Array 1 7867-5988 **** Predicted by CRISPRDetect 2.4 *** >NZ_SDQJ01000017.1 Macrococcus caseolyticus strain DPC7171 NODE_17_length_47717_cov_71.0227, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 7866 36 100.0 30 .................................... TTTCATGTGCTACCCTCCTATTGTTAGTTT 7800 36 100.0 29 .................................... CTCTTATACCACTTATAAAACTCTTCCTT 7735 36 100.0 30 .................................... AATCTTGCTAGTAACTCTGCTCGTCTTTTA 7669 36 100.0 30 .................................... AAAGTTTTTCCCACGAATTGACCACTTAAC 7603 36 100.0 29 .................................... ATTCTTAAAGTGTTTGCCGTACGCACATA 7538 36 100.0 29 .................................... TTATTAACCCAGCTTGTCTTACGCTTAGG 7473 36 100.0 29 .................................... TTATTTTACACTTAGTGTAGTGGTATCAA 7408 36 100.0 30 .................................... AAGAAAAGTATTATAAATTCTTCAACTGGT 7342 36 100.0 30 .................................... AAAAAAAGATGAGAATAAAACGTTGAAAAT 7276 36 100.0 30 .................................... AATCAGTTCTCTTAAAAACCCTGTATCAAC 7210 36 100.0 30 .................................... GTCTTTTTAGGGGTTCGCACCACGCCCCCG 7144 36 100.0 30 .................................... TGTAATAGTCTTATCTCCGACTATTAGCTT 7078 36 100.0 29 .................................... TCTCGAAAACGACTAAATTGGTCTGCTAC 7013 36 100.0 30 .................................... TCGCCCTTCTCGTAAGAGTTATTGCGAAAT 6947 36 100.0 30 .................................... TGAAAGTGGAGTACCAAAGACTGATAAATA 6881 36 100.0 30 .................................... ACGACAAATTAATCACTCCTGGATTCACTA 6815 36 100.0 30 .................................... CAGAAGTGACGTAAGCAAAGGAATGCTAGA 6749 36 100.0 30 .................................... TAATTTTGAAACACATCACATTGAAATTAT 6683 36 100.0 30 .................................... TACAATCAATCAAATTGTTATAGACTTAAG 6617 36 100.0 30 .................................... GGAACGGTAGGGTGGTTAACGTTTAAATTG 6551 36 100.0 29 .................................... ACCGAATAATGTAATCTCGTAAACAACAT 6486 36 97.2 30 ...................................T TAGTGTATAAACGATTCAGAGTTGCTTGTA 6420 36 100.0 31 .................................... GGTTTTTTCAAAGACAAAGTAGCTCACTCTT 6353 36 100.0 30 .................................... AACAAGGGACAGGAAAAACAAGAACAGCGC 6287 36 100.0 30 .................................... CATACCATGTGCATTGTCCCCATGGATATG 6221 36 100.0 30 .................................... AGTGATAAATAAAAAGAATCCCTAAATTAA 6155 36 100.0 30 .................................... AGCTAACTCTTCTGACTCTACCACTGTTAT 6089 36 100.0 30 .................................... GATATGCTTCTGCCGTTCCTTTATTTACTA 6023 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 29 36 99.9 30 GTTTTAGAACTATGATCTTTTAGAATGAAGTGAAAC # Left flank : TTTTTAAAATAGATGTTCATAATGATTTTAGTCATTTAAGTGCAATACAGACGAGGAAAGCATGTATTGATTTGATGAAGGAGGAGAAAAAAGAAAATATTCTTTTTCTGTTGTTTCCTGAAGCAAATCTAGGTATAAGGGACGTTAAATCCTTTATGGATTTAATTAAGAATTATGGAATGACAACGATTATGGTTACAAATCATCCTTATTTTATGGTAGAAGCCGATTCTTTGGCTATGAGCAAGCATAATATGACTTTGTTTGATATTAATCAGGTTAGAGACGAATTTCGATTAATGTTCCCAAACGAAGAGATAGATGAGAGCATTGTGAGACAAATAGCTATTAATGAATTTTCTCGACAATACTTTATTAAAGATGAGCGCTATATCAGATTTATAAATGAGTACTAGTCGTGTATAATAAATAATAACTATAAAAAATGTTTCATTATCACCATAAAGAGTAGTTTATGCCGCATAACTTCGTGTTTTGAG # Right flank : ATGTGTTCTTCTATAATCTTTATAATTAGAATACACTCATATTCCTCACACCTATTATTAGGATAGTTGACAAATTCTTCGGTTTCATGATAGAAAAGGATAGCTAAGAGCATTTATTCTTTTATTAAATATTCTTGTTGCTTCCAGTATCGGGTTAGTGATATTTTTCGGTACATTAATATTTGGTCCATAGCAGAAAGGTGGAGCCCCATGAATTTACGTTCAGGTTTATTAATTTTCTTTTTTATGATGTTCGTTCTATTAACTATCTATAACATTTATACAGAGATAATGAGTGATAATATTGCTGATTCATTAGGTGGATTTTATAGCTTATCAGTGCCGATGCTGGCTTTAGCATTTTATCCTGATTCAATAGATAAATCTTCTCGAAGTGTCCGAGTGTTTGTATATAGATTATTGATATTTGTTTACGCTGTTGTATTATTTAGTTTTATGATTAAATACCATGCGTCGTGGTTCTTATTATTCTTTGAAGG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAACTATGATCTTTTAGAATGAAGTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //