTGGGCGTAGTCAATGACGGCATTG 28095 30 100.0 36 .............................. CTCGAAATGGCTCTAAAATTTGAGCCGTCGTAGCCT 28161 30 100.0 37 .............................. ACGCCATAGCTAACGGCATAAAACCTACTTTAGACAA 28228 30 100.0 37 .............................. ATAGCAGGGCAAGTCGTAGAAGTCGAGGAAAACGGCA 28295 30 100.0 35 .............................. ATAAAATTCGATTAAAAATCTTAGTCGGTGCTTGT 28360 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 9 30 100.0 37 GTTAAAATTTACTCCGTTGGAGTTTGAAAC # Left flank : AATTTGATATTTTGTCTGTAAGGAGGCAAGTGTCTTGGTTGCATTTTGATGATTTGATTTTAGAGCCTTGACTTCATCAAAATGTGGCAAAAAACCGCTACGCATTTACGGTCAAATTTGACCTATGCGCCTTTGGCTGTTTTGCTCTCAGCGTTGAGAAAATTCGCATCAAATTTGACTTATATGTCTTTGCCACGGTATTGGTTTTTGCACTAAAACGGCGTTTGTGATAAAATATAAAATGCACCCGACTTATAAAATTTGCTTTGATCGCTATAGCGGGTTGAATGTTGTTAATTTGCTCTTACCGTAACGGGACATTTGATTTCTAAGTGTCCTTTTTAAATCTAAACTATGTCGATAAAGCTTTTTCTAAGATTTTAGAAATGATGAAATTTAGGGTATTTCGTATCGATACTATTTTGCTTTTTATACAAATTTAAGGCGTAAAAATATAGACTTCGAGTTTTAATAGCCCTAAAAATGCATATTTTGGTGCT # Right flank : TCAATATTATTTGGATATTGATAATGCTCAATATATAGTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATTTACTCCGTTGGAGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 1 4610-3979 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQYP01000023.1 Campylobacter rectus strain OH2158 scaffold_22, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 4609 29 100.0 39 ............................. CTAACTTCATCTTTATCAACATTTTCACCCTCTTTAACC 4541 29 100.0 36 ............................. CAGGAGTATCTCGGCAAGCTGAGTCTAGGCAACAGA 4476 29 100.0 36 ............................. CTGGATATCGTTAAGACAATGGGCGTGTGGAATGCT 4411 29 100.0 38 ............................. CTCGGTTGGCTTTGAGTCAAATAGGAAAAATTCGTAAG 4344 29 89.7 38 ...............GCC........... CTTAACTCCCACCATAGATCCTATTTGATCTATTTCAT 4277 29 96.6 37 ............................C GCGGTGTCGGGCTTATGTTCATTATCTCCGCTAGCTC 4211 29 89.7 38 ...............GCC........... CTTTGTGTCGCTTCGTTCATCGCCGTTTGGCAAAGCTG 4144 29 89.7 40 ......................G..TG.. ACGAGAGCGAGGAACGTGTTTGGCTAGAGGTGAAGTATCC 4075 29 96.6 38 ......................C...... CTGGGCATTTATTAAAACGCCCACCCGCATTGGAAAGG 4008 29 82.8 0 ...............G......GA..G.T | A [3988] ========== ====== ====== ====== ============================= ======================================== ================== 10 29 94.5 38 GTTAAATTTTACTCCTTTGGGGTTTGAAA # Left flank : TATGGATTTACGGTAATGCTTTTTAGAAACGACTACCTTAAGCACCGACGCTTTCGGTGTTTGAGAGGATTTATGACTACGGGCTTGAGTTGTTTTGATTCCGCATTTTTTAGGTAATTTTATTGCGGTGCATCGTAAAATAGCCTCTATGCGTCTTGAGATTTTATTATTTGACGGCTCGAACGGCTTGCTAAATTCGTATCGAGATATCGGACTTTAGGTAAAATAATCCGCTGCCGCTAAACGCTTTGGCTTCGTGTATTTAACTCGACTTTGGATAAAACGATCGGTTGTAGATGATTTTGCAATGATGCGGCCGGTTTTATCGCTTGCATTTTTAGGCGCGCTTGAGTTATGCCGATAAAGCTTTTTATAAGATTTTAAAAAGGGCGAAATTTGGGGTGTTTCGCGTTAGTTTGGTTTTATATTTTAGTCAAATTTAAGGCGTAAAAATATAAACTTTTTATTTTGATAGCCATTAAAATGTATGTTTTAGTGCG # Right flank : GAAACGCATATCGGCCAAGTATTTCGGGATTACCGCTACTCTAGCGTGGTTTTTTATAGCTCCGCCTGTGGTTATTTCGTCTCTTACATCTGCCGCATATACGGCTTTAAATTCGTCAGCTAATCTTTTTAAAGAAACCTGCTATTTCGTAGCACCGCTTCGCTTGTTTTCTGTCTTTATGAGATAGAATTTAAGCCTTGGGGAGGCGATGAGCCTATAGCCTTACTTATCCCGCTTAGATTATCCGTAGAGATTATTGAAATTATGTTGCAAGTGATACGCCTATTGCTGCAAGTAAATTTTAGTATGTCTATGGGGTCGCCGTGGCTTTTGTTATGGTCTAACCGCCAACTGTATGTTTATTATTAAATTAATATCTCTTTCAAGGCGAGGTAAATTTAAAATTTCTACTTTTTAACAAAGTAGAAAAGTAGCATTTAAGAAAATAATATAAAATTTTTTAAAAAGTCTTCTTCCTTAAGTTTTTTGCAAAGAGCAGA # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAATTTTACTCCTTTGGGGTTTGAAA # Alternate repeat : GTTAAATTTTACTCCGCCGGGGTTTGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.90,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 1 76123-75831 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQYP01000008.1 Campylobacter rectus strain OH2158 scaffold_7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 76122 30 100.0 36 .............................. AAAAATAAGAAACTCAAGGAGTAAAAAGAAAAATGT 76056 30 100.0 36 .............................. AAGCGGCACATCAGTGTATAAATCTCAAAAGATTAA 75990 30 100.0 34 .............................. CTCGGGCGACGCGATGAGCTACTCGGGAGAGGAG 75926 30 86.7 36 .............TT...........AC.. TTTGATTCCGCCAGCATCAATGAATGAGCATTTCTT 75860 30 80.0 0 .............T.A..........AGTT | ========== ====== ====== ====== ============================== ==================================== ================== 5 30 93.3 36 GTTTCAAACTCCAACGGAGTAAATTTTAAC # Left flank : AAAGCGATATTTGGGATATCGGTCAGCAAACGATGAGCGACGCGATCTGCGTAGGCGGGGCAAAATTTGAGGATGTAAAATTTACTATCGAAGACTTTGAGATCGAGTTTATGCACTTTCCGGGACATACGCCCGGATGCTGTATGATACGCGTGGATGAGGCGATTTTTAGCGGCGATTTTTTATTTAACGGCTCGATCGGGCGCTATGATTTTTTGTTTTCAAACGCCGAGGATATGCGTCAAAGCTTGCTAAAATGCAAAAAAATGCAAGGGGACTTCACGCTATATCCGGGTCACGGCGATAAAACGACGCTAAAAGCCGAGCAGGAAAATTTGGACTTTTGGATAGAACGGCTCGGCGAGTAAAATGGGGTTTTGGCCGGACGAATTTGCGCTTTGGCTCTTTAAGAAATTTTCAAGAAACGGCGTAAATTTGAGGCTAACCAGAGAGTAAAATTTAACTAAAACCTTTTTGACGATTTCCTGCTTTTCCTCCTC # Right flank : TTTACTGCTTAAACCGAAATTTCGACTATCCAAATAAGCCATAAACGAACGCGCTCGGTAAAATAGTATTTTGTTAAAAACAGCGATAAATTTTCGTAAATTTTGAAGCTAGTTTAAAATCTTGTCAAATTTAACCTCAAATTTGGCGCGGTAACCTCAAGCTAAATTTTACGAAAAAAGTTAGAAAAACTCAAATTTTAACATCAAATTCGTGCGGGTTATCTTTCAAAATGCTGCTCAAAAATGCGTAGCAAACGACAGGTAGCAATAAAAACGCCGAAACTAAAACTTAAATTAAGCCGCTAGGATGCAAAACTGTAAACGCCGGCAAAAACGCATTGCCTCCCAAAACGCCCAAAATAAACACGCTCCGACCGGCACCGCTAAATCTCGCCTCAGAAAATCTTAAACGAACTATATATGTATCAAGTTCTGTTTATCTTTGTATTTTGCGGTAGAATATCTTTATATTAATTTTTATATTTTACCAACTTTTAATA # Questionable array : NO Score: 2.72 # Score Detail : 1:0, 2:0, 3:0, 4:0.66, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAAACTCCAACGGAGTAAATTTTAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 1 33987-34808 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQYP01000016.1 Campylobacter rectus strain OH2158 scaffold_15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 33987 30 100.0 36 .............................. GGTGATAAAAGTCCTGCATCGTAGATATAAAATTAA 34053 30 100.0 36 .............................. ATATAAATTTCTTGCTGTGCCTGCGTGCGCTCGACT 34119 30 100.0 36 .............................. GACGATTGCTGCGCAGAAAAAGCCGATTGCGTAACA 34185 30 100.0 36 .............................. TTGAAAATGGTGACTTAGATAAGCGTGAAGTCTCGC 34251 30 100.0 37 .............................. TGCTCACTGCCATCACTAGAACCGTCACCAGTGCCAC 34318 30 100.0 34 .............................. GTAATGCTCACGCTATGGGCGCCAATACCTACGC 34382 30 100.0 37 .............................. TCAAGGGCCTCAGCCGTAGCCGTGAGGCCTAAAACCT 34449 30 100.0 34 .............................. CTCGCCGTGTGCTTTTTGTTAACGTTTTAGTTGG 34513 30 100.0 37 .............................. ATAACACAACATACACCATTTACTTTAGAACCATTTA 34580 30 100.0 36 .............................. CGGGAAAAACTCCTCCTCAATCGAGTACTTGTTAAG 34646 30 100.0 35 .............................. TTCACAGGTGGTAATTGATATAAATCCCCTACAAA 34711 30 96.7 37 ...............A.............. ACCGCTACGCCGTCAATCTCGCTAAAATAGCTTTGCT 34778 30 86.7 0 ......................C..T..GT | G [34796] ========== ====== ====== ====== ============================== ===================================== ================== 13 30 98.7 36 GTTAAAATTTACTCCGTTGGAGTTTGAAAC # Left flank : GATGCGCCTTATGAGGGATTTAAGTGGGGGTAAATTTGATATTTTGTCTGTAAGAGGCAGCAAGTATCTTGGTTGCATTTTGATGATTTGATTTTAGCGCCTTGACTTCATTAAAATGTGGCATAAAAACCGCTACGCATTTACGGTCAAATTTGACCTATGCGCCTTTGGCTGCGGTATTGGTTTTTGCGCTAAAACGGCGTTTGTGATTTTGCTTTGGATGTTTGTGATAAAATATAAAATGCACCCGACTTATAAAATTTGCTTTGATCGCTATGGTGAGTTGGATGTTGTTAATTTGCTCTTACCGTAACGGGACATTTGATCTATAAGTGCCCTTTTTAAATCTAAACTATGTCGATAAAGCTTTTTCTAAGATTTTAGAAATGATGAAATTTAGGGTATTTCGTATCGATACTATTTTGTTTTTTATGCAAATTTAAGGCGTAAAAATATAGACTTTGAGTTTTAATAGCCCTAAAAATGCATATTTTGGTGCT # Right flank : TCCGGTGTCGGTATCCCGCCAAGCTTGCAAAATCCTCGGTAAATTTGCGCAAAATCGCCCATAAAACAAGCTTAAGCTAAATTTTACAAAACCGCGCACAAGACTTGCTAAATCCAAAAAGCCAAACCGCCGTTTAAATTCGTAAAATAGCGTAGAAAAATCACCCAAACCAAAAACACATCGTTCAAATTCAAAATCCGTTACAAAAAACCGCTTGTCTCGCCAAATTTAACCCCGGTAGCTCAAAATTTACACATATTTTTAAGTTCGGTTAAAAAAATTTTATTATTTATTTTAGTTTTATATTTTTTTAAATATACTTGAAAAATTTTAAAAATTTAAAGGCAAATCTATGCTCACCGACCTCGTAAGCTCTATAAATTCGTTCCTTTGGGGGCCGTATTTCCTCATCGCGCTGCTTTGCGGTACCGGACTTTACTTCACGATCAGGCTGCGTTTCGTGCAGATTTTTAAGTTTAAAATGGGGCTTCATAGGCTTT # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATTTACTCCGTTGGAGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 1 52-2588 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQYP01000009.1 Campylobacter rectus strain OH2158 scaffold_8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 52 30 100.0 37 .............................. TCAATATTATTTGGATATTGATAATGCTCAATATATA 119 30 100.0 35 .............................. TTTAAATAAAGATGGTGTATTTGAAAATAAAGAAA 184 30 100.0 34 .............................. GCTTGCTCAAATTCACCCGAATAATATTGAAGTA 248 30 100.0 34 .............................. TTAGGATATGAGCCCATGCTACTATCCTATACCA 312 30 100.0 37 .............................. TCCTTAACAAGAGCTCTAAAAGTAAGCCTTGTAAAAA 379 30 100.0 37 .............................. GTGATTTGTGCGCGATATTAAATCATCAGTGGAATTT 446 30 100.0 38 .............................. TTCGTCATCCGTGCGAATATCTAGCGTAAACGTTTATG 514 30 100.0 34 .............................. GGGCAAGGTGATTTTTTTCTTGGTTCTTGTAAAG 578 30 100.0 38 .............................. TCGCCATTATTATTACCACCACCTGAACCAGGAGTGGT 646 30 100.0 37 .............................. TGGCTAAAATTTGCGGCCATAGAGAAGTCAAGCAAGC 713 30 100.0 36 .............................. AAACTTTTATAGATACTCCTCACTTTGAGAGGCATT 779 30 100.0 37 .............................. GTATTGCGACCAGTGAAAGCTGGACGGATAAAAATAC 846 30 100.0 37 .............................. CCTAGAAATGTTTTCTCACCTAATACTTGACTTCTAT 913 30 100.0 37 .............................. CTTAATATAACCATTGCTTCTTTAAAGTCCTCATAGC 980 30 100.0 36 .............................. GTAACCTAAAGCTACGGGTTAGCACCACCGCAGAGG 1046 30 100.0 36 .............................. GTTTCAAATACACCAGTTCCTACTAGTTTTCTTTCA 1112 30 100.0 34 .............................. AAAGGATCAGAACCTTTAGCAAACATAATGTCTA 1176 30 100.0 36 .............................. CCGAAAATATCCCGAGCGTAGAGCCGCATCCGGACT 1242 30 100.0 35 .............................. AGATACGGTGGCAGGATGGGTCGGAGTCGAACCGA 1307 30 100.0 37 .............................. AATTTAAAGAGTGCGGCGTATGCGGCCGCGTAAATGA 1374 30 100.0 36 .............................. AACCATATTCGTGTAAATTTAACCCCTCACGCTGCA 1440 30 100.0 36 .............................. ATCTTTTTCCTCAATTGCATTTCAATAGGGCTAAAT 1506 30 100.0 34 .............................. AATCCGACCCATACAAAAAATCTTCAAGTAACAT 1570 30 100.0 38 .............................. AGATCTAATTGTAGATGAGTTACGTCAAACATCTTTTT 1638 30 100.0 36 .............................. TGCCGTCGCCTTTGGTGATAGCTGCGAGCAAGTTGA 1704 30 100.0 36 .............................. TAAAGTCGTCTGGATTAAGTAGCTTAAAATCAGAAG 1770 30 100.0 34 .............................. GTAGCCCCGTCGTGCTTTTGTCCAAAGCGTTCGC 1834 30 100.0 36 .............................. AAAATGTCAAGAAACGTCATTAAAAAAAACACCTTT 1900 30 100.0 36 .............................. AATATCGCGCGCCAAACTTTCTACTACCATAAAAAA 1966 30 100.0 36 .............................. ATCGTGCCGACATAGTCGCTATCGAATTTGCCAAGA 2032 30 100.0 35 .............................. ATTTTATCAATGCGTGCGTTAATCTGCCTCGCGGC 2097 30 100.0 37 .............................. CTATCTCCACCGTCACGAACGTGGCTCCGCACTGCGG 2164 30 100.0 37 .............................. TGAAATTTAGAGGCGTCGATTTGATGTTTCGCAAAGA 2231 30 100.0 34 .............................. GCATTTTTTCGCTCCTCAAATTTTGATTTTTTTG 2295 30 100.0 35 .............................. CCTAAAGATAAAATTTTAATAAAAATATGGTAAAA 2360 30 100.0 38 .............................. GATTCTTCCTGTACTTCCTCAGCTTGAGACTCTTCAGG 2428 30 100.0 35 .............................. ACAAAAACGTCCGAGATTTTGTTTCGCAGGACATG 2493 30 86.7 36 ..GT............A.A........... AAGATGCTGTAGAAACTATAGGAGAGAATGAGAAGC 2559 30 90.0 0 ..GT............A............. | ========== ====== ====== ====== ============================== ====================================== ================== 39 30 99.4 36 GTTAAAATTTACTCCGTTGGAGTTTGAAAC # Left flank : CGTTGGAGTTTGAAACATAAAATTCGATTAAAAATCTTAGTCGGTGCTTGTG # Right flank : CAAATTCATAGTTCGGCATAATGGCAACGCGCCTATTGTTAAAATTTACTCCGTTGGAGGAAGGGTGAAACTCTCAAAGCTCACGTTTTTGGCCTTGCTTTGGCGTTAATTCTTCTTTATCGGAGCCAAAGCGCTTTTGGATTCATTTAAGCGCTTAAATGTCCGTCTCGTTTTATTTCCTCGGGTCCTAAAACCGCCGAGCAAGCCGACTCCGCTTAAATTTGGCATCTCGGACATCGTCGCCCAAATATTTCGATCCATTTTGCCGGAGAAAAACGTACGTCAAAAAACCGCCAAAACAAATTTCACTCGTCAAACAGCCCTTTCTCAAAGCTTTTCACGCGAAAACTACGCCTTTGCAGCGGCGAGTCGCCCAGCCTCGCGATCGCGTCCAGATGCGCCTTCGTGCCGTAGCCCTTATGCGCGGCGTATCCGTAGCCAGTGTGCACGCCGTCCCACGCCCTCATCAGTGCGTCGCGGCTTACCTTTGCCAGGATGCT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATTTACTCCGTTGGAGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //