Array 1 11401-12648 **** Predicted by CRISPRDetect 2.4 *** >NZ_CDRU01000209.1 Escherichia coli strain 26A_L1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 11401 29 100.0 32 ............................. CGTCCAGTGATAGAACTCGACGACGGAACAAC 11462 29 100.0 32 ............................. ATTTTTTCCGTTAGTTAGTGAGCGTGATAACA 11523 29 100.0 32 ............................. AGGGTTACAGAAAAGAAGCATCGCAACTTGAT 11584 29 100.0 32 ............................. CACAAGAAAAAGATATCGCAGCGTCATTTATG 11645 29 100.0 32 ............................. CGAACAGAAAAACCGTTCTCAGCCAGCGTCAG 11706 29 96.6 32 ....................A........ CAAACGATGAGCGGGCCAACGAATCGCCGTTG 11767 29 100.0 32 ............................. ATCCACGGTTCGACGCCGATCGCCGTGGCTAT 11828 29 100.0 32 ............................. CAGGATTGAAATACAGCCTCGGCCTGGGACAG 11889 29 100.0 32 ............................. AGGCGAGGGAGATCAGAGATCAGGCTATTACA 11950 29 100.0 32 ............................. AGATCGGCGGCCAGTGGATAACCGTTATCCCC 12011 29 100.0 32 ............................. GTGTGGTAATTGGTGGTCTGGCTGGTGGTTTA 12072 29 100.0 32 ............................. AGAATCTGGACACTGCATATACCGCAATCCGT 12133 29 100.0 32 ............................. CCAGCCGTTCAGTATTGCCGGTGTCAGCAAAA 12194 29 100.0 32 ............................. CCAGCCGTTCAGTATTGCCGGTGTCAGCAAAA 12255 29 100.0 32 ............................. GAAAAGCTACTTTTGTGTTCAACTGATGCATT 12316 29 100.0 31 ............................. CCGCGCAAATCCAGCGAGCCGCCGACGCTCA 12376 29 100.0 32 ............................. TTGCAAACCGTGGCAAACGCAATTAACAAAAA 12437 29 100.0 32 ............................. ATTGTTATAATTATTTATTGAAATATCATTCC 12498 29 100.0 32 ............................. AATCTATTGTGAATTTGAAATGGTCCAGCACT 12559 29 100.0 32 ............................. GGTAAAAACACGGTCTGAACCGACATTCATGT 12620 29 93.1 0 ...........AT................ | ========== ====== ====== ====== ============================= ================================ ================== 21 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTTGCCGCTGGTGAAATTGAACCACCACAACCCGCGCCGGATATGTTACCGCCTGCCATCCCTGAACCTGAAACGTTAGGCGATAGCGGTCATCGAGGACGCGGCGGATGAGTATGATCGTAGTTGTAACGGAAAATGTTCCTCCACGTTTACGTGGACGGCTCGCTATCTGGCTACTGGAAGTGCGTGCCGGTGTGTATGTCGGAGATACATCCAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCTCAACTGGCAGGTTGCGGAAATGTAGTGATGGCTTGGGCGACCAATACCGAGTCAGGTTTTGAATTTCAGACCTGGGGTGAAAATAGACGTATTCCGGTGGATTTGGATGGGTTGCGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTATCCGTTCTTTAAAAATAAGGAAATGTTTTAATTTAGTTGGTAGATTGTTGATGCGGAATAAATTTGTTTAAAAACAGTTATGTATGCTTAGT # Right flank : GGGCGCACTGGATGCGATGATGGATATCACTTAGAATTCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAACGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAATTTGTTGCTTCTACCGAAAGTACGGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGTGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCACTGTTGAAATACAATTTATCGCCAACA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //