Array 1 27849-32855 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHAW010000022.1 Psychrobacter salsus isolate Psychrobacter salsus DD48, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 27849 28 100.0 32 ............................ TGTTAGGTCGTGACCTGAGCGATAAAGAACGC 27909 28 100.0 32 ............................ TATGCCTGATGACATGATGATGCCTGAGCAGA 27969 28 100.0 32 ............................ CAACTGGCTAGCAATATCGTTAAGGCTCTCAC 28029 28 100.0 32 ............................ TATCGTAAATCCACCGATAGCTCGATGACTCC 28089 28 100.0 32 ............................ GCACTCGCTCATAGTGTATTGTCATAAGCTCG 28149 28 100.0 32 ............................ GAAGGCCATGTATTCAAATCGGCTGACGCTAA 28209 28 100.0 32 ............................ ATTGTTTCCGCTACCCACTCACCACGACCAAA 28269 28 100.0 32 ............................ ATGCTTGCGCTTAAACTGGTTTAGAAAATCAT 28329 28 100.0 32 ............................ GTAGCTGCCTGTCATTTAGGCGCTCGCCTGCC 28389 28 100.0 32 ............................ TTTGCATATAAACGGGATTTAAAGCGCGTGTG 28449 28 100.0 32 ............................ TATTTGGCATGTTTGGCGGCTTAGTTGGCGGC 28509 28 100.0 32 ............................ AAAAGTGGCTATCGATGAGCAAGTACTGGCGC 28569 28 100.0 32 ............................ ACAAGACAGAGAACGTAGTCACTAAGCGGTCT 28629 28 100.0 32 ............................ TTGCTTAATCATCATTATCATTAAATGAACAC 28689 28 100.0 32 ............................ GCTTATACTCAGCAAAAGCTGCATCTGCTAAC 28749 28 100.0 32 ............................ TCAAACCCCGAAGGCCGCTTGCCTAATCTAAT 28809 28 100.0 32 ............................ GTATTGCTTAATCGTTGACAATTTAGACTTTT 28869 28 100.0 32 ............................ TTTTGACTGTTATTTACTTTTGGCATGGTTAG 28929 28 100.0 32 ............................ TTGCATCGCTTTAACCCTACACTCTTCAACAT 28989 28 100.0 32 ............................ TGATTGTTGATCCCGAAATCGAGGCAAACACA 29049 28 100.0 32 ............................ AGCATCGAGTAAATACTATCGCTGATCGACTT 29109 28 100.0 32 ............................ TTACTGACGTTCTCGGTGCATGATTTCTATGA 29169 28 100.0 30 ............................ GTTCACTACACTTATCAGCGTGTTCTTTCA 29227 28 100.0 32 ............................ AACATCTTCATAATAATAGGTCATCTGATTTT 29287 28 100.0 32 ............................ GAGGGCATGAGCAAGCGCCGTCAAGGTAACAA 29347 28 100.0 32 ............................ CGAATTGCCACAACCGCGCAGATTATGGCAAT 29407 28 100.0 32 ............................ AATAGGTCGGCAGGTAATGCTATTAAGTGTTC 29467 28 100.0 32 ............................ CTTATCATCAATAGTCCCCATAGCACCAGCAA 29527 28 100.0 32 ............................ GTCTCAAAATGCTGCTAATCCGTCTCAAAATA 29587 28 100.0 32 ............................ TCATATGTTTTCGCTTTATAAATCGACATCAG 29647 28 100.0 32 ............................ AGTTTGCATTTGGGTAAACGCACTAGCACCGC 29707 28 100.0 32 ............................ TTGTAATAACTTAGCAGGACTCGCTTTAATCT 29767 28 100.0 32 ............................ AATTCGGCAAGCTCGCAAAGGGGCGTTATGTC 29827 28 100.0 32 ............................ TGCCTGAGCGTGAGTTAAAGAGGATAAATCAG 29887 28 100.0 32 ............................ ACTCTCAGCATCAGAGATAACTTGGTCAGCAA 29947 28 100.0 33 ............................ TTTGGAAAACTTGCAGGGAGGGTATGTAGTATG 30008 28 100.0 32 ............................ AACACTCTCACCGCCATACACGTTATGACCTT 30068 28 100.0 32 ............................ ATAATTAAGCCTCTCTAATAGCAGCAACGACT 30128 28 100.0 32 ............................ TCCCTGCAAGTTTTCCAAAGGTTCATGCCGAA 30188 28 100.0 32 ............................ AACGCCATTGGAGTCCATGAGGTCTTGCCAAT 30248 28 100.0 32 ............................ CTGACACACCAACAAAACTTGATGATGTTTTG 30308 28 100.0 32 ............................ TTCTAGAAGCCCTAACTTACTTCTAAGGTCTT 30368 28 100.0 33 ............................ CACACCAGCGCTGAACTCTGTGGTTGGTTATTT 30429 28 100.0 32 ............................ TTTTCTTGCCAGTTGCCAATGTCTACATCGTC 30489 28 100.0 32 ............................ CAAATACCAGCAGGAATAGCCACCAGTATCAT 30549 28 100.0 32 ............................ GTTGTCTCATTCATCATCTCGTCGCCCCTATC 30609 28 100.0 32 ............................ CACGGTGGCCTAACAAACGTGCCCGAAGAGTC 30669 28 100.0 32 ............................ TCAGAATGGATCAGCAAAGCGCTGGTTGATGA 30729 28 100.0 32 ............................ TCGCCCCAAACTGCCTTATCTATAAAAACTGA 30789 28 100.0 32 ............................ TGAAAACACGTCTATCTTCGGTAAATTCGACA 30849 28 100.0 32 ............................ CTTTTAGGTGCAGAAAACAGCTATTAAGTCAT 30909 28 100.0 32 ............................ TGGACTGACAATTACACGCGCACAAGCCGAGC 30969 28 100.0 32 ............................ TGATATCATCAAGGATATTTGCGACTTTGCAG 31029 28 100.0 32 ............................ CTTAGTTTTTTGTCTCACGCGCTCATAGTGTA 31089 28 100.0 32 ............................ TTTACTGTCAATAAAGAAAGTAAGAAAAGTTA 31149 28 100.0 32 ............................ CCATTGTTGGCATCAGTGTCGTTTGTAATCTC 31209 28 100.0 32 ............................ AATCTAAATCAAATGGCTTGCATGGCTTGCTA 31269 28 100.0 32 ............................ ATTGTCATCACATTGCTGAATAGTAGGGTCGC 31329 28 100.0 32 ............................ TGCCTTTGCTGCTGGTGCTGGTGGTTCATGGG 31389 28 100.0 32 ............................ GCCCTACTCGCTGAGCTTAATCGCACACAGAC 31449 28 100.0 32 ............................ ATATTGGGCCAGTCGTCTACTCTTGGAAATAA 31509 28 100.0 32 ............................ TATCTCGAAATCGTACTAGCTGCCAACTCCGC 31569 28 100.0 32 ............................ ACACAAAATATAGATACCAAATCTCTTTATCA 31629 28 100.0 32 ............................ TATCCTTTGGGGCCTGAAAGTTATGCAGTCAC 31689 28 100.0 32 ............................ AGTCTATGGCCAATGATTCACCAGGACGGCAA 31749 28 100.0 32 ............................ TTCAGTCTCTGTTCAAATTAAAGAAAGCCGCC 31809 28 100.0 31 ............................ TACGAGGGTACAGGGCGGTTTATGAAATCAG 31868 28 100.0 32 ............................ GACTGTAGCCGTAAATGATTACAGTTATCAAA 31928 28 100.0 32 ............................ TAAACGATTAAGACTATTTGAAAAGATCGTCT 31988 28 100.0 32 ............................ AATATGGTTCGGTGACTATCTCACAGCTCCTG 32048 28 100.0 32 ............................ ATCACCAGTATAATCAGCAAAAGCAGGGAGAG 32108 28 100.0 32 ............................ GTTGAATCTGATACTAGTTTAAAGGGTTATTG 32168 28 100.0 32 ............................ TTCCGCATCGGTGACACTGTAGCCCCATTGGG 32228 28 100.0 32 ............................ ATCATAGTGCGTAGGTCTTGCTGCATCATTTT 32288 28 100.0 32 ............................ AGTAACGCGCATAAATGTTTCAGTAGGTATGG 32348 28 100.0 32 ............................ AATAATTAATTAACTTCTTGTTGTCTCAGTCT 32408 28 100.0 32 ............................ TACGACCCGTAAATTATTGATGCTTGTGTAAT 32468 28 100.0 32 ............................ TGAAATAGTCGTACCATCGTCAATGTCTGCTT 32528 28 100.0 32 ............................ CACAGTTAAGCCGTTAAACATCACGCTCAAGC 32588 28 100.0 32 ............................ GCCAAAGTCACTCAGCGTCACCACCATACCGA 32648 28 100.0 32 ............................ GTTATGATAAAAGCTCACCGTTTCGTCACGGA 32708 28 100.0 32 ............................ ATTGGCGTCAGCGTATTGGGCTATTTCTGCCA 32768 28 100.0 32 ............................ TTAGGGTTACCATCGGAATCTGTTGCAGTAAG 32828 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 84 28 100.0 32 CTTCCTCACCGCATAGGTGACTTAGAAA # Left flank : GCATGTGAAGCGCATCAATGAGGTTGGTGACAAAGCCAAAGGGCACGTTGTGATCAGACGCTACCGCCATAAAAACGTGCTCAAGCAAGCTGAAGCATTCGCTGAGCACAAAGGCATTACGCTGGAGGCGGCACTGATACACTGCGCCAAACACAAACAGGATAACAAACCCTATCCGTATATCAACTTAAGGAGCATCAGCAACAATCAACCCTACGCATTATCTATCATTCAAGAAATGGCAGATAATGAGACTCAAGGGTCGTTTAATAGTTATGGCATTAACAATTTAGCAGATAAGGTTACTGTGCCCCATTGGTAAGCTACTTATAAGGTAATGACGAATTACCCAAAAATTGGGACAAAAAACCCTTTTTTTGAGCTATTTAAAAACTTGTAATAAAATCAATCAGTTACATTAGGGCGAAAAACGGAGGGTAAAATAGGGTGTTTCACTCTCCACGCCTTGTTGTAACTGAGTTTTTTGAGGTATAATTCCT # Right flank : AGGAGAGCAGTCTGTGCGTCTTCATCATAAAGTTCTACTCGAAGTGGTATTTACCCTACCTACCAGATAGTTATTTACGTACATATCAATCTATGCCCAATATCTACTCTCTACCTCTCAAGTAGTATTCTGCTTTGTCTCAATTATCCACCCCAAACTATCACTCTAAACTACTTTTCTAGTTATCTCATCCATTCATACACCTATAAACTCTAGCTAAACTTCTAACATACTTCAGATAGAATCATCATAAATTCTATATAAAAGCTTAAAACCATAGCAAGACGTCATATACTGTCGCTTAATTTAAGTCTTTGCCTCAAAACCTCACAAATTGGCTTTCAATTGTTTGCTAATCCTCGTAAATTATTAGTGGAGGTCAACGACCAAGTCATCAACTCGATATCTTAATGGAAAAGATGTGAAATCACTATCGATCGCTAAACTACAAACATTCAACCTACTTGTATATCCAAAGATCATTAGTCTGTTTGATATTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCCTCACCGCATAGGTGACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched CTTCATCACCGCTCAGGTGACTTAGAAA with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.70,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //