Array 1 26923-28468 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADQTW010000004.1 Corynebacterium diphtheriae bv. mitis strain 08-19 NODE_4_length_184281_cov_75.632525, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 26923 28 75.0 25 TCA..CA.................TC.. GGCGGTCCAGTTCTCAAAGTCCCTG A [26939] Deletion [26976] 26977 28 85.7 33 ..........C...GAC........... CAATACATGAGGATTGACAGTGCTGATTATGAC 27038 28 96.4 33 ..........C................. ATACTGGGTGTGTCTCGTGGATCCGTTAACAAC 27099 28 96.4 33 ..........C................. AAGGGTAGCGTGCAGTCACGACAAAACCAAGGC 27160 28 96.4 33 ..........C................. GCTGGGGGAGATCAAAACCGCAGGGACGAACGG 27221 28 96.4 33 ..........C................. CCGGCGTCGGCTTTTCCAGCTCTGGCCTTGAGG 27282 28 96.4 33 ..........C................. CATGATGCCTAGCAACCGATCTTGATTAGTCTG 27343 28 100.0 33 ............................ CACAAGAAGAGCTAAAAAGGGCAATCCGGCAGG 27404 28 100.0 33 ............................ CACCCCACAAAATTCGGCACCGCTATGCCACTG 27465 28 100.0 33 ............................ CGTACATGTGGACAGGTCAAGATGACCAAATGG 27526 28 100.0 33 ............................ GCCCGCGTTCGAGTGATCGCGGAAAAGCTTCAC 27587 28 100.0 33 ............................ ATGTGGTGGGATGCGGTATGAACTGTTTCTCGG 27648 28 100.0 33 ............................ GGAACAACAACGAGACTTTGATACAACCCTTGC 27709 28 100.0 33 ............................ GACCGCTATAACGACCTCATGGCAGACCGGTAC 27770 28 100.0 33 ............................ GGGTGGTCGTTCCCTCATGCACCGTTTACGGAC 27831 28 100.0 33 ............................ TGGATGGTCTTACTATTGCCGGTGTGCAGGGTC 27892 28 100.0 33 ............................ GTGTTGGGCGAAGAGGATGGTTTTTTGGGTTAG 27953 28 100.0 33 ............................ CTGAATCCACCGTGAAGCGCGCCGTAAAAGAGC 28014 28 100.0 33 ............................ TGCGGCGCGATCACATCTGTCACATCGTGTTCC 28075 28 100.0 33 ............................ GCGACGCCGGCTCAACGTGGTTTCACAATCTTG 28136 28 100.0 33 ............................ CCCAGTGGGATAAGTCCATGGGTGGCCGTCCCG 28197 28 100.0 33 ............................ TTATCGCCGTGGAACGTAACGGCCTGCGGAAAG 28258 28 100.0 33 ............................ CCCAGTGGGATAAGTCCATGGGTGGCCGTCCCG 28319 28 100.0 33 ............................ GTCCTGATGTTGATCCCGACGATCTCGACGCGG 28380 28 100.0 33 ............................ TGACCTGCGCGGCGGTCGCATACCCTACCGGCG 28441 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 26 28 97.8 33 GGCTCATCCCTGCTAGTGCGGGGAAAAC # Left flank : TACATCAAAAAGCTCGAAGCGATCAGCGTAACGATCCAAATAGTCTAGGACGACCTGATCTTTCCCTTTTCGAGCAAGACGACGTCTCATCTTGTTGAACCATTCAAGAAAATCAAAAGGTTCCACGTCCATGTCGATATCCATGGAATGGGCACGCCAGAAAATAGCCAGCAAAAGCCGCATCACAGCATAGTCTTGAGCCGGGGACTCCCCCTGAATATAGGCAACCTGCACCTCCCCCGCGAAAATATCTCGTATTCCAACTGAAATCTGGTTACCTTGAGTATCAAGAGCCAGAATCCAGCGGATCTCCAGTAACGAAGCCATCACCAACTCCTTCCTGATTGTTTTAAAACTCCCAACTTAGGAAGCACTTTTCCACAGAATACACTCTATAGATATTAAAAGTTAGTTTTTTCAAAATTTTTTAGTAGAGCCATCATTTACTGATTTCTCTGAATGAAAAACACAGATTCCAAAACCCGTTCTTCAACAAAGAT # Right flank : CACTTATCAAGCTGCACGTTTAGAGCCAGTTAGAGCTTATTACATATAACTTTGTTTCAGCAATTTTTCTGCTTCATCTTTATTTCTACTCTTTTAGGATCAGCCATTCACCCAAATTTGCTTAGTCCTTTCTTCTAGCCATAGGCTGGCATTGTTCCCTGCGATCAGGGATGAGCCTTTTTAATATCTCTACAAGATTTACATAGGCATACTTCCCCGCACCAGCGGGGTTTCCTTTTATGCGTCTTCCTTTGGGCAGACTTCCACCTCTAATCCACGTTCATTGGTATAACGCACTAGGAATCGACCTACACGAGCCTCTCCTCTTTCGTCGAAAAGCAACGCAACTTGGCCTTTAATCAAACCGGATCGTTGCCATTCTGGTGGTGTTTGTGCTTCGAGCGAATCAATAACGGCATTAAAATCCGAATCTCTACGTGTCATTCGGGTTGGCAGGCGCACTGTGTTTCCAGCCAATGCCTCAGTTTCTTTCCAAGTAA # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCATCCCTGCTAGTGCGGGGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.50,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.41 Confidence: LOW] # Array family : NA //