Array 1 139332-137260 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADAJG010000013.1 Enterobacter roggenkampii strain Res13-Abat-PEA24-P1-02 seq_tig15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 139331 28 100.0 32 ............................ CTGCTTGACGCTCTGCACATCCTGGTCAATCT 139271 28 100.0 32 ............................ GTGTCCTGGACATCATCGCCACGATGACAAAC 139211 28 100.0 33 ............................ CACCAAATCCCGTATTAATTCCACATAATCTAT 139150 28 100.0 32 ............................ TGAAACAGTATCGCGTATGTCATAACCCGTAT 139090 28 100.0 32 ............................ TGCTGGCGCAGACAACTGCGGAATTAAATAAT 139030 28 100.0 32 ............................ TCTCTGATTTCACCGCTCAAAGTGAAAAAGCA 138970 28 100.0 32 ............................ GTGGCGGCTTCCGAATTTAACGGGGTCTTAAC 138910 28 100.0 32 ............................ TTGCCTCTGCTAATGCTGTTCGTGCTAATTAT 138850 28 100.0 32 ............................ GGCATCAGCAATTACGCCATGGTAGTCATCAG 138790 28 100.0 32 ............................ TTGCTCAACCAGATTAAGGGCGAGCTGGCTGG 138730 28 100.0 33 ............................ TTCATCCAACAGGCGCAGGATAAGCTCAACCAG 138669 28 100.0 32 ............................ GCCAGCGGTCGGATAATTGAGCTGGCCAGACT 138609 28 100.0 32 ............................ AACCAGAACCAATACCACCAAGATCCACCAGT 138549 28 100.0 32 ............................ AACCAGAACCAATACCACCAAGATCCACCAGT 138489 28 100.0 32 ............................ AGTTCCACCTCCGTAACAGCTGATGAATTGAT 138429 28 100.0 33 ............................ ACAAAGAAGGGGTGTTGTGCTGGAAGCGATCAA 138368 28 100.0 32 ............................ GCGTGGCCATCCACGGATCATTCAAAGAGAAC 138308 28 100.0 32 ............................ TCAGGCATATTACAAATATGCACTCTATCTAT 138248 28 100.0 32 ............................ ATTAGAATATTTCAAACGAGGGAATTTCCCCG 138188 28 100.0 32 ............................ GCCTCCAGCTCCGTGACGTTGTGCTCACGCAT 138128 28 100.0 32 ............................ GTCATCAGGGCGTTCGCTGTGTCCTGCAATGC 138068 28 100.0 32 ............................ GAAATAGGGTCGGCCACGGCGGCCTGTCGCGC 138008 28 100.0 32 ............................ CGGAAGTTGATCAGTATCTTGCAAGCGTGGGT 137948 28 100.0 32 ............................ CACGCTATCGAGGCGATCCATGGGTACCGGTC 137888 28 100.0 32 ............................ AGCTTGTGGCGCAGCATTACCCACAATATGCC 137828 28 100.0 32 ............................ TGGGTAACTCCTCCGAAGCAGGGATCCGCCAG 137768 28 100.0 32 ............................ ATCTTGATCAATGCCTCAGTAAAAACTACTGT 137708 28 100.0 32 ............................ CAAACTCCGCAATTTGTTTTTCTGTCAATGGG 137648 28 100.0 33 ............................ ATAACATTAAGAGATGTTCCGGCAGCAGTACCG 137587 28 100.0 32 ............................ ACCAGCCGCGCTTCACCAGCATCGGCTCCAGC 137527 28 100.0 32 ............................ GTACTCGATACCCTCAAAACCGAATTTAAGCT 137467 28 96.4 32 ....T....................... GTATTCGATACCCTCAAAACCGAATTTAAGCT 137407 28 96.4 32 ....T....................... GCTGGAATCAAAGTGATGGAGTGAGTATAAGG 137347 28 85.7 31 A..........C...C......C..... ATAGAAAATAAGGCCTAACAGTCCTCGGACC C [137322] 137287 28 75.0 0 ........T..A....A....CCT...G | ========== ====== ====== ====== ============================ ================================= ================== 35 28 98.7 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AACGGGCCACGCGTTCGCTCTCGTCGGGCGTTAACGTCCGTCCCGCGCTTTTGCGGCGGGCCACGTTACGTTCGTTGATACCCGTGACACGCAAAATGTCCGCTTTCGACATGGACGTCCACTCGTGGATGTTGTCGAGCACACTGACGGGTAATCCCTGATTGAGAAATTCAATCAACCGCATACCTCGGTTGGCGGGTAAACCGGCGTAACGCCAAAGTGCGTTATCAGCAGGTTTCTGTGCGGGGATCCATGTTCTCATGTCACCTCCTGAGTAATGTCATTTGTCATGGGTAAGTATAGCCATTTGTCATGGTGGATGGAATCGGTGTTTTTGTGAGGGGGATTGATGCGAAGAAAGGTGTTTTGACCCTAATTTTTGGCGTTTGTGTAATTTATTGATTTTAAATGAGTATTCTTGGTGGGTAAAAAAGAGGGTTAGAGAGGGTTTTTTAGCTTTTTTTGTATGCAAATCAGAAGGGTGTGGGGATATTATTTCA # Right flank : CTGGAACGAACGGCTAATTAATTGTTCAAATAATCAACTGCGACACAAAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTGAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACGGAAAGCGCATTCGTAAAGGGGATACAACA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 149880-148828 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADAJG010000013.1 Enterobacter roggenkampii strain Res13-Abat-PEA24-P1-02 seq_tig15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 149879 28 100.0 32 ............................ TACCGTATCAAGCACCAGCGCACCGTCGGCAT 149819 28 100.0 32 ............................ TGAATATTGTTCACGCGCGTCCTGATGCCGCT 149759 28 100.0 32 ............................ GATAAATCTGCTGAACAATTCGGGGTTCACGC 149699 28 100.0 32 ............................ TCGTTAAGCAGCTGCATGGCGTTCGGCATGTC 149639 28 100.0 32 ............................ GAAAAACTTCCAGCCTGAGAACGTCTACAACA 149579 28 100.0 32 ............................ GAGCAGAAGCTACGCGCTAAAGCCCTTGCGCA 149519 28 100.0 32 ............................ ATTGTCGCAGGCTTTTCTTTTGAGTCGGCTGC 149459 28 100.0 32 ............................ AGACTACGGATGCGCCAAAGAAATCCGAAGAC 149399 28 100.0 32 ............................ GTCACTCCCCGAACTGATTACACAAATCCGCA 149339 28 100.0 33 ............................ AGGGAACTGGCGTAAACGTCCAGACGTCGGTGT 149278 28 96.4 32 ..G......................... GTCTGGGTTCGCGCCTGACCGCCGTAGCTAAG 149218 28 100.0 33 ............................ GACAATTTTGCGACTGTAGACGTCCTGCCAGAA 149157 28 100.0 32 ............................ TTAACTATTGCACTCTGCAGCTGCGTCTGTTG 149097 28 100.0 34 ............................ GCCGCACGAAAGCGAAGCTGGCCAGCCTGCAAAA 149035 28 96.4 32 ...............T............ TGGCGCCTCCGTGCCGGTGGCGCTCCGCGCTT 148975 28 100.0 32 ............................ CGCACTTATGGCGAGTGGTAAAGATTGAAAGG 148915 28 89.3 32 .........T.....A....G....... AATGAGCAACATCGACAAACAGGCGCTACACA 148855 28 78.6 0 ...........C.........AC.ACT. | ========== ====== ====== ====== ============================ ================================== ================== 18 28 97.8 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CACTCCCACAAACGCAGCCCGTATGTCGTTGCCTCGGGGCTTATCTGGAAGAGGTAAAATCCGGCCTCACAGAATCCATGCGTGATTTTCAGATAGTGGAATTTGAGGACGAATCGGAACCACCGCAACAAAAGGAATGGCTGCTGGAAGATACAAAAACAAAGTGTGACTACTGTCGGGCGTTAAACCATGTACTAATGGTGTCGCAGTTTGACCGCGATATGCTGCCGCACCTGACGGGGTTGCTGCATGACATTACGCATTCAATGGCCGCGGATGTCGTTGCGCCTCAACGTGCAGAAACGATAGTTCACATTATTTCCTGAATGTAATTCGTAGTGTCGGGGAAAGACTACTGACGCCACTGGCTTGACCTTTTTTTGATGATTACGTAACCTTTTGATTTATATAATGCGAATTTACGTTCCAGAAAAAAGGGTTTTATGCGGGAAAGTTGATTATTTTCTTTTCTAACAATAAGATGGCGTGGTTTCCTTTCA # Right flank : AAAACAACTCTCTAAAACATTCAGCTTACCTATTTAAAACTTAATACGATCAAACCCACATTCTTTATTTTCCGCAATAAATAAAAAATTCATTCACATACCAATTATATTCCAATGAATATATTGTTCGTAAAAATAATGCATTAAATGGAAAAGTGATTTTTCACTTTATTATCACGGTAATTACTCTTCATTTGATACCCGTCACATTTGTTTTCATCTTATCTTCGATAACATACCGCGCATTCAACACCTTGAAATAAAAGCCCTTGCTATGTCCGTAAACAGCATCACTCCAACAGACTTAAAAACCATCCTGCATTCAAAACGCGCCAATATTTATTACCTGGAAAAATGTCGCATCCAGGTGAATGGTGGGCGTGTTGAATATGTCACCCAGGAAGGCAAGGAGTCGTTTTACTGGAATATTCCCATCGCGAATACCACGGCAGTGATGCTGGGAATGGGAACATCCGTTACACAAATGGCAATGCGGGAGT # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 165190-164741 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADAJG010000013.1 Enterobacter roggenkampii strain Res13-Abat-PEA24-P1-02 seq_tig15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 165189 28 100.0 32 ............................ ATGTTGTTTTGTGCCGTCTGCCCGAACGTGTT 165129 28 100.0 32 ............................ TTACAACGTGATCGCATGGCGCAGAGTGACCG 165069 28 100.0 33 ............................ TAAACATGCGGCCATCGTCGTCAGCGCGCTTTA 165008 28 100.0 32 ............................ AGTCCATCCCGCACAACCCACCGCGCCACGTT 164948 28 100.0 32 ............................ CCGACGCAGCAACGCCTGGAACCCTGGCTGAG 164888 28 100.0 32 ............................ GGTCGCTGGAAGACACAACCTGTTCAGCTGGC 164828 28 100.0 32 ............................ TTAAGAGGCGTATTGGCCACCCGGTCGCAGAG 164768 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 8 28 100.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ATGGGTTGCATAAGCTGTTTGGTGGGGTGGGCTTTATCAGCGGTATGCTGGTGGAGAAAGGGCTGCCGGGGTTTATTGCCTACGGCGTGTTGATTGGCGAAGTGGTGGCGCCGATCCTGATTATTGTCGGGCTCTTTACGCGCCCGGCCGCGCTGGTGCTGGCGTTTACGATGATCGTGGCGTGGCTGATGGTGGGATTGGATGAGACATTCGCGCTCGACAAGGTCGGGGCATGGGCGATTGAAAGCCTGGTGTACTTCTTTATCGGCTCGCTGGCGGTGGCGTTTTTAGGGGCAGGGCGGTTTGCGCTGGGGAAAACACCTGCGTGGCGGTAGGGGTTGGAATCTGTTCCGAGGGAAGGGGTCTACGGACCCTTTTTTATTGGTGAGTTTTAAGTTGTTGATTTCACAACGGTGAATTGTTGGTGGGGAAAAAAGGGTTTACGGAGAATTTTAGGGGGATTTCTTTATATCACAAGAAGATAGGTGTAGATTGTTCCA # Right flank : GCACTTCAGCCGGGTAAGCGTCGGTGGTTAGGGTCCAATGCCGAACAGGCAGTAGGCACAACGTAGGCCGGGTAAACGCAGTGCCACCCGGCAAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACGAACGAGCGTTTATTGTTTATGCAAGGACCAGATCGCCCTGCGGATGGCACGAGCATGCCAGCACGTAACCCTCGGCAATCTCCGCGTCGGACAGCGTCATGGTGCTGGTGACGGTATACTCCCCGGAAACCACCTTTGTTTTACAGCAGCCGCACACCCCGGCACGGCAGGCCGCCGCCACCGGCACGTTGTTGCTTTCCAGCGCCTCCAGCAGCGTCGTGCCCACGCGGCCAAAGAAGGTCTGCGCAGGCTGCAGTTTGGTGAACTGAATCCCGCTGGTTGCCGCTTCCGCCACCGGCGTGAAGAACTGCTCTTTGAAGAAGCGGGTCACGCCGAGCGCTTTCACCTCTTTCTCGACGATATCCATGTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [40.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //