Array 1 117908-128209 **** Predicted by CRISPRDetect 2.4 *** >NZ_QPJQ01000005.1 Marinomonas foliarum strain CECT 7731 Ga0244625_105, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 117908 29 96.6 31 ............................G ACCTTTTCAGACTTGATTTCACTGACAGGAA 117968 29 96.6 31 ............................T TCCTGCTGATAACGCGCCAACACTTCATACA 118028 29 96.6 31 ............................G TATAGGTGTTGTCAGACATAAGCACATTTGA 118088 29 96.6 31 ............................G AAAACTTCAACGAAATAAGCATTAATAAGGA 118148 29 100.0 31 ............................. CTGATGGAACTTCACGTCCTCCGCTGCATTG 118208 29 96.6 33 ............................G ATATAGCTTAGGCTTAGTTAGCTTCTTATCTAG 118270 29 96.6 31 ............................T AAACCCTTATGTTTAAAGGGTTACATTGTTA 118330 29 96.6 31 ............................T TGAAATACATCCTGACATTGCTTGGCAGTTA 118390 29 96.6 31 ............................T CGCTCGTATTGGTCCCAACAAGGTAGGCACT 118450 29 96.6 31 ............................C AAGCCAAGAAGATATTCTGGGATGACCTAAA 118510 29 96.6 31 ............................T GTGGGACGACTGGAGCGCCAAGGGGTCAAAC 118570 29 96.6 31 ............................T TTGCAATACTCCTATGATTCTTCAATTGCAA 118630 29 96.6 31 ............................G AGCAGGGTAAACTAATGCGGGAAAACCCGAC 118690 29 96.6 31 ............................C ATTGCAATACATTTAAGATAAATAATTTAAC 118750 29 100.0 31 ............................. ACACAAGCGGCCAAGTTATCAGCACAATCGC 118810 29 100.0 31 ............................. GAACCTGACGCAGCAACGCCAAAGAAAATGG 118870 29 100.0 31 ............................. TGCTTTAGATTTCGTCCGCAGTGCTGACAGT 118930 29 96.6 31 ............................T AAATTCCGAGATAAAGAGGAGACCATTTCGA 118990 29 100.0 31 ............................. GATAGAACAAATGTTATGCGGTGGTTACTTG 119050 29 96.6 31 ............................T TTCGTAAATTTGGTTTCACTCATTTCTTTTC 119110 29 96.6 31 ............................T CGGCTTTTATATCCGCAAACTCGTCTATGCC 119170 29 96.6 31 ............................T TGTCGATCAAAGTATACCAGATTATACGACC 119230 29 100.0 31 ............................. TCTGGCACACCCAGACACCAGCACCAAGCTC 119290 29 96.6 31 ............................T GTCAGTCTGGCGAACTCGGCAAGACTCTTTA 119350 29 96.6 31 ............................T TCCCCATCTATCTCAATGCCAATAGACTGCA 119410 29 96.6 31 ............................C CAAAAGCACCACTACAGCCCAAAAAACCAAC 119470 29 96.6 31 ............................G CTTTCAGGCCGCAGGATATATTCGAGTACAA 119530 29 96.6 31 ............................T AAACACGTACAACTATCAAGAATATAAAGGA 119590 29 96.6 31 ............................T AGAGACGAAGACAGGAATAAGCAAGCCAGAG 119650 29 96.6 31 ............................T AAAAAAACAGCACTATAAAGCCTATTTACTC 119710 29 96.6 32 ............................C GTGCGGGGGCGCACGGTGGTTTATCTAGCAGG 119771 29 96.6 32 ............................C ATGCCGCAGGAGATCACGCGCATAACATCCAT 119832 29 100.0 31 ............................. TTAAACTTCAATGAACTAGCCTTACTTTCCT 119892 29 96.6 31 ............................G TCGTGGAGAATTTCGCTTGCGAAACACCAAG 119952 29 96.6 31 ............................G ATCGCGCGATAAAAAAAACGATCCGGTGGCT 120012 29 100.0 31 ............................. AGAGCCGAGGCTTTACGATCGTTACGCTTAG 120072 29 100.0 32 ............................. ACCACTTCGCCACTTAAAAAAGAACCGCCTGA 120133 29 100.0 31 ............................. AAGGCGTCGAAATGTACAACGCCAAAGCCAA 120193 29 100.0 31 ............................. AAGGCGTCGAAATGTACAACGCCAAAGCCAA 120253 29 100.0 31 ............................. CACACCACACAACCAACCAGTATTTAAAATT 120313 29 100.0 31 ............................. GTAGTGCGTCAACGCTTGAGCGGGATATCGT 120373 29 100.0 31 ............................. GTGAAAGGGCAAATACATTCGCCAGTCACAA 120433 29 96.6 31 ............................G TGAAATGACCATGATGTCGTTGTTAACAGGC 120493 29 96.6 31 ............................T GGTCTAAATCATCTTTTTCAGCATAAGCAAT 120553 29 100.0 31 ............................. ATTAATTGTCACATCACCGTCTTGTGGTTTT 120613 29 100.0 31 ............................. TGTACGTGGTGCGGTAACAGCCAGCGGTGAA 120673 29 100.0 31 ............................. AACTTAGTAGAACGGGTTTACATCATTACAG 120733 29 100.0 31 ............................. AGCAGGAACACCAACAGCGATGAGCAAACCG 120793 29 100.0 31 ............................. GAAATGGCGAATACTCGAAAGTAAGACAGTA 120853 29 96.6 31 ............................G CTGAGCTTGTCACCTTGCCGCTGATAATATC 120913 29 100.0 31 ............................. CTTCTTCCACGTCTTCGCGCGATACCTTTAG 120973 29 100.0 31 ............................. CCGCCCTAAAAACAATAAAAACTGTCAAATA 121033 29 96.6 31 ............................T TATCGGCGGTTCAAGATTTTTACTGATAAAT 121093 29 100.0 31 ............................. CGATGCCACGCCACATTGGCATATCATGGTT 121153 29 96.6 31 ............................T ATAGCCCTAAAGATGGCGCGAATGCAAAAAA 121213 29 100.0 31 ............................. ATAGCGGGTGTGGTAGATACGAACAATGTCA 121273 29 96.6 31 ............................G ATGACGAGAAACGTGAATTCAAATTACAAGT 121333 29 96.6 31 ............................G TGATGATTGAATGTACCCCTACCCCTTTATG 121393 29 96.6 31 ............................G TATAGCATTGCGGCCACGTCGCGGCGCTTAT 121453 29 100.0 31 ............................. CATACACCAATCAACCAGTATTTAAAATTTA 121513 29 100.0 32 ............................. ATAAACAGACACCTTTGCACCTTCCATTTCTT 121574 29 96.6 31 ............................C ATGCGTCGATGTTCTCCGCCGCGACCAAATT 121634 29 100.0 31 ............................. TAAAAGATCAACAAGCCAAGGATGATAAAGC 121694 29 100.0 31 ............................. TAGTCTGTACTGGTAACCGTGTTACCGTTTC 121754 29 96.6 31 ............................C CTTAGCCTAATAAGCCGTGAATTGTGACTTT 121814 29 100.0 31 ............................. CGTTCCCAGCGAACAAAGAGACGCTTATTAA 121874 29 96.6 31 ............................T TTTCGGGATTACGAATTCATATAAACAGGAG 121934 29 96.6 31 ............................T AGAGATACGCCCTTGATAGACGCGCACAGCT 121994 29 100.0 31 ............................. AGCATTACATGGAATAAGTACTGTTCGCGGA 122054 29 96.6 31 ............................T CCAACTTAGCCGCCAACGAACAAGCGCGCTT 122114 29 96.6 31 ............................C GCTCGCCTGGAGACGGAAGCCCCGCCGCCGG 122174 29 96.6 31 ............................G CAGAGGGCAAAGTTAAGTGATGCGATCAGTC 122234 29 96.6 31 ............................G TTTTGCATCCAATAGTCGTTGGCAAGTTTAC 122294 29 100.0 31 ............................. TCAGACCAGCCATGCCAGACATAAAGCCAAT 122354 29 100.0 31 ............................. ATTACAACACCGCTAATCATTGCGAAATCGT 122414 29 96.6 31 ............................G TATGAGTACGTTTTAAACGTCTCAAATGTCG 122474 29 96.6 31 ............................T AGTAAAAATGAGGCTTCCAGCGTTTCGGACG 122534 29 96.6 31 ............................C ATCACCAACTGATCAGCCGCCAACGAATAAA 122594 29 96.6 31 ............................T AGATAAAAAACTGACTAAACAACAACTTCAG 122654 29 100.0 31 ............................. ACCAGAAGTAGCGTTAATCGCTGAAATTTGT 122714 29 100.0 31 ............................. ACTATTAACCGTGAATGTAGCTACACCAATT 122774 29 96.6 31 ............................C AAATCCCCCTTATGCAATCTCGTCCCATCAC 122834 29 96.6 31 ............................C TACGCCGCCAGCGACTAGGACAAGCTTGTTC 122894 29 96.6 31 ............................T GAAAAAAGCGCGTAAGGTGTCATCAGACAAG 122954 29 96.6 31 ............................T AAAGAGTGTCTATAACTGCCGAAACAACAGT 123014 29 100.0 31 ............................. CCAAGCGGAATTTTTAGTAAGTGGCGATGAG 123074 29 100.0 32 ............................. CTAATGAACCGTGTCCCGCGCTGGCTTCTATT 123135 29 96.6 31 ............................C TGCCCCCTTGCTTAGCGTGTATTCGATCCCT 123195 29 96.6 32 ............................T AGAGTTCTTGAAAATGAAGACCATTTATCCTA 123256 29 96.6 31 ............................G TTGCCGCGCTTCCAGTGGTAAAAATAAGAAA 123316 29 100.0 31 ............................. AGATTCTAAAAGACATTGAAACAAAGTATTC 123376 29 96.6 31 ............................G CTGATAATATCTTCTCGATAGCGGCTTTCTT 123436 29 96.6 31 ............................T GTTTCATAGTGGCGCTTTTGTACTCGAATAT 123496 29 100.0 31 ............................. TACATAAAAACACTAAAAAACACTAAAAAAC 123556 29 96.6 31 ............................G GGTACAAACATGGATGATCGTGAACGTAAAA 123616 29 96.6 31 ............................C GTTGGGAATGAAAACGCCACAGCGCCGCCAC 123676 29 96.6 31 ............................T ATGATTGATCGCGGCATGAAAGTATCAGCAA 123736 29 96.6 31 ............................T TGGTCAGATTCAAATCATTCGCGGTGTGCCA 123796 29 96.6 31 ............................T GTTGTCATACGACGGCCGCTACAAAATCCAA 123856 29 96.6 31 ............................T TATCACAAGAATAAAGCTTTCCTCTCCTTGC 123916 29 96.6 31 ............................T CCGTTTTCCAAATGTAGCCGCGACACTTGCA 123976 29 100.0 31 ............................. TCATTGACAGCGTAGATTTTATAATCCGTCG 124036 29 100.0 32 ............................. TGCTGTTTAGCTTGGTGATTATCCCGTTGTCA 124097 29 100.0 31 ............................. GCAAGTTCAAAACTACTTAGCCGATAAAAAG 124157 29 96.6 31 ............................T GCCACGGGCTTGTCACGCATACCGCTTGGTA 124217 29 96.6 31 ............................C TCTACGGAGGGTTTTTTATTGCCTAAAATTT 124277 29 100.0 31 ............................. TAACCACCCCCTAATAAACCATCTGCAAGCC 124337 29 100.0 31 ............................. AACAGGCAAGCTAAACAAAGACGGCAAGCCG 124397 29 96.6 31 ............................T GAGTTTATCGAATTCCTGAAAGAACATAATG 124457 29 96.6 31 ............................C AAACATCGTGGCCGTGTGGGTCATGATTTGG 124517 29 96.6 31 ............................G TCGATAATGGTTCGACGCCAAGTTCCTTCTT 124577 29 96.6 31 ............................T AAAGTGGCGCGCCTACGCACAGCAGAGGAAT 124637 29 100.0 31 ............................. CCTCCTTAAAAAGTTACCGCTCACGCGATAA 124697 29 96.6 31 ............................G CTGACGATCCACGTCACCGAAACAATCTTGG 124757 29 100.0 31 ............................. GCCTTGGAATCAGTTCTCAAGCCTTTGATAA 124817 29 100.0 31 ............................. ACTATTGACCGTGAATGTAGCTACACCAATT 124877 29 100.0 31 ............................. ATCGGCTTAACGTATCACAATTTACTCGTTA 124937 29 100.0 31 ............................. TCAGGGAGATGAGCATCATCGTAAGTAAGAG 124997 29 96.6 30 ............................G GTAGCACCTGCATCACCGGTAGCACCTGCA 125056 29 96.6 31 ............................C GCAACCCGCTGGCGGCGCTGTGAGCCCGGCC 125116 29 96.6 31 ............................T CACCTTTCTGATGATCAGTTAGATGACGAGT 125176 29 96.6 31 ............................T TAGACGCTTTTAGCTTTTGCCCTGCTTTAAC 125236 29 96.6 31 ..........A.................. CCATTCTGTGGTAATCATACGAGCCATAAAA 125296 29 96.6 31 ............................G TAAAAGATATTTTAGACGGCATAGAGCGTTA 125356 29 96.6 32 ............................T ATGGGAAGAAATGGGTTGTTCATCTGTTAACT 125417 29 96.6 31 ............................G TAAGCCGTAGCACCCTGAGCGCCCTGAGTCG 125477 29 96.6 32 ............................G TCCCCTCTTGGGGCTGATATAAATTGCTTTAT 125538 29 96.6 31 ............................C TGTATCAAAAACTATGTATCAAAAAGGTGTC 125598 29 96.6 31 ............................T ATACCAGCAAGCTAGATCATCATACAGCCCA 125658 29 100.0 31 ............................. TCGAAACGGTCGGTGATCTTGTTGAGTTAAC 125718 29 96.6 31 ............................G CTTCCGGTTCGCTGATTTCCGAGGCCGAAAC 125778 29 96.6 31 ............................G TAGACATCACGATAAAACGCCCCGTCATAAC 125838 29 96.6 31 ............................G CATATTTTGCGGCTTTTCTTTATCTCTCAAA 125898 29 100.0 31 ............................. CAATGGAAAAACCGAATAGTAGTACCAGTGT 125958 29 96.6 31 ............................T AGCGGTACAGCGCCTATTACCGGTGAATGGT 126018 29 93.1 31 ..........A.................G AACAAGGACACAGTGAAGACGGTATACTAAA 126078 29 96.6 31 ............................T ATCACCCAACCACATGATTGATGCGCTACAG 126138 29 96.6 31 ............................G AGGACGACGTGATCGACATCATCCAAGTAAT 126198 29 96.6 31 ............................T TTACCGCGATTTCCCGCGAGCTATCCATGTA 126258 29 96.6 31 ............................G TATGGAAACTTTCTTCTTTTTTGTTCCTAAC 126318 29 96.6 31 ............................G GGTATTGTTGTTTCTAAAGCTGGCGCAAACA 126378 29 100.0 31 ............................. TGAAACCTGAACTAATAAGCGCGTTTCGTGA 126438 29 100.0 31 ............................. AAGGCGGTTGAATTAGCTTTTGAAACTAGAA 126498 29 96.6 32 ............................C TTAGTGCCTTCGCGTTTGCGAGCAAGCTCTGG 126559 29 96.6 31 ............................T GCCAAACTTGGGTGTTTGTCGATGTATTCTT 126619 29 100.0 31 ............................. AGAGGGTGAAGGTGTTTCAGTTGGGACGTAT 126679 29 96.6 31 ............................T AATCGTAAAGCCTTACATCAATAAGCTCTTC 126739 29 96.6 31 ............................T AAACGCCTTCGCCACCATCAAGCGCAATGGA 126799 29 93.1 31 .......A....................G ATGAAGTCAGTTAACTGAGTCGTCAATGTAT 126859 29 100.0 31 ............................. ACAACTCCTCAGGAACAGTCGCTAGGGTTGG 126919 29 96.6 31 ............................G CTAAGCTGCTTTTCTTGATTGCTATGTATTG 126979 29 100.0 31 ............................. ATAAAAACCTACGCGCAAGAGCTGGCGGAAT 127039 29 96.6 31 ............................C AGCCACACAAGAGCTTCTTGAGTTGGTTGCT 127099 29 100.0 31 ............................. GAAGAAGCGGTAACAAATTCATCGGTTCTAG 127159 29 96.6 31 ............................G TCTTCGCAATAGTGCTAAGCTTTGTTAGTTC 127219 29 96.6 31 ............................C AGGAGCAGTAGTACCGAGGGGCAAAGAAACA 127279 29 100.0 31 ............................. TCCACGCGCAAAGCTGAAATTGTCGCTTTAT 127339 29 100.0 31 ............................. GATTGGTGATTAAATCCCACCTCTAGCTTAG 127399 29 100.0 31 ............................. ACTTTTACCGCTGTAACTGGCACCCACTATT 127459 29 96.6 31 ............................C GAATAAGTAACGAGTAAATTGTGGTAAGTTA 127519 29 100.0 31 ............................. CCCAAACAGGCTGCAAGCCAGAATGGTAGTG 127579 29 100.0 31 ............................. ACACGCGCAGATTTTTCCCAGTTCACTTCTT 127639 29 96.6 31 ............................T CGAAAGCGCTGAATTTTCCGACGTGTCTGAA 127699 29 100.0 31 ............................. CATCCGAAAACTCGGCGGCGCCATTGGTCTG 127759 29 96.6 31 ............................T CTGGCGCACCATCAAAAAGCGAATAGACGAA 127819 29 100.0 31 ............................. CAAAGTTTATCTGTGAATATGGAGATCAAAT 127879 29 96.6 31 ............................T TACAGACTTCAAAAAGTGGTTCTTAAAATAC 127939 29 96.6 31 ............................G CATCCCGTCAGAGTACGCAGACGACACGATC A [127952] 128000 29 100.0 31 ............................. CATCATCAAAGCCAGCTCGTTACCAGGTGAT 128060 29 96.6 32 ............................C CGTAATTTCCTTTTGAAATACACCGGCGTTCA 128121 29 100.0 31 ............................. CAGAACCACGCAGACCCAATGGGTCACCGTT 128181 29 82.8 0 .............C...........CTTT | ========== ====== ====== ====== ============================= ================================= ================== 172 29 97.7 31 CTTCACCGCCGAATAGGCGGCTTAGAAAA # Left flank : TTTAGAAGTACTGGAAGCCTTATCTTGGCGACGTGGTTTAGGGGATTTCACTGTGGTAACTAAGGTTACTCAAGTGCCGAGTACGAACGAGTTTTGTCTTGTTAAACGAGTTCATGTGAAAAGCAATGCTGACCGACTACGTCGTCGAGCAATGAAACGTCATGATCTCTCTTATGATGAAGCTGTGGAGCGCATTCCTGACGAGGTTGAAAAACAATTGGAGTTGCCTTTTGTCAGAATCAAGAGTCGATCAACAGGGGATCAACAGTTTCCCTTGTTTATTAAACAAACCTTGGGTGAAGCTAAAAAAGACGGAGTGAGTTTTTCCAAATACGGATTAAGTTCTACCAGTACCTTACCTTGGTTTTGACCCTTTTTTTTAGACCTAATGCCAAGCCCTTATAAATAGGGGCTTGGCATTTCTTGTTTAAAAAAGGGTATTTTCGTTAAAAAGATACAAAGCTCTTTAACAATCAGATACTTAATGCTAATTTTCTCTA # Right flank : TAATGGATTCCCGCCTTCGCGGGAATGACGGGGATACGCGGGAATGACGGGGATACGCGGGAATGACGGGGATACGCGGGAATGACGAGGATACGCGGGAATGATAGTTTGTGGTTTTGTCGACTATCGGATCGCCTGTTTGGGCTCCTGCCTCCGCGGGAATGACGAGGGTTTGCGGAAATGGCGGAGCAAAGGCTTTGATTGTGGTAATGGTTAATTGTGTGAGCTTTCAAGTATGATGAAATCGAACTGATTTTTTGGACGAATATAACATTAATGACAGGATGTCATTCCCGCGAAGGCGGGAATCTATAGGGAGGTGTATATGTCTAAACAGCCTTGCGTATATATTTTAGCAAGTAAACGAAATGGTACGTTCTATGTTGGTGTAACTAGCAATTTAATACAACGTATCTGGCAGCATAAAAATAAGCAAGTTCAAGGTTTTACTGAACGGTATGGTGTTGACCAGTTGGTGTATTTTGAATTGTATGAAGACA # Questionable array : NO Score: 5.62 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.47, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACCGCCGAATAGGCGGCTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACCGCCGCATAGGCGGCTTAGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.50,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //