Array 1 9344-10105 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LCUP01000045.1 Legionella pneumophila strain PtVF66/2014 Contig_45, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	=====================================	=====================================	==================
      9344	    37	 100.0	    36	.....................................	TCTTGAACAATTGCCACTTGAAAACCATCATCTACA 	
      9417	    37	 100.0	    34	.....................................	ATCCATGTGTCTTGCATCCTTGTAATACCAGCCG   	
      9488	    37	 100.0	    34	.....................................	GTAATGCAATTGACACATTGCCCGCATTCTTGAA   	
      9559	    37	 100.0	    36	.....................................	TTTCTCAGCAAAAAAGGCTTGTCTGTTTATCCTTAA 	
      9632	    37	 100.0	    36	.....................................	ACATCCCCCTTTTCCACTACTTCAAAAGATCTCAAC 	
      9705	    37	 100.0	    37	.....................................	GACAAGAAAGGCTCCTCTACTAAAACCCACAAAGTAT	
      9779	    37	 100.0	    36	.....................................	ATCCTAACCCACTCAACGGGATTAACTTTCTTTGAA 	
      9852	    37	 100.0	    37	.....................................	ACTTCCATTTCATCATCAAAATCTCGAATGCTAAAAG	
      9926	    37	 100.0	    34	.....................................	TGTATGTGAAAAGCGTTTTAAAAGCTTAAAGAAA   	
      9997	    37	 100.0	    35	.....................................	GTCGCATCGTTTTCATGGTCGTAGCCTGACTTCTT  	
     10069	    37	  81.1	     0	....A......C...........TT...T.A.....T	|                                    	
==========	======	======	======	=====================================	=====================================	==================
        11	    37	  98.3	    36	CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC	                                     	       

# Left flank :   TCTTTTGCATCAAAAATTAGTTTAGGTCAAAAGATGCAACTGACCGCATATGGAATGCTTTCTGAATTGATTTTTGAAAAATCATGTACCCGAGGCTATATTATTACTGGTGAAAAAGCCAAAGCCAAATTAATAAAAATTGACGAAAAATCAAAGTTCAAAGTGCTTGAAATTTATGCTAAAATAAAGAAGATTTTTGACACAGAAACATTACCATACAGCACTGCTAATGGACTTCAATGCATTCAGTGTGAGTTTCTAAATCACTGTAACGATAGATTTTAAAATCGTTATATGCTCGCTATTAATACGAGCATAGAAAAACGATTCAATCTTTAATTTTGTTGATTTCAGGGTATCGAAATTTAGATGATTTCTAATTCAAGTATTGCCTTTTTTTTCGAAAAATCAAGTCTAAATAATGCAATTTGCTATTTTTCGAAGAAAACCACTTTTAATTCCTCGTGTTTCTTTAAAATAAACAAAGAGTTAAAATTGCT
# Right flank :  TACTCCATACTTTATTCTCTGTATACTATTATAGTAAAACTCCATGGAGTTATTATTTTATATAATTAAACATGTCGTAACTCCATGAATGTGACACTTTCATGGAGTTACGACAGCCGTTATGTTTGCTTGTTTTTCATCTTATTTGCTTAATAATTAACTTGATAATTATTAAGTGCTTTTATTTTACTCTGTTGCTTTTTCTGACAATACCTGTCTTTACAGATTATCTTTGTAACAAATTTTCTTAATTTAATTTTCAAAACCATGCCCAACACTGGATTGTCTTTTGTTTTGTACATCTCAACTGAATATAATACTAGTGAATTTATTTTATTAGATAATTATTTCAGTAAGTTCTAATATTCAGGACTAATTTCCCAAGAATATTAACCTCAGCAATATCACTCACTTTAATATCTGGCCAATTATCATTAAGCGTTAAAAGCTCGAATTGTGAGGATGTATAGGACAATTTTTTATATACACAGATAATTGCC

# Questionable array : NO	 Score: 6.17
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:62.16%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,-0.30] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-7] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [73.3-75.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.41,0   Confidence: MEDIUM] 

# Array family : NA
//