Array 1 15851-16546 **** Predicted by CRISPRDetect 2.4 *** >NZ_SUMC01000101.1 Streptomyces sp. NEAU-C40 Scaffold101, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 15851 28 100.0 33 ............................ GGCGAGCCAGACCACTTCCGGCGTCCCTTCGGG 15912 28 100.0 33 ............................ GGCATCATCGTGCACGCACCGGAGAGTCACGGA 15973 28 100.0 33 ............................ GGTGCGAGGGTCCCGGCCGGACTCGTCGATCAC 16034 28 96.4 33 ......................C..... CGCGTCGGCGACGCCGGCGTTCCCGTACAGCAC 16095 28 96.4 33 ......................C..... CGACCCTCCTCCGCCCGACCAGCGGACCGGCTT 16156 28 96.4 34 ..........................C. GGGCTGCGCTCACACGGCGACGGCCTCATCGAGC 16218 28 100.0 33 ............................ GGTGCCGCTGAACGAGACGGTGCCGGGGCCGGA 16279 28 100.0 33 ............................ CAGCTACTTCGGGAAGGGCTCCGGCGATCCGTG 16340 28 100.0 33 ............................ ACCGTCGCAGCTTCCGGCGACGCCGCTGTCGCC 16401 28 96.4 33 ..................T......... GCCACCGAACGCGCCGACGCCCTCGCGGTGGAG 16462 26 92.9 31 ..............--............ GTTCCCCCACGGAGACAGATCGAGACCCGTG 16519 28 78.6 0 .....T.......AT..ATA........ | ========== ====== ====== ====== ============================ ================================== ================== 12 28 96.4 33 CTCGGCTCCGCGCGCACGCGGGTGACTC # Left flank : CAGCCCACCCACACGGCACACGACAAAACCACCCGACAAACCCCGTAGAACACCATCTGCAACACACCGGCACGCGCCCAGAACAGCGGCGCTCACCACGCAGCATGGGAAACACCCGGACACACGAAACCCGCCTCCGCCCACGACCACCCTCACCGAGAAGAAATCAGAAAATCAACAAACGTCAAACCACGAACCACTCCGCATAATCCAGCGCCCACAGGTTTCACATCGCCTCGCCTGGAAAACACTCTAGAAACACACGAGGCAACCATGAAAACAGCAGCCCGGAAACCCAATGAACACCCGAAAGAGAACACCTCAAGAAAAGCAGAGATGCGAAACAAGGAAGAAAATCAGACCGGGAGACTCACAGCGCACAGCCCGTACACCGCACGGGCAACACCAGCACCGGACACCGACCCCCGGCAGACACCGTCAACCTCGCACGACCGAAGAAAAACAACCCCTCCCCCGGAATAAACCACAGGTCAGCAAGC # Right flank : CCGGGCCGGCCAGCCGCATCCCAGATCCGGCCCTCTCCGCGCACACCCGGGCATCTCACACCATGCACAAGTACCCCAGTCCCAAACGCGTGGCCGAATCACGGCAAGACGGGAGCGCTATAGGACATCTCACCACTCTGTCCTGCGATTTCTCACAAGATGTCTCTAACGGACACCTCACACATCATCACCTGGCACAGGAAAACCCGCAGGTCAAAACAATAACCGGGCGACCCGCTGTGGACATTTGGATGAGAAACCAGCAGGACATCTCCGCGAGACGTCGCACCCTCACGGCTGTTGCCTCGCCGATAGGGCATGACAGAGGCCATGCGGACGGGACGCTGGGGGCCTTGCAGCGTTCCTCGGCATCCGGCAGATCACCGCACAGGACGCCGGTCGCATCGATCGTTCATTGCCACCGGCCGACGTGCACTCCATGGTCATCTCCCTCGCCATGACCTGGTCCCCCAACAGCCTCAGCTACACCGCCACCACCA # Questionable array : NO Score: 2.96 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.88, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCGGCTCCGCGCGCACGCGGGTGACTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.80,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 36407-35953 **** Predicted by CRISPRDetect 2.4 *** >NZ_SUMC01000073.1 Streptomyces sp. NEAU-C40 Scaffold73, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 36406 28 96.4 33 A........................... CTGCACCGCCAGGTCGCTCGACGAGCCGATCGG 36345 27 96.4 33 .....................-...... CGAGTGGAATGACGTCACCGAGCAGACCCGTGG 36285 28 96.4 33 ...........A................ CGGTGCGCGGGGTGACGCCGTACGCCTGCGCCA 36224 28 100.0 33 ............................ CGCGCTGCCGGTCCTGGCCAGCACCGCCACCGT 36163 28 100.0 33 ............................ GGACTCGATACCGCCGGTGGCCGAGGGGGACGT 36102 28 100.0 33 ............................ CAGGGCCTCCGCCAAGCTGTCGGGGTTCTGGCC 36041 28 100.0 33 ............................ GGACTCGATACCGCCGGTGGCCGAGGGGGACGT 35980 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 8 28 98.7 33 GTCGGCCCCGCGCCTGCGGGGGTGGTTC # Left flank : ACACAGCGGCCGTTCTCTCGTGCTTCGTGACTCGACATCTCGAAGCGTGGAGAACGGCCGCCCCTTCTGTCCCGGGAAGAACCGCAGATCAGCAGGTCGGGTGACCTGCGAGGTTAAACGTCAAGCTCAGGTCCTGTGCCCGCGCGTCGTCCCCTGC # Right flank : GCGCTACAGGGCCGCCACGGCGCGGAACCAGGCGTCGGCCCCGCGCCTTGTCAACGGCCTCTCGTTCCTACGGCACCCAGGTCGGCGAGCTGTCCGTCCCTACCCGCGCGGTAAATGCGCTGACACGGTTCCCCGGCCGCGACGGGCGCACCTTGCTCGCCAGCGCCGGAGGCGGCGGCGATGGGACGGTGCGGCTGTGGGATCCAGACAAGGGCAGACAGGTCAGTCAGTTGTTTGCGGTCCGGTGGGGCGTGGCAGCCCTTCCGGCGCGATGGTCCGAGCGATCACTTGCAGCCCCCAGCCTCCGGCATGAACGAGTGCCCGCAGGCTACTACCGGGGGCGCGCCCCGCGCTGACCTCGCAACCGGCGCCGAGCGGCTACTGGCCCGGCGCCTGCGGGCACCCGGCCAGCCACACCCCCTGCAGCAGGTTGGCGCGCTCAGTGGTGGTCTTGCGTTCGATCAGGCCGACTGCTTGCCCTGGGAGAACAGAGCTGCCTC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCGCCTGCGGGGGTGGTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGGCCCCGCACCTGCGGGGATGGTCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //