Array 1 53444-53812 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE351107.1 Enterococcus faecalis B83616-1 Scaffold322, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =============================== ================== 53444 37 100.0 29 ..................................... ATCTATATAAGTTAATACCGTAAAAGTAA 53510 37 100.0 29 ..................................... CTACCCCCTACATATGGTACCCCACCTCT 53576 37 89.2 31 .................................NNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 53644 37 86.5 29 NNNN................................A TGTCAAACTGATTATTATATCGACATTCG 53710 37 97.3 29 ....................................G CAACTATCTCCCAATATGCACCATAGTGG 53776 37 97.3 0 ....................................A | ========== ====== ====== ====== ===================================== =============================== ================== 6 37 95.0 30 GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACC # Left flank : CATATATCCTCATCAAGTAGTAAATGCTTCTTTTGACTTTCAAGAGGGACGAACAACAGAAGGTGGAGAAATGACACACATGATTGGCTTTGCCACTTTGCAAGAAAATATCTATGAAGATTTGGAGCAACTAAGCGTACCTGCTCATACATGGGCGGTTTTTCCAAATGAAGGTCCTTTCCCACAAACATTACAAGAAACCTGGGCAAGGATATTCTCTGAATGGTTGCCTTCATCTGGTTACCAAGTCGTTGCAGCACCAGAAATTTCGTTTACGCAATATCAAGGACCAGCAGAAGCTAAGTACAGTGAAATCTGGCTCGCTGTTACAGCTACTAAATAAAGAAAACCCACCATTGAAAAATGGTGGGTTTTTCCGCCAAGAAGGAGAAAGTTTGGTATAATAAACGTGAAGAAAAAAATCAGACCTTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGAATACGGAATCATGGAGAAAAAATAATTCTCCGAG # Right flank : ATTTTTAGGAGTAAACACCACCGGACATAAGTTTTAGAGTCATGTTGTTTAGAATGGTACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGAGTCATGTTGTTTAGAATGGTACCAAAACTTGGTTCGTTTGATATTCGCGGTCGCATCGGTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACAGGGTTACGATTGGGAAGATGAAAAAGTTTGTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACAGATGTTACAACAGAAACAACGCCTGACTAGTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACCTAAAGTGGGGACT # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 2 54064-54298 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE351107.1 Enterococcus faecalis B83616-1 Scaffold322, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================= ================== 54064 37 89.2 29 NNN.................................T TGGTTCGTTTGATATTCGCGGTCGCATCG 54130 37 100.0 29 ..................................... GGGTTACGATTGGGAAGATGAAAAAGTTT 54196 37 100.0 29 ..................................... GATGTTACAACAGAAACAACGCCTGACTA 54262 37 97.3 0 ....................................C | ========== ====== ====== ====== ===================================== ============================= ================== 4 37 96.6 29 GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACA # Left flank : TACCCCACCTCTGTTTTAGAGTCATGTTGTTTAGAATGGTACCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGAGTCATGTTGTTTAGAATGGTACCAAAACATGTCAAACTGATTATTATATCGACATTCGGTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACGCAACTATCTCCCAATATGCACCATAGTGGGTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACATTTTTAGGAGTAAACACCACCGGACATAAGTTTTAGAGTCATGTTGTTTAGAATGGTACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : CTAAAGTGGGGACTGCGGGAACCGGTGGATGTTTTAGAGTCATGTTGTTAAAAAGCAAACTATCACTACAAGCAATCCGTAATTTTCATCACAAGATTAGAATTTTTATCATCAAAGACGAGCTGCTTCAATTTTCGGAAACTAATCAAGTGATAAGTCAAAATGTTGATAGATTGAGATTAGTTCTTCCTTTTTTTAGGAAGGGCTTTTTTTATTGATAGAAGAAAGGGAAGAAATCTTGGGAGCACCTAAAAAAATTGTGAGAAATGCTTCTGTATTGTTTGGTTTCTGCCTCAGAAAGTTGTATACTTAGATTGGAATTATTCTATATTACATGCATTTTCACACTTTTTGGAAAAGTTCACTTGAATTTTCTTTTAGTTTCGTAGATAAAAAGAGTCATCGCTAATGGAAATGAACAATTCAGGTAAGCTTGTTTCTTTGTGTGGAAGCAAATCAGGGAGGAAATAATATGTTTGATATTGTAACATTGGCGAGAA # Questionable array : NO Score: 5.69 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [0.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //