Array 1 92400-92855 **** Predicted by CRISPRDetect 2.4 *** >NZ_PHHA01000009.1 Conservatibacter flavescens strain 7.4 contig9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 92400 36 100.0 34 .................................... TACAATTTCCGAGTTATCTTTCAGATTGTTGACT 92470 36 100.0 35 .................................... TATGATATCGCTCACCTCTTTAACTGAGCTGTGAG 92541 36 100.0 35 .................................... TATACCACCGATAAGGATAGGTGCAACTTCACGGA 92612 36 100.0 32 .................................... CTGCTTTCTGTCTCTGATTAATCATGATTTGT 92680 36 97.2 31 ..................C................. CGTTGGATATAACAAATCTGTTACAATGAAA 92747 36 100.0 36 .................................... CGCCATAAGGTTTTGGGTAGTTACAGTATATTTCAT 92819 36 86.1 0 ..................CT.CT........A.... | A [92852] ========== ====== ====== ====== ==================================== ==================================== ================== 7 36 97.6 34 GTCGAAAGACCAGCCCTGTCATCAAAGGGATTGAGA # Left flank : TTGACAATCTCACATTTCATTTTTAGGGAGGTATTATGTATCTTATTGGTTACGATATTAGCAATCCCAAACGATTAGCAAAAGTCTATAAAACCTTATTGGATTACGCTGTGCCTATTCAATATAGTGTCTTTCTTTTTGAGGGAAGCAAAAACCATTTACAATCTTGCATTGAACGCTTATTAGAGATTATCCACACCAAAGAAGATGACCTGCGTATTTATCAACTACCGACCAATGGTAAACAGTGGCGATTAGGAAAATCTTTTCTACCAGAAGGTATCTTCTTAACGGGTATGCCAATGGGGATTTATTAAAGTGTTCTGAAAGGCTATCGCAAGCAGTCAATTTTTGCTAAAATATAGCACGTCTCACTTATAGGGAACGGTTTAAATTGTTTATATTTCAATCAAATCCAAGGTTAGCTTTGCAACCTCTCTCCAAAGTTGGCAACCCTATTGCTAACTTTTTGAAAAATAAACCTTTTTTACCCTACCGCA # Right flank : AAATAGTTAAAAAATAAGCAAAGGTTAGCCGCTCATAAAATCCTGCCTATATTTGGTTTGATAATCCAAAGCAGAAAAATAAAGCATTTTGACTGCCGTTTTCTCTCTCTACTTTCTCTAGGCTTCTCCCAAAAACAGAACAAGCTGAATTTGTTTTTTAAGGTAATTTTTACTTATTCTATCATGTAGTTTTTGTAAAATATATCAAACAAAAACTAGCTTAAAAACAAAATTATGCATGATATATCAATCAAAAAAAGTGTATTAACCTTACAAGTCTATATTGATTCTGTATGGCGTGATATGGCTGAACTTTACTTTAATAAAGATTATGAATTAGAAACAATGGAGTATTTAACTGATTACGTTGTGGATTTTTTTGAGCAAACTAACGCAAAAGCTATATCAATTAATTACCCAGTTAATGTGTTTATTGAAAATGCTGAACTGCTAATGACTACGCTCGGTGATATTATGCCTGCTGGTGCAAGTCGTCGTTA # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAAGACCAGCCCTGTCATCAAAGGGATTGAGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [12,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.00,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA // Array 1 5539-5371 **** Predicted by CRISPRDetect 2.4 *** >NZ_PHHA01000016.1 Conservatibacter flavescens strain 7.4 contig16, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 5538 36 100.0 30 .................................... TCGTGAGCGTCACTGCTTGAATGCCTAACC 5472 36 100.0 30 .................................... CCACATCAAAGCGATATTTACGATTCATTG 5406 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 3 36 100.0 30 GTTGTAGCTCCCTTTCTCATTTCGCTGTGCTACAAT # Left flank : ACAACCTAGCACGCAAAAAACAAGAAAGCTCATCAATAGGGAATTAAGAAATCCTATATTTAAACCAAAATAAAATACAGGGATAGCAAATAAAAACAATGCAGATAAAATAATTAAGAATTTATCTTCAAATGTTGTCGCGGAAATATAACTATCAAAAAAAAACTCTCCCTATACCAAAGAAAAAGGCTAAGGGTAAAAAAATAACAGCTAACAATAACGAGAGGATTAAACCAAACGAAATAATAGACAACGCGCTAAGAAATAGAAATCCCATAATTATCTCCTTTCATTTATTTTTAGGACAAAAGAAAAAATTGTCAATAGATATCGAGAAAAAAACATGAATAATCTACAATTATCAGTATTATTAGGTGCAGTTGATAAATTATCTGCACCAGTTCGACAATCATCAAAAGCGGCAAATGAATTAGCGAAAGAAATTGTGGTATAGGTTCTTTCCTTAAATAATATTGATGGAAATAAATCCTAAGTATCGT # Right flank : AGGGTCGCTTTAAGTGATTTATAATCAATGGGTTATGAAGTTTTCTTTCGAGAAATTTTCATAAAAATTAAGGTTTAAGCGGTAGCATTTAAGTAGTTTTTTGCTTATTTCTATCGCTTATATTTTAATGTTTGAGGCTAAAAATGGCGTGTATATTGTACTTACAACGCCATTTTTTACTTTTATTTAGTTCAAAATACATACAATTAGATGATGATTTTATGGATCATTATAGTGAGATGGTTAAACTAAAATCACTAAAAAAGTAGCATTTGGTTTGCATTAACTTTTTGCTCTTGCACTTTTTTCTCTCCAAGTAAAATCAGCATACTGGCGAACTGTTTTTCCGTTACCTCCAAACACCTTACCGATCCCTCTTCAGGTAAGTGAGCAACTAGTCTTTTATTATGTTTGATTAATGCATCTCGGCCACGCACAATGCGTGAATAGACGGAAAGTTGTAGCATTTGGTAGCCATCTTTTAGTAAAAATTGGCGAAA # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCTGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.00,-0.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : NA //