Array 1 3716-5268 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJGTA010000232.1 Limosilactobacillus reuteri strain O_Tuki_6_1 scaffold232, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 3716 36 100.0 30 .................................... TAAACACGGGTTGCCCATCATTGCTGACGG 3782 36 100.0 30 .................................... AGCCATTGCCACCCAGCTCCTTTACGTTTT 3848 36 100.0 30 .................................... CTGTCATAAGAAGACTTGTCTGGGTCAAAG 3914 36 100.0 30 .................................... CCACAAAAGTAATTAATGGTATTCCCAAAG 3980 36 100.0 31 .................................... TTTAACCTAACAGTTACCACACCAAGTGACG 4047 36 100.0 30 .................................... TGATAATATTATCATAATCAAATTCTTGCA 4113 36 100.0 30 .................................... TAAAAAGCGTTAAATTGCGGGCAATTGCAT 4179 36 100.0 30 .................................... TACGCTCATGGCTAACCCCTGCTTATATTC 4245 36 100.0 30 .................................... ACTAAAGTGTTTCCAAGCTTGGCTACAGGA 4311 36 100.0 30 .................................... AAACACACCAATGAATATCTGTTAGAGCGG 4377 36 100.0 30 .................................... TAAAGAGTGGTAACGCTATGCAGTCTGCTA 4443 36 100.0 28 .................................... AACGCGCGCAAAACCGTAGTAACGCAGA 4507 36 100.0 30 .................................... TGCTACTATGAAGAAAATTCGGAACTTGGC 4573 36 100.0 30 .................................... TGCTGTTAATCCCGTGGATGGGGATGCTAG 4639 36 100.0 30 .................................... AAGATATTGATATTTATAACGAATTATTAA 4705 36 100.0 30 .................................... TCTACCGGCGGATGACGATTGTTGAGCCTT 4771 36 100.0 30 .................................... TTTTCAAGGTGGGAAATCATGGGTGGAAAG 4837 36 100.0 30 .................................... GATCAAATTAACAATGCAGTACGTTCTATT 4903 36 100.0 30 .................................... TCTCGATGACAGTGGTTAATTCCCTCGTTA 4969 36 100.0 30 .................................... CTAACTAACTCGCTCAAAGCAACAGTTGAG 5035 36 100.0 30 .................................... TTGGTAATTCAATGGCATACGGATGTTACT 5101 36 100.0 30 .................................... TCAAAAGCTTCGTCGGTAGCCTTCTCATCG 5167 36 100.0 30 .................................... AAAGCAATCAATGAAAACAGAATACAATAT 5233 36 91.7 0 ........................G...A......T | ========== ====== ====== ====== ==================================== =============================== ================== 24 36 99.7 30 GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Left flank : GAATAATAATTTAGCAACAATTTATTCAACGGAAATTGTAAAGTCAATAATAAAAAATTTAACAGAAGAGGATCGTCATTTACTAGATGCTGAAGCACGTCGACTTTATTCGAATGTTCAAGAAATTTTATTTATGACAGATTTACCGCTCGAAGTTCGCTATGATGGTGATATCAAACGATTATTAAATTATTGTAAGATTAAATTTTCACCATTAGTTCAGCAAAGTCCTTATGATATAATAAAAACAGATTTAAAGTTACATTTAGAATGTGCTGATAGTTCATGTGTTGGGTTAAGTAATGTCGCTAATTACCTAGATTCAGCTCAATTTAACGAACTACAACAACTAAACATTGAATTGAAAATTCCTGTTTTATTAATAGAATTCACAGAAATAGATAATCGTAGATACTATGGAAATGCGAATTTTTATTATATTGACAGGGATTTCGTTGATTGGAAGTTATAAACTATTAATTCAAAATTAGAAAATAATG # Right flank : TAAATATTAGTCGAACTCACGGCTGAGAAAAATCTTAAATATGCTTCAAATTTCCCCGCCAACTTCAGCGGGGCTTTTTCATTTTCTTTTCAAATTAGTGTATAATATTTACTAAACCCATTACTAAAAGAGGTGAAAAATAATGGCAACAATTAAAGAAATTGCGAAAAAGTCAGGGTACTCACCAGCAACGGTTTCGCGCCTTTTGAATAATGACCAAAATTTATCGATCAGTCCAAGCACCCGCAACAAGATCATGACGGTGGCTACCGAGCTTGGCTATTGGAACAGCCACAAGAAAAACTCTCAGCAGCAACCAATTCGTCCTAATCTTGCTCTATTGTATCGGGTAAGCGGTAAAGAACAACTGCAAGATGAATATTTTGCGTTTTTACGCAATGCAATTATTAAAGAAGTCGATGAGGTGGGAGCACAGGTTGAGATCTTTAGTAATATCAAAGATTTAATTGCGACGGCTGATTCGTTCCAAGGATTTATTG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //