Array 1 63531-66499 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMOT010000001.1 Eggerthella lenta strain BSD2780120875_150330_C12 NODE_1_length_852071_cov_11.2502, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 63531 33 100.0 34 ................................. ATGCCCGGTGACGCATCTCCCATCATCTCCGGCA 63598 33 100.0 33 ................................. AGGAACGTGAAGCCGCGCGTGAGCTTCGTCATG 63664 33 100.0 33 ................................. GAGACGGTCGCCCGATCGTCCGATGACGGGGAG 63730 33 100.0 33 ................................. ATCACTCGCAGCATCTTGGGAAACCTCCTTTTC 63796 33 100.0 34 ................................. CGTCGCGTGGTGCAGGGCGCGCAAACGCTGTCCA 63863 33 100.0 35 ................................. AGCTCCAATACCATTTTAAATTTTACTTCCAACGG 63931 33 100.0 38 ................................. AACGAACGCTCCGACATTGACGGCATCTCCCGTAGGGA 64002 33 100.0 35 ................................. TCCAGCGCGCTCATGATGGTGGCCCAGTCCATGGC 64070 33 100.0 33 ................................. TTCGCAGCCGCGCCTTTCGTGGCCATGTCTCGC 64136 33 97.0 34 ......T.......................... ACTCCGAGCGACTCGCCCGTGCGGGCGCTGCCGA 64203 33 100.0 34 ................................. TTGGCCGCTCATCGGTACAGACCAATCGCAGGAA 64270 33 100.0 33 ................................. GTTGTCAAGCTCTGCTTCGCCTCCCAGTCAATG 64336 33 100.0 33 ................................. GGCCAGCAGCGCGACGCAGCGCCTCATGGCGAC 64402 33 100.0 33 ................................. CTGTAATGCCTGATCTGTTTGCCGATGTACTCA 64468 33 100.0 33 ................................. GAGAGCGCGGAGCATATGACGCAGTGCGTCTGC 64534 33 100.0 33 ................................. GTCAACGCCGGTGGCACGTGGCCTGCGTCCCTG 64600 33 100.0 32 ................................. ACGCGGCTGCCGTCCTCCATGCGCGCGTCCAT 64665 33 100.0 33 ................................. GAGACCGAAAGCCGCGATTCGTCGAGCATCGTC 64731 33 100.0 35 ................................. GCTTTCGTCTGCTACCTGCTCGTCAGGGATGCGCG 64799 33 100.0 33 ................................. CGCCTGCTTTGCAGGGTCTTGCAGATCGGCGGT 64865 33 100.0 35 ................................. TCCTTGACGTAGAGATAGCGAAACTTGCCGTAACG 64933 33 100.0 33 ................................. AACTTTATCACACTGTCTCGGCTCGATAGCTCC 64999 33 100.0 34 ................................. AAGCGCGGGATGCTCGTTGATCTTGTCTACTACA 65066 33 100.0 34 ................................. CGGCATGGACGGCGATGATCTTGTTGAGGGCGTG 65133 33 100.0 33 ................................. GGATGCGAACCAGAAGAGCTCTACGGTCTCAAG 65199 33 100.0 34 ................................. CATACTGTGAAAGGGGTATAGCCAGGTTCGACGG 65266 33 100.0 34 ................................. CGTCTGGTGATCTCGTCCATTCGATCTGCTCCCT 65333 33 100.0 33 ................................. CGTATCCCAGTACTACCCTGCGGTCGCTGGCGG 65399 33 100.0 33 ................................. TGCCATGCCCTGACCCCTTCAACGGTGGACATC 65465 33 100.0 33 ................................. CGACCTTGCGCGAGACGATGCCCGAACCGTCGG 65531 33 100.0 35 ................................. TCTCCGCTTTCGTCTCGCGGCCATTCCATCCCCGG 65599 33 100.0 34 ................................. CACGCACCCACCATGTGATAGCTGGTCGATCTGT 65666 33 100.0 35 ................................. ACGTTGACCTACGCTGAGAACATGCAGGACAATTC 65734 33 100.0 34 ................................. GTCTCTGCTGGAAGCCAATCGGTCTACATCGAAA 65801 33 100.0 35 ................................. GGGCATATCGGCATAGCATGGTACGAGGAAGCCGA 65869 33 100.0 33 ................................. AACAGAATGTCCTCGTCGTGGGCGCTGAAGCCG 65935 33 97.0 33 .....................A........... TGACGAGTATCGCCTATGGCTTGAAAGCGAGGT 66001 33 100.0 33 ................................. AAGCACACCACCAAGCAGACGCGCAGCCTCATA 66067 33 100.0 34 ................................. GTCATCTAGGACGTTGCCGGAAACGACATCCTGC 66134 33 100.0 34 ................................. GTGCCTCACCGGCCGGCACGTACGCTCGCGCACG 66201 33 100.0 34 ................................. CAGAACTTCGCGATGGCGAAGCAGAGCGGCTACG 66268 33 100.0 35 ................................. GTCCCCGTCGGCGGCTTGGTGTCCATGCTGATGAT 66336 33 100.0 33 ................................. TCGTCCTCGCTGAGGAAGTAGGGGTCGAGCGAG 66402 33 100.0 32 ................................. AAACGGTTGAACGATTTGCGGACGCTGGCGAG 66467 33 97.0 0 ................................C | ========== ====== ====== ====== ================================= ====================================== ================== 45 33 99.8 34 GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Left flank : TGCGCTGCGATCTAGACGGCTACCCGCCGTTTCTATGGAAGTGAGATGGTTGGCATGCTGACAGTGATTACCTACGACGTGAATACCGAGGATCCGGCGGGCCGACGTCGCTTGCGGAAAGTGGCGCGACATTGCGTCAATTACGGTCAGCGTGTCCAGAACTCAGTGTTCGAATGCGTTGCCGATGCTGCGACGATGGTTCGTATCAAGAGCGAGCTCGTCGAGCTGATCGATCCGGAGAAAGATAGTTTGCGATTCTACAGTCTTGGAAACAAATATGAGACGAAGATTGAGCATGTAGGTGCGAAACCAACGTACGAAGCTGAAGGGTTCTTGGCGTTGTAGGACCATGGTGCGAGCATGAAGCTCGCATATGACATACGTGAGGTTCGCACCAAATAGTGTGACATAAAGATGCCTGACGCGCTTGTTGCGTGTACCTTGTTTGTCTAATGACACTATATGTTGATCGAAGCAGTAAATTTGCACATAATATTGCA # Right flank : CTGTTCGGGTTGGCTGGCAAGCTGAACGCTGACACGTCATCGTTCAGCTTGCGGGCGCGCGGGTTGAAGTCGCGAGCAGCTGTCGTGGTACGGCCGAGGCGTGGTCGGTCGTACCCCTCGCGGGCGCGCGGGTAGAAGCAGGGTATCCGGGTTGAAATCGAGCAGCGTTTCGGCAGGTTCTGTCGCTCTCAAACGAGGGGGTAACCGATCCTTGCCGTCGCTTCCTATCGAGACGCGGATTGATTCGCTGATTCCGAGTTTTGCTCGTCGGACGCCTGCGCCGAGTTGTGAAAGGCGCAGGCGTCCTTCGGATCGCTACTCCACCACCAAATCAACGAGCTCAAACGTCGTGCAGTCCACCAGCCCGCGATTCGTCAGCCGCAGCTCGGGCAGGCATGCCAGCGGGATCAGGGCCATCGTCATGAACGGCGACGGCATGGTGCAGCCGATCTCGGCCCATGCGCCCTCCAAGGCATGCACCTTCTCGCTCATCGTCACAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.10,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //