Array 1 48202-47440 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_MTBV01000049.1 Actinobacillus suis strain ATCC 15557 Contig_49, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     48201	    36	  97.2	    30	..C.................................	TTTATATGCTTACATCACTTCATTCACTGC	
     48135	    36	 100.0	    30	....................................	TTGCTTTACGAAGGTATAAGCTCCGTCCTA	
     48069	    36	 100.0	    30	....................................	GACAGCATATCTGTTAAACCCGGTCAGAAT	
     48003	    36	 100.0	    30	....................................	TTGTTTACTTCATTAATTCGGTCAGCGGTA	
     47937	    36	 100.0	    30	....................................	CGCATACATTAGGCATTACCCTCAACCACT	
     47871	    36	 100.0	    30	....................................	AAATGGGGCGAGCCAAAGCGAGAGCGAAAG	
     47805	    36	 100.0	    30	....................................	AATCAGGGCACTTCTTGCTCAAACGGTGTA	
     47739	    36	 100.0	    30	....................................	GCGTTATCCGCAAAAGTGAATAACCCCGAC	
     47673	    36	 100.0	    30	....................................	ACGAAGATTCGGAGCAACTCGCCTTGGTCA	
     47607	    36	 100.0	    30	....................................	TAACTATCTTGATCTAAAGTAATCTTTTCT	
     47541	    36	 100.0	    30	....................................	TCAGTTGTGGTGCTTCTTCATCGCTTTGGT	
     47475	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        12	    36	  99.8	    30	GTTGTAGCTCCCTTTTTCATTTCGCAGTGCTATAAT	                              	       

# Left flank :   ATTTACCTTGATTTGTGCAGCTTTATGCCACACCAGTTTTGCAAATTCTGCTGAAAATCCGACCGCTTATACGGAACACGCCAAATACAAAATCTCCGCTACCGATATGAAAATCTTGGTTCGTCAGTTAAATAATATTGAACAATGCCTTTTCCCCGATCTTGCAAAACCGAATTACCAACAAATCTATGACAATTGGTCTGTTGCCGAAAGCATGACGATGCTCTATTTCCAGCAAAATTTATTAAAAGAGTTAATTGGCGAACACAATGCTCAATTGATCGAAAAAGACGAATCCTCACGTCTTTACTTTGAGCAAATGCATGAAAAATATAACCACCAAAAAGCTAATGTTGATAAATCTCGCTGCGAAGAGTTCAAACCAATCTACGCTCAAATCAAACAGCAAATTGAATACTCAATACCACAGGTGTATAAATAAGCTTTCTTAGTTATTTCACATAGCTACAATTCGACTCTGGTACACGACTTCGTCAGGA
# Right flank :  CGGGACTCTAAAAAGCCTTGAGCAGTAAGGGTTCAAGGCTTTTTTATTATTAAAAAAATTGCCTTAAAACAGTAAAAGTTGGTTCGAATTCACCTTTTTTTCTTGCAATTTTTTCTCTCCAACTAGAATTTCCATATTGGCGAATTGTTTTTCAGTAATAGAAATGCAACGAATTGAACCCTCTTCAGGCAAATGTTCTACTAGTCTTTTATGATGTTTTTCCATTGAATCTCGCCCTCGAATAATTCGAGTATAAATAGAAAGTTGTAACATTTGGTAGCCATCTTTCAGCAAAAATTGCCGAAATTGATTTGCGGCTCGCATTTTGGCTTTGGTTGTTACAGGTAAATCAAATAATACAATCATACGCATAAACACATTCTCACTCATATTGATGCTCCGCAAGCGGTAGAATTTCAGGAAGTTTTAACAAATCTGCATTTCGTTGAGTTAATGCAGATTGAAATGAACTCACGCTTCGCTCAATACCGGTTAAGGTA

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTAGCTCCCTTTTTCATTTCGCAGTGCTATAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:61.11%AT]
# 	Reference repeat match prediction:         R [matched GTTGTAGCTCCCTTTTTCATTTCGCAGTGCTATAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-0.90,-0.40] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [66.7-60.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.41,4.5   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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