Array 1 10511-9742 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_BCWL01000017.1 Bergeriella denitrificans NBRC 102155, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	====================================	=====================================	==================
     10510	    35	  75.0	    37	.....G.A.TGG.G.-..G......G..........	GGGATTCCGCACCGATTGATAACTGATAAGTTATATT	G [10499]
     10437	    36	 100.0	    30	....................................	TTCTAGAAAAGTTTGATGTTGACGCAAATT       	
     10371	    36	 100.0	    30	....................................	TATAAATCAATCAAATTTGTAGGACCGAAA       	
     10305	    36	 100.0	    30	....................................	AGCGATAACTTTGGCATCTACGCTTTCATT       	
     10239	    36	 100.0	    30	....................................	GCCCCAGCTTAAGCAGGCATCCGGCCATTC       	
     10173	    36	 100.0	    30	....................................	ATACGGAAGCAGTAGCTGTCCGGTTTTAAA       	
     10107	    36	 100.0	    30	....................................	GTCGACAACAGGGTTTGGCAGACCAAAAAG       	
     10041	    36	 100.0	    30	....................................	CCCTGATATCAACTTGTTTTCGGAGTGATA       	
      9975	    36	 100.0	    30	....................................	TGCCGCGAAGTGTGATAGCCCGCTGACCAA       	
      9909	    36	 100.0	    30	....................................	CAAAGCGGAGCGGGAGCGTGCCGAAATCAT       	
      9843	    36	 100.0	    30	....................................	GCACGCCCATAACGTAGTATCTTGCGATTA       	
      9777	    36	 100.0	     0	....................................	|                                    	
==========	======	======	======	====================================	=====================================	==================
        12	    36	  97.9	    31	GTTGTAGCTCCCTCTCTCATCTCGTAGTGCTACAAT	                                     	       

# Left flank :   ACTCGGCTTAATCGGCTGGCTCTCCGACTACCTGCAAGCCGGTATTTCAGGCATGGGCTTAGGCTGGCAAGGCGGCTGCGCCCTTCTGATGCTGGCCTACCTCTACGCACACTACGTCTTCGCCAGCGGCACGGCGCACGTTACCGCCATGTTCGGCGCATTCTACGGCGCAGGCTTGGCCTTGGGCGCCCCGCCCATGCTGTTTGCCCTGATGATGGCTGCCGCCACCGGCATCATGATGTCGCTGACCCACTACGCATCAGGCTCTTCCCCCGTGATTTACGGCTCGGGTTTCGTCACCATGACCGAATGGTGGAAAGCCGGCTTCATCATGAGCGTTTTAGAACTCCTGATTTTCGCCACCATCGGCCTGGCCTGGTGGAAGGTATTGGGCCATTGGTAAACCCGCATTGGGTTGCAGAAACCGCATAAAGCAGAAAAAGCCGTCTGAAAAACAAGCGATTTTCAGACGGCTTTTTTGTAGGCGGATTGCGTAGATT
# Right flank :  ACCCAAGCCGGGAACCCTTATAAAACAAGGGTTCCCGGCTTTATTTCTGCCTAAAATTCCGTTTTAAAACAGCAAAAGCTGGTCGGCGTTGACCTTTTTTTCGCGCGTTTTCGGCTCGCCGATCAGCATCACCATACCCGCATACTGCTTTTCCGTTACCTCCAAATAACGAACCTGACCCTCTTCGGGCAGCTGTTGCAGCAGCCTTTTGTGGTGTTTCTGCAACGCATCGCGCCCGCGAACGATACGCGAATACACCGACAATTGCAGCATCTGGTAGCCGTCTTTCTGCAAAAACTTACGGAATTGGTTGGCCGCCTTGCGTTTGGCGGCGGTGGTAACGGGCAGGTCGAAAAAGACGATTAAGCGCATAAATTTGGCCTCATTCATAATCATGCTCTTTCAAAGGCAGCATTTGCGGCAGTTTCAGCAGCTTGGGATTGTTTTCGATTAATGCCGTCTGAAAAGACTGTATGGTGCGGTCGATGGCGGCCAACAGG

# Questionable array : NO	 Score: 6.16
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTAGCTCCCTCTCTCATCTCGTAGTGCTACAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:52.78%AT]
# 	Reference repeat match prediction:         R [matched GTTGTAGTTCCCTCTCTCATTTCGCAGTGCTACAAT with 92% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-0.50,-0.40] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-10] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [53.3-55.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.41,4.5   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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