Array 1 275451-276081 **** Predicted by CRISPRDetect 2.4 *** >NZ_PZIC01000001.1 Staphylococcus haemolyticus strain SNUC 4966 contig001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 275451 36 100.0 30 .................................... ACGAATAACACAATATATAGTATTAACAGC 275517 36 100.0 30 .................................... GTTAGCACCATTGTTTTTATGGGTAGCGCA 275583 36 100.0 30 .................................... TTATTGAGTTTTTTACAGACTTACAGGATA 275649 36 100.0 30 .................................... CTTGTTGTAACCACCGCCGATTGTTTTTGC 275715 36 100.0 30 .................................... TACCTGCTTGACTACCATCTAATCCAGAAT 275781 36 100.0 30 .................................... AATTTGCGAAACGATATTGTGACAATCAAT 275847 36 100.0 30 .................................... ACAGAAATATTTATGAAATACTTTTTAACT 275913 36 100.0 32 .................................... TTAGCATCATCATCATTCATCTTTTTAGTTAC 275981 35 94.4 30 .................-..........C....... GTTTTTTTAGGGGACATAGGGGGGTGACTG 276046 36 72.2 0 T................C......C.C..A.ATTTA | ========== ====== ====== ====== ==================================== ================================ ================== 10 36 96.7 30 GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAGAC # Left flank : CGATACAAATATAATTGTATTAACAGGATCATTACATTTTCTATCTGAAGAGTGGAAATACAATAACTATATTAGAGATGGGAAACAAAAAAACACATCTGAATTTCTAGAAGAATTAGAGTGGAACGCGCCACTTGATTTTGATAAGAAGGATCTAGAAGAAAGTTTGAACCGATTCATTTTAACTTATCAAGATAAATTAGAATTATATCCCATAATATCAAACTATCAAATAGCACAAATTATGTTATTTAATGCCATAGATATATATGTTGGGATTTCATATATGCAACATTGTAATCATAAATTTAAATTAAAAATCAAAAGTGAATTGCTGCCTAAAAGCATCAATAAATATTTAAATCAACAATTGCTGAATTAATTACTTTGCTATAATTAACTTAATAAATTATTATTATCTTAGTGAAGGAGTTTAGCTAACTTGTTCACTAAGATACCTTTTTTTGAACTAATTCTTTTAGCGAGTAATATTGCTAGAG # Right flank : AAATTAATGATTACTAAGTGCTGTTACTTGCTTACTTTTATTATCATGATCAATCAATTGATCAAAAGTATAGAAATATTTAAATTTAATAAAAATATTAGTTGACTAAGCATCCATGATAGCAATATAATTAATTTATAGAACAAGTTTAGCTAACTTGTACTTATACCTAAAATTACAGAATCTACTAAAACAAGACTTTATGTCGTGTTTATCCCATTAATTTATTAATGGGATTTTTTCTTTTTAATTAGACAAATCGCCAACGATGATGACTATCGTTGGCGATTATTTTTGTTTAATGTCATTTAATTACACATTATCATCAGTAATTTGACCAATCCAATAACTAGCTGCAAATCCAATGATTAAAGTGATGATTGAAAGTGTCCACTCGATACCAGTTTGAGGAAGACCAGGGAATACAGCATATATGGAGCCAATTACGAATCCAGTTATTAATGCGAATGTGGTATAGAAGTGATGATGTAGGAAGTATT # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.60,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //