Array 1 267066-270752 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZLO01000003.1 Neglecta sp. Marseille-P3890, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 267066 32 100.0 34 ................................ GTTTAAAATGCTATTGACCGACTGCACAAAGTAC 267132 32 100.0 34 ................................ GGGGCTTGACCCATAGGCATTTTTACCCAAATTG 267198 32 100.0 33 ................................ AATCAGGCTGTAAAAAATCTCTGCCTCTTGGAT 267263 32 100.0 34 ................................ CGGCAATCCAGCCACGGACGTAAGTACCGACAAC 267329 32 100.0 34 ................................ CCTTGAAATGCTTAAAAGCGGAATCCTCCATAAC 267395 32 100.0 34 ................................ ATCTCTTGGGAAGAGTTTGAGTCAAAGAAAAAAC 267461 32 100.0 36 ................................ CATGACTGCCTTGCTTTGCTCAAGCTTGTAAGTACG 267529 32 100.0 33 ................................ ATCGATAGAAAGGACAGCTTGAACGGTTTATAT 267594 32 100.0 34 ................................ CTCCGTTTCTGTGACTTCCGGCAGCCCTGCAACG 267660 32 100.0 35 ................................ TCAATCTTTCCGCTGCCAACCCCAGCGTTGGATGC 267727 32 100.0 36 ................................ CAGTAAGGCCATTTGCTCCTTTTTGGAATCCAGCTG 267795 32 100.0 35 ................................ TCCAAGATTACCTATGAGATAAAAGCAAAAAAACA 267862 32 100.0 35 ................................ ACAAAAGTGAAATATAACGTCGCCAATGACGACAT 267929 32 100.0 37 ................................ ACCTCGACCAGTTTTACCTACGACGGAGGTTAGCGTA 267998 32 100.0 34 ................................ TTCTGGTATGGCATCAGTAATATTATGTATTTTA 268064 32 100.0 34 ................................ TGCTAAATCACAAAAATCATAAGCTTCTTCGCTG 268130 32 100.0 35 ................................ ATAAGTAAAATCCCTATGAAAACTTTTTATAGGAG 268197 32 100.0 33 ................................ ACCAGATTGTCAACACGATATAACCCATAAGCA 268262 32 100.0 33 ................................ AAGCTTATCTGCATCAAACTTAACAGATGTACT 268327 32 100.0 36 ................................ TTGCACCAGACGGCTGGATAATCATAAGATTAATTG 268395 32 100.0 34 ................................ CCGGCAGCGTTAAAATCAGTATCATCATCCTTAA 268461 32 100.0 35 ................................ TGACGATGAGATTTATAACTTGCTTGGAAAGTTTA 268528 32 100.0 34 ................................ AGCATTCTCGCCACCATATCGCCATCCATCGTAA 268594 32 100.0 34 ................................ CATTTGGTAATATCCGCAGTGTTATAGTTAGCAT 268660 32 100.0 34 ................................ TCCTGTGTCCATGTTTATTTTAGTTTTACCGCTA 268726 32 100.0 35 ................................ TCCCATAGCCGCCTGCGCTATTTTTTTTGTTGCAT 268793 32 100.0 37 ................................ AAAAAACGCTGAATATTATATGTGGAACGTTGAGCCT 268862 32 100.0 35 ................................ AACTGCTCAAAACAAAGTGTTAAATAGCCAAATTG 268929 32 100.0 33 ................................ AGATTATTGTGTATTCCGTGGAGAAGTAGGTAT 268994 32 100.0 34 ................................ CCCCATTTTATGTAATGAGTACAAGTCAATTTAT 269060 32 100.0 35 ................................ CAACGTGTCCGCCCTCGGAAGTGTTAGGTTCTAAA 269127 32 100.0 34 ................................ CCCCATTTTATGTAATGAGTACAAGTCAATTTAT 269193 32 100.0 35 ................................ CAACGTGTCCGCCCTCGGAAGTGTTAGGTTCTAAA 269260 32 100.0 34 ................................ GCAATCTTCCATGTAGTCGTAATTGTCAGATTCC 269326 32 100.0 33 ................................ TGTGCCGGAATTCTCGCTCTCATAAATCCTCCA 269391 32 100.0 36 ................................ CTGCTCTAAATAGATATATAGAATCTATTATGAGTT 269459 32 100.0 35 ................................ CACTGTCAAAACCAATAACGAACCGTTTTGCAATC 269526 32 100.0 34 ................................ TTTTATTGTGGAAGATTCTTTAAACCATGAAATT 269592 32 100.0 33 ................................ TACCCTAATTTACAACACTAATCTTAGACAACC 269657 32 100.0 34 ................................ ATCAATTGCTGTCATGTAACCCTGATTTAATCTA 269723 32 100.0 36 ................................ ATGGTATTACGAACATCCTGCCGTAACTATTCAACC 269791 32 100.0 36 ................................ ATTCGAATTGACCGTAACCAACTAAATTTATGTTGG 269859 32 100.0 35 ................................ CGTCACCATTTGAAACTGATAATACATTAAAAGGG 269926 32 100.0 33 ................................ ATTGAGGTGTTAACATGGAACTAGGAAACGGTG 269991 32 100.0 34 ................................ ATCATAAGATTGTTTAGATTGTCCAATTCTCTTG 270057 32 100.0 35 ................................ AAGCGAATCGGGATCAGACAGCATTTGAACAAACA 270124 32 100.0 34 ................................ ATCATAAGATTGTTTAGATTGTCCAATTCTCTTG 270190 32 100.0 36 ................................ AGAAATCGAAGTTGTTAAATGGATTGTATACGAAGA 270258 32 100.0 34 ................................ AACGAGAGGTTAATAACCAAACAGAAAAAGAGAG 270324 32 100.0 35 ................................ TTTTTATCATATCAAATAAAATCAGAAAGGTGAAA 270391 32 100.0 34 ................................ ATAAATTGTTTACAACCAGTTAACAACTTAATCA 270457 32 100.0 34 ................................ CCCACCACCACGAGCAACAGAAGTATGAATAGAA 270523 32 100.0 35 ................................ GGATTCTGTCCATTTAATCATGTTATCCGCTTTCA 270590 32 100.0 34 ................................ TTCCAGCTCTCTGATGATGTGCAAATATGTATTT 270656 32 100.0 33 ................................ ACGCTCAACAAAACATTGCTTCAAGCTCATTGC 270721 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 56 32 100.0 34 GTCGCTCCCCACACGGGAGCGTGGATTGAAAT # Left flank : GATATTATTGCTCACAAACATTGGAAAAAATATGCTGTGCAATGCAAATACTATTCTCGTACCGTTGGCAACGCTGCCATTCAAGAAGCGGTTGCCGGAAAAGCCTACTACGGATGTAATGCAGCCATGGTAATTACTAATTCTACTTTTACTCGCCCTGCCAAAGAATTAGCGCATGTAAATGACGTTCAATTAATTGAAAATGTATTCCCTCATCGCTTCTCCTTCAAAAAAGATGAGCTGTTAGAAGAGGAAATCCTACCGCTCTAGTCACTTTATTTCTCCGCCTATTCCCATTTTCGTTACTCTTATTATCAGATTCTATTTATAGTGCGAAGTTCTATCAACCATGAAAACCGTTTACTTTCGCACTATAAATAGAACCTATTTTTTCTTAACCACATAGTAATTTAAGATTTATTAACTCTTTTAAAAACTAGTAATTCTATATTTTGTGAAATCTGTGCAAATAAGCACTCCTTATTTCATAGCATTTTGCT # Right flank : TTTCTCCGGCTATTTCTACTGAAGATTGGTCAAGAGTCGCTCCCTGCACGGGAGCACAAAAAGGAGAACGACTTGTGGGCTAAAGACACCACAAGTTGTTCTCCTTTTTAAGGATAATTGCCTTACATAAATAAATTTCTATTAAACCTATTCTTTACTTCTTAACATACTGCTTGCTATCCAATTTATATCTTTTCGATTATTCTGCTTGTGCCTGATGAAGTTTGGCGTAAATACCATTTTGATTCATCAGTTCTTCATGCGTACCAAGCTCAGCAATATTAGTGCCGTCAAGCACAACAATTTGATCAGCGTGGCGAATTGTCGATAGGCGATGTGCAATTACAACGGTAGTACGCTCCTTGGAAATTTCATCCAGTGCTGCCTGAATTTCTTTTTCTGTTTTGGTATCAAGTGCGGAAGTCGCTTCATCTAGAATGAGAATAGGTGCATTACGTAAAATAGCTCTGGCAATAGAAATACGTTGTTTTTGTCCTCCG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCACACGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.10,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 197705-191419 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZLO01000002.1 Neglecta sp. Marseille-P3890, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 197704 32 100.0 35 ................................ GTCGAAGAGGGGCAAGAACTCACACCCCAGCAAGT 197637 32 100.0 36 ................................ GGTAACACCTTCTTGCGCCACCAAATAATCGGCAAT 197569 32 100.0 35 ................................ TTTGTCCTATCGGATTTATTGTGATGCAACAAGAA 197502 32 100.0 35 ................................ TTTTTCTTGATATTTTATTATTGCTTCAGATACTT 197435 32 100.0 36 ................................ TTTGCCCAAGCTGTTTTCTTCAAGCCTAGAAAAATC 197367 32 100.0 35 ................................ CCCTCTAAAATATATTTCATGGCATTGCTAATTTG 197300 32 100.0 34 ................................ CCAGTAGGCAGCATCATCAATACGCTGTTTTGCA 197234 32 100.0 35 ................................ TTTTAGGCCTAAATCGCATATTCTGTGCTGTATCG 197167 32 100.0 33 ................................ GCAACAGCAATGTCACCAAGGTAAGACCGCTGC 197102 32 100.0 34 ................................ CACAGGAGTTTTGTATCGGCGTGACAATAACCGC 197036 32 100.0 36 ................................ TTTTGGCTGCAACAGGGTCATTGAGAAGAAGTGAAA 196968 32 100.0 33 ................................ TTTTGATTGAGAGCTTATTAGCTCCGGCATTGT 196903 32 100.0 35 ................................ AGTGTCAATATCACCTGTAACCACTTGTACAGTAG 196836 32 100.0 34 ................................ ACAAAATGGCAAAACGGAGAAGCTACACAAAAGC 196770 32 100.0 34 ................................ TACGGTACCGCTCCGCACACTCCGGGCAATAATT 196704 32 100.0 35 ................................ GCATATCCACAGGTTGTTGCGATATGCTTAAATTT 196637 32 100.0 35 ................................ ATGTGCGCACCTCCTCAAACTCGGATATGTAAATC 196570 32 100.0 35 ................................ ACCCTCGGCGGTTGTGTGGTGTGTGAATGATGTAA 196503 32 100.0 36 ................................ CTGTAAATTATCAACTGGCAGGTTGACAATTTACAT 196435 32 100.0 34 ................................ TGTATCAGCTATCACATACTCCAAAGTGTGGATT 196369 32 100.0 34 ................................ GCTGGTAGCGACATCTAATTGTGATTGCAAAGAT 196303 32 100.0 35 ................................ ATCGATGTCATAATAATCGTCATTAAAAACTAATC 196236 32 100.0 35 ................................ TTGTTTTCATTTTGCTTTTGCGTTGTGATTGCACG 196169 32 100.0 35 ................................ CCTTCCGCTTTTTAAATATTTTTGAAGAGTATCTA 196102 32 100.0 37 ................................ ATCTTTTGTGCCTGTATAACCTATAAAGTTATAAACC 196033 32 100.0 34 ................................ ACTCGGGCAGAGGTCATCACGCCCAGCTCATGTA 195967 32 100.0 33 ................................ GGATTCCATTTCAACTCTGCACTGTCATTCGGT 195902 32 100.0 35 ................................ ATCAGGCGTGACAAAAGCCTTGCCCTGTGGGACAG 195835 32 100.0 35 ................................ CTCCATCTCCTGTCATAGGCTCTCCACAGTGCCCA 195768 32 100.0 33 ................................ ATTTGTAACGAACGCTGGCGGTGTATCGAAGAT 195703 32 100.0 33 ................................ AAGGCAGTGCTGCTATGATGAAATCAGCATGGG 195638 32 100.0 33 ................................ GTATTTGTCTAGTTTCGAAACGTCAGCGGTGCG 195573 32 100.0 35 ................................ GTCAGCAAGGCTTCTGCCGTGCCGTCCCCGAAAAC 195506 32 100.0 33 ................................ TCAACTCAAGCAAAATAGGGTTGGCAATGGTAA 195441 32 100.0 34 ................................ AAACTATCCAAAGAATCACACTGGAGCAAGGCAA 195375 32 100.0 35 ................................ AGTTAGAAACTGCAATTGTTATGGATGACAACTAT 195308 32 100.0 35 ................................ TGTCAGTAACAGCAGCAACAATTTTATCAGCTCTA 195241 32 100.0 37 ................................ GTCGGGTACTGGAAATCAGGCAGGATTTAGGCAAGAC 195172 32 100.0 35 ................................ CGTTAAATGGGTATCTATTTTTTCGGCTGATACGC 195105 32 100.0 35 ................................ AAAAAAGACATCAGTGTGTCGCTGGTGTCCTCAAG 195038 32 100.0 36 ................................ GGCGATTGAAGCCCGTGTTATTGCTTGGCTTGCCGG 194970 32 100.0 35 ................................ GGTTCCCAAAAATCCTGCCAACAACAGGGCTCTGA 194903 32 100.0 34 ................................ TAAATGACATAAAAGTAATGTTTTCTCTGCCAAG 194837 32 100.0 35 ................................ CGGCCGTAAAAGGCGACAACGGCACGCCTGACAAA 194770 32 100.0 33 ................................ AGTACCAATTTTTTTCTGACGTGTTTCTCTCGG 194705 32 100.0 34 ................................ AGTTTTACCGCTAACAGATTTTAAAACACCCGCT 194639 32 100.0 34 ................................ TTGCTGGCTTTAAAAGCAAACCTAGCCACTAGCA 194573 32 100.0 35 ................................ ATCCTCCTGCAATGGATTTAGAGTTAGAAAGGCTG 194506 32 100.0 36 ................................ GAGTAAGCTCTAGTTTTGCTCCTGCGTAAATTTCGG 194438 32 100.0 34 ................................ ATTTGAAGACGCCGCCGTTGAATCCATCTCTTGG 194372 32 100.0 35 ................................ AAATCTTTGAATCTAAAGCAACCACGCTCAAAATA 194305 32 100.0 34 ................................ AAAGACATGCTATGAAAATATGTTTGCATTATGT 194239 32 100.0 35 ................................ TACCTTTTGTTGTTTTATCGTAATTTCTATCTGAA 194172 32 100.0 34 ................................ TGACATTTTGCATCGACCCATTAACCGATATGTT 194106 32 100.0 33 ................................ TTTTTGGCTTGCTAAAGCGATACAAGAAGTAGG 194041 32 100.0 34 ................................ ATTATTAATTTGCACACCAATAGGAACATTTTGT 193975 32 100.0 34 ................................ CCGGAAGACTAATAAAAACACATATTGAGGGTGG 193909 32 100.0 33 ................................ ATCTGCTCTGCATACGTCAAAGCAGAATCAAAA 193844 32 100.0 34 ................................ ATACCAAACTAAATACGCTTGGTTGTTTTGAAAA 193778 32 100.0 34 ................................ GCTTTGAAACTCGTCAAGCATAATTCTTTGTGTG 193712 32 100.0 35 ................................ ATTGCCTTTAGGAGGCTTCTTACTTGGTTTAGGCT 193645 32 100.0 34 ................................ TGTGAAACTGAAGAAGCAAGAATCGGAATTAAAA 193579 32 100.0 35 ................................ ATTTATTACTTGAAAAGGAGATTAAGGTAATGGCA 193512 32 100.0 35 ................................ ATAAGGAAACCCGTTGTAATCAATAGGTGATAAAC 193445 32 100.0 35 ................................ AATTTGTGCCTTAATATCAGCAATTTCTCCACCCG 193378 32 100.0 35 ................................ ATTCTAGGCCTTTGGAAAACGGCTGACGGCTTGAT 193311 32 100.0 35 ................................ AAAGAATTGCCCTCCTCGCTGTCTGTCATAGGAGC 193244 32 100.0 34 ................................ TTAGACGGTGCTGCAGCTACCCAAGGGCGATTTT 193178 32 100.0 35 ................................ TTATGTCATTTTCACAAAGGCTGTCTGAATTAATG 193111 32 100.0 34 ................................ ATTGAAGAAGAACTTACAGTAAATACGCTAATTG 193045 32 100.0 33 ................................ AGGAAAATTATCTTCTATTAATACACTGTATAA 192980 32 100.0 35 ................................ AGCTGTGTTCCTCCATGCCACCACATCAATAAAAT 192913 32 100.0 36 ................................ TGTTGCCTGAATAGGTGGGAACTGGCTCGCTGTAAG 192845 32 100.0 34 ................................ CTGTTTGGTGTAGTTTCATAAGGAAAACCATTGT 192779 32 100.0 33 ................................ ATTTGTAATAGGTATTCCTATAGGCACATTTTG 192714 32 100.0 34 ................................ ACCTACAATCCGCAAACATGGCGGATATTTAACC 192648 32 100.0 34 ................................ AATAAGACAATATCAACTGTAAGTAGCTTTAGTG 192582 32 100.0 35 ................................ CTCCTTTATCGTCTGTAAGGGTTGTACCCCTCGCC 192515 32 100.0 35 ................................ GTTAATACTGGTATGGCCGTCTGCGTGGGTAACTG 192448 32 100.0 34 ................................ CAAAAACTTTCTGCGTGCGTTGCTTGGCCAACTT 192382 32 100.0 35 ................................ TAAGCCCTGTGTAGCACATAAAGAAGATGTAATCG 192315 32 100.0 34 ................................ AATATGGATTCCTGCTGTTTCAATCGAACCGAAG 192249 32 100.0 35 ................................ GATGATGTTATCACCGACACAAAGGAGAAATAAAC 192182 32 100.0 34 ................................ TGAAATTGACTCAATCAAACAAATCACAAACAAC 192116 32 100.0 35 ................................ CCCCTTTAAATAACTATTATCTTACAAAAGTAAGA 192049 32 100.0 34 ................................ AATCGAACCGAAGCAGCGTTGAAATCTTCCCAAA 191983 32 100.0 34 ................................ AACGCAACAGACTTAATAATTACTATGTTTATAA 191917 32 100.0 33 ................................ ACAATGGAATCATCCCAATCATAGGCGATTTTA 191852 32 100.0 33 ................................ TGACTACTCATGGAAAATGTCGTCAAAATGTGC 191787 32 100.0 33 ................................ ATAGAAAAGGTGTTTTTTACAACGGAAGTACAG 191722 32 100.0 35 ................................ GCTAAAAACAAAAGACGGCGCTTACAGTGCGTTGC 191655 32 96.9 35 ............G................... TCGAACGTCCTGCAACGTGCCGACCTAACAATCAT 191588 32 96.9 37 ............G................... ATTTTGCGCATTAAACCAAAACGCTGTAACACGCAAT 191519 32 93.8 36 ............G..................C AATAATGCGCAGATACCAAAAAATTATCTGTACGCC 191451 32 90.6 0 ............G......C..........T. | A [191424] ========== ====== ====== ====== ================================ ===================================== ================== 95 32 99.8 35 GTCACTCCCCACACGGGAGTGTGGATTGAAAT # Left flank : TAGATGGATATCCTCCTTTTTTGTGGAAGTAGGTGGTTGAAATGCTGGTACTTATTTCTTATGATGTCAATACAGTAGATTCAGCAGGACGACGAAGGCTGCGCCTAATTGCAAAGCAATGTGTCAATTATGGCCAGCGCGTGCAAAATAGTGTTTTTGAGTGTCTGTTAGATGCAGCACAGGCCAAAATGCTTCAACATAAACTTTGCAGTATCATCGACCAAGAAAAGGACAGCCTACGTTTTTATTATCTAGGAAAAAATTACAAAACGAAGGTTGAACATTTTGGTGCAAAGACAAGTTACGAACCAGAAGGTGTATTAATGGTTTAGTGCGAAGGATAAGCAAACATAAATTACAAGAGGGCTCGCACCAATTTTTGATTGATTCTAAATGGATATTAATCTTTAAAAAGAAAGTTTACACCTGAACAAGCAAAAAATTAAAAATATATGACAAACAAATTAAATTTTTACAAGCAAAAATTATAACTTTTTGCT # Right flank : GACAATAATAAAAGACATTCTTACTCTTTCGTATACACCAGTGAAAGAAAATAAAAATGTCTTTTGCGGATTAATAATAAGGAAAACACCATAAGTAGCGAAAATAAATTTCTTATTTTAGTGTTTTAGAGAATCAAAGAAGGCTTTGTTATGCAAATAAGATTGGCTTTCTGGTTTTAACTTGCCAGCTTGCTCATTATGGTAAATGGATTTTTCGATGTTGTTTAGTCGGTAGTAGCAGACACATAGTTGCAGATGGGGTTGAAAATCATAGCAGTCTGGCAGAATAAAAGCGCCAGATTGATCATTTCGTTCGCAAGATAAGGCTGTTTCATACCAAAATACAGCAGTATCATATTTTTTTTCTTCTATGAAGTATGAACCTAGGTCGCAACAAATTTCGGCACGGGGACGATCGAATTCAAAACTGTTCAAGAGAGAATAAAGAGCCTTTTTGCGGTTATTTAATTTAAGATAGCTGATATAAAGGCTACGGCAAG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCCACACGGGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.30,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [73.3-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : NA //