Array 1 98133-98944 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAAHR010000002.1 Nonomuraea sp. K271 K271_contig_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 98133 29 100.0 39 ............................. GTGGTCCCGGTGGCCGAGGTGGACGCCGCTGTGGCGCAG 98201 29 100.0 35 ............................. GGGGCTTCTCCAGAGGGATTGAGGGGAGGCCCGCG 98265 29 100.0 37 ............................. AGCGCGCGCACCGGCCGGCCCGCACGCGACGACCCGA 98331 29 100.0 35 ............................. CCGTAGTTCCATACGGACGAACCACAAGGGGCCGC 98395 29 100.0 34 ............................. GGTGGATAGCCCAGCTCGCCACCGTGATCGTGGG 98458 29 100.0 39 ............................. ACGCCCATCAGCTCGTGAACGTCTGCAACGTCCGTGATG 98526 29 100.0 33 ............................. TTCTACGACCACCCGAAAGTCTTCGACGCCCCT 98588 29 100.0 35 ............................. CGGTCCCACACGGGCCGCAGGTAATACCCGCCCAA 98652 29 96.6 38 ..................A.......... TCGTCGCCGGCTTCGACGAGGATCCCGGCCAGGACCGG 98719 29 96.6 35 ..A.......................... ACCTTTTCACCACGTGGATCGGCCACCCCATCGGC 98783 29 100.0 37 ............................. GCCGCCGTGGAGGGCGTGGGTTTTGCAGCTGCGGCAG 98849 29 100.0 38 ............................. CTACGGAACGAAACCTTACGACGCAAGACGATACATGC 98916 29 96.6 0 .....................G....... | ========== ====== ====== ====== ============================= ======================================= ================== 13 29 99.2 36 GGCACTCATCACCCTGGAGGGATCGCAAC # Left flank : CCGCCGGACTGCTGACGAACCTGCTGCCGAGCGAGCCGATACATCGGAGACGAAGGGACCGGTTGACGCCGACGACCACCATGCCTCGGGATCGGAGGTTCCTGATCGTTGCGGAACGGGCGACCTACGTCGAATGGCCTGGCAGTGGGCGTTGGAGCACCGCTTGCCCGATGGGGCTCTGCCATCGGGGAGGGCCATCGCTGAGCAATTCGCGCGGAGCGCTCGATGGGGCCGCTGGATCAAGCGGGTAGGCCTCGAGGGAAAGCTAGCAAAGTACGATCACTCCACTGCCGCATCACCCAGTGAGCCACCAAGTAGTGCGGCTCTTGCGATCAGCACGGCGGCGGCCACAGCGCAGGAAGAAGAGCGTCGTGCGCTTCCTCGTGATTAGGGAATCGATCAACGCCCTGACCTGCGCTTCTGCATTACCGGCGGACTGCTGCAAAATAGTGTTATCTGTAGTGGATGCTAGGGCTTCTGACCTGGGGCTTTACCGTGGG # Right flank : CGTGCATCTGAGCCTCTCTGCGACAGGGCTGATACCGGGGCACCCAACACCTTGAAGGCTCGCCCCGTCGACGAGATCCGCGCCTACGGCTTGGGCGTCCGGTGCCACTCATCGTCAAAAAACCGGAATCCACCGTGACCGCTACCCAGACATGCCCGGGCGTTGGGCGGCCCGCAGCAAAGGTATTGGAGCCAGGCGGTTCCATACGCGGCCAGCTGCTTGATCGGACTAAGTCTGGCATCGGGGATAGGTGTTCGCGTCGCGAACAGAATAGTGCGGTCCAGCGCTTCGAGAAAGTCTTGAGATTCCACAACTCGTCAACATCGCCGGTGCTAGAGTCTCGCTCCGACTCGAAGAAGGGGGGGTGATATGGACAGTCAATATGTCCAATTTATGGCTTTGGATCCGACTCTGTGGTTATGGGCCGCGATTGTTATCGCTATTTCGGTATATCTGCGGCGGCGGTCGTTCCACGGTGAGATCAACGTGGAAGTTCGTAT # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCACTCATCACCCTGGAGGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.10,-3.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 2 107869-110760 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAAHR010000002.1 Nonomuraea sp. K271 K271_contig_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 107869 30 100.0 37 .............................. TGACCGGATTCGCCGAGTGAGCGGAACCAGCTCTGTG 107936 30 100.0 34 .............................. CCCAACGGTGTCTCCAGTCGGCCAACACCTCCAG 108000 30 100.0 32 .............................. CCGCGATCAGCCGAGGGGTGCCCCATTTTCAG 108062 30 100.0 38 .............................. CCCGGGTACACGTAGACCGGCAGGTCGGCAGCAGCAAG 108130 30 100.0 37 .............................. TGCCGCAGGACGTGGCCGACGAGTACCGCGCCGCGCA 108197 30 100.0 34 .............................. ATGTCCATAGACCCCGTCCCCGTCACCCTCGAAG 108261 30 100.0 36 .............................. CGCAGCCGTTCACGTGCGACGCCGAGCGTGGCCCGG 108327 30 100.0 34 .............................. GCCGCGAGTGCGGCCATGACGGCGCCCAGTTCCG 108391 30 100.0 34 .............................. CGGTAGTCCGCCTCGACGACGGCGAGCGCTCCGG 108455 30 100.0 37 .............................. GCCGTGTCCAACACCAGCCGCCACGACGGGCTGTTGC 108522 30 100.0 35 .............................. TGCGGGTCCGGCGCTGTCCTCGACGCGCTGCCCGC 108587 30 100.0 37 .............................. GTGCGGCTACCAGGGCGATCACCCGATACATCTGACG 108654 30 100.0 35 .............................. TTGCGGAGGCCGCAGACGTACCCAACCTTCCCGGG 108719 30 100.0 36 .............................. AACAGGCTCATCTGGCCGCTGAGCGGCTGGTTCACG 108785 30 100.0 36 .............................. TTGATCAGGTCTGCGGCGGCCACCTGATGGCGGTGG 108851 30 100.0 37 .............................. CCGTCCACCACTGGGGCCATCGGGTGGACGACGTCCG 108918 30 100.0 37 .............................. GTGGTCAGCGGGCCCTTCTTCTCCGCTGCCATATCGG 108985 30 100.0 36 .............................. CGGTCTGCCGCTTCGGGCCGCCGCTTCGGGGCGTCG 109051 30 100.0 36 .............................. CGGCGGTTGTGTCCGGCTGCGGAGCCAAAGATGACG 109117 30 100.0 40 .............................. CCCGTGCCGATGCTCTGCTTGGCCCACGTGAGCGGTCGCT 109187 30 100.0 36 .............................. GCGATGACGCCTGGAGCATGATCCGGCTGTCGGACC 109253 30 100.0 39 .............................. AGAGTCAGGGGGTGGGTTCTGCGTGCTTGCCGAGTGCTT 109322 30 100.0 38 .............................. ACGAAGCTGCCCGCCGAGCCGGACCGGGCGGTCGCGGT 109390 30 100.0 34 .............................. CGTGGAAGGAAGCCGCCAACGCCATCCAAGGCGA 109454 30 100.0 40 .............................. TTGCCGTCGAGCGTCCCCGTGACGGTGAGCGCGGCCATCC 109524 30 100.0 33 .............................. AACCGTGCGGTGCAGGATCGGCTCGCCGCACAG 109587 30 100.0 38 .............................. CCGGTGCGGCCTGGCGGCTGGTCGCACCGGGTCAAACC 109655 30 100.0 34 .............................. CGCGACGCGAGCGCGTACGCGGCCACCGACTCCG 109719 30 100.0 36 .............................. CTTGGAAGTCATCTCTCCTCGGTTACGGTGAGTGAG 109785 30 100.0 39 .............................. AGCGGCGGCAGCTGGGTGCGTGCCAGGCTCGGGACGCCC 109854 30 100.0 39 .............................. GAGACACCTGGAGGTCGATGCCCTCTTCTTCGGCCATCC 109923 30 100.0 38 .............................. GCGACCACCTGATGTTCAACATGCGGAACCCGACTACC 109991 30 100.0 38 .............................. AAGGCGAGGAATCACCTGAGGGAGCATCCCGCGTCGCC 110059 30 100.0 38 .............................. GTGACGAGGATCTCCGACCCCATGGTCAGCTCTCGCAG 110127 30 100.0 35 .............................. CCGTGCCCGTCTTCGGGGCTGGTGCCGTAGAACCA 110192 30 100.0 36 .............................. CAGTCCCGGCAGGTGGTGCGGGCGAACTGCTGGCCG 110258 30 100.0 41 .............................. GGTGGGTCGGTTCGCAGCTCCGATGCTGTGCCTGGGTGGAA 110329 30 100.0 37 .............................. ACGCAGCTCTCGTGCTGGGGCATCGCCATGCGGGCGA 110396 30 100.0 34 .............................. GATGGCGCGGATCGCCGCCCCGTTCTGTGAGGTG 110460 30 100.0 39 .............................. AGGTGTGCCGCCGGTTCCACACGATCGCCGACGTCACGC 110529 30 100.0 35 .............................. AGCGGGGAAGCGGCCACGGCCGGCTCGGCAGCCGC 110594 30 100.0 37 .............................. TGCCATCAGTACGGCCCCCAAATCGGCGAGGGCTCGC 110661 30 100.0 37 .............................. CTATGAGCTGCCGGATCACGGCCGCGTCGTGCTCCGC 110728 30 96.7 0 .............................T | TC,T [110752,110756] ========== ====== ====== ====== ============================== ========================================= ================== 44 30 99.9 37 GTCGCTCATCACCCCTGGAGGGATCGCAAC # Left flank : CCACCACCGTCCACCATCGGGCGCTACGCCGGAAAGTCTCCTACGAGGAGCTCATTCACCTCGAAGCTCTCAAACTGGTCCGGCTCTGCCTGGAGGACGCCGCCTACAAGCCGTTCCGGCCCTGGTGGTAACCGTGTTCGTCATCGTCGTCTACGACACCCTCGCTGAACGCAATCCCGCCGTCCTCAGAACCTGCCGGCAATACCTGCACTGGGTGCAGCGGAGCGTCTTCCAAGGCGAACTCTCCACGGCACAGCACCGCAAGTTCGTCAGCGCTATCACGGCCCAGATCGACCCGAGCTATGACAGCATCCTCATATACCGCACCCAAGGCCCCCACAACATCCAGACCGACCTCATCGGCCAAGCCCTCGGCAACACCGACCCCGTTCTGTGAACCACCCCTTCTGACCTGGGCTTCTGCACTACCGGCGGGTCGCTGCAAAACACCTCGCTCCGGCGCCATGCAAGGTGTCTCTGACCTGCGACTTTACCTTGGG # Right flank : TGGCCTTTCGCCTGGGTATTGCGCAGGAGCGAGGACGTATCGCTGGCTACTGAGTGTCACCGTTGCCACGCAGTCCACGGCATTAGTGCTGCTGGCCGGGTCCTGATGCGCGTCGTGTGTTGAGTCGTTGTAGGACGGCCTGGGTTTCGGGAGAGGGGGCGACGCCGAGGGTGTTGAGGCGGGCGTCGAGGTGGCGGGCGCGTTGGCGGGCTTCGTCGGTGCGGCCGAGATCGAGGAGGAGGCGGATGGCGGAGCGGGTGGCGCTTTCCATGTCAGGGTCGAGGGCGCAGGCTTGGTCGTAGATTTCCAGGGCTCGTTCGTTGTGGCCTGCGCGTTCGTGGAGGGCGCCTAGTTGGAGCAGGGCTTTGACGCTGGAGATGGTGAGTGGCCAGCGGTGGTCCTGGTCGAGCCAGTCGTAGCGCAGGCCCTGGCCGAGTTGTCCGTGGCATAGGGCTGCGGCGGTTTCGAGGGCGGCGCGTTTCGCGTGCTCGTCGGTGGCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCATCACCCCTGGAGGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //