Array 1 81194-80830 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_PQVC01000006.1 Neisseria sicca strain C2006001571 NODE_6_length_99001_cov_37.318011, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	=================================	===================================	==================
     81193	    33	  97.0	    34	T................................	CCTGACGGGATTAGTTGGGAAAACTTACCCCAGA 	
     81126	    33	 100.0	    33	.................................	ATGACGGTGTGATTATGGCCGCCCCTGCGCAAT  	
     81060	    33	  97.0	    35	G................................	AATCAAGCACAAAACAACACACTTTTACGAACTGA	
     80992	    33	 100.0	    32	.................................	GGATTGATTAAAAGTGCTACACGGAAAACCGC   	
     80927	    33	  90.9	    32	.........T......T..T.............	AGACGACCTCTACCGTACTGGCGATTGATTTT   	
     80862	    33	  87.9	     0	G.T...............A...C..........	|                                  	
==========	======	======	======	=================================	===================================	==================
         6	    33	  95.5	    33	CCCAGCCGCCTTCAGGCGGCTGTGTGTTGAAAC	                                   	       

# Left flank :   TGCACATGGGAATACAAAATGCTGATGCTGATTACTTACGATATTTCGCTGGAAGACGCGGAAGGACAAGCAAGGCTGCGGCGCGTGGCGAAATTGTGTCTGGACTACGGCGTGCGCGTGCAGTATTCGGTGTTCGAATGCGACATCGCGCCCGATCAGTGGGTTGTTTTAAAAGATAGACTTTTGAAAACCTACAACCCCGAAACCGACAGCCTGCGCTTTTACCATCTGGGCAGCAAATGGCGGCGCAAAGTGGAACACCACGGCGCAAAACCGTCAGTGGATGTGTTTAAGGATACGCTGATTGTGTGAATCGCCAACCTACAGTTCTCATGAAAATGCTGCAAGGTTGGCGAACTGGGATTGTTCTTTAACAATCAGGATATTGTGAATGCGGGTGTAACGGAAAAGGCTGTGTTATACTCGTGTTCGCGCTTTTCTTGGGAGCTTAGCGAAATCAGGGCTGCGAAACCTGATGGGGCAAGGCTTTTGAGAGAGGC
# Right flank :  CTGTAGCCGAGGGAGCAGATGTAGAGGTGCAGGCCCAGCCATCTTCAGTTAACCATATGTCGACCAGATGGTGCTTTCCTGATTTAACCCGCCTGTAACCATCTGCTTTTTGATGGTTATGTCTGAAAAATCATCTGTGGAATAGGAAATCGTTAATCCATCAAATCTCTGTCTTTCAGACGATTGAAATCGGATTTGTTCTATTCTGATTAAATCGGATTTTTCCAGCTTCGGGCTGCCGGATAAATTTGATGCAATGCAGGGTCTGATTGGCAAGGGGCTGGATAAAAATGGCAGCTTTGTTATAATGAAACTACTGGCAGTTACATACTTTTCTTGGCATTGCGCCGTTTTATTCATATTAACGAAAGAGGAAAACAAAATGTTTCCAGAATATCGCGATTTAATTTCCAAATTAAAACAAGAAGACGCCCACTTCGCCCGTCTGTTTGACGAGCATAATGAGTTGGACGATAAGATTACAGGTTTGGTTAATAATC

# Questionable array : NO	 Score: 5.73
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CCCAGCCGCCTTCAGGCGGCTGTGTGTTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [7,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GCCAGCCGCCTTCAGGCGGCTGTGTGTTGAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-5.20,-5.90] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [6-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [46.7-45.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,5.28   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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