Array 1 58413-57636 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAAISO010000019.1 [Clostridium] scindens strain MSK.1.26 NODE_19_length_63027_cov_267.315, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	=================================	=====================================	==================
     58412	    33	 100.0	    37	.................................	TGGCTTTGGTTTCTCTTCTGGCTTAAGTTTCTCTTTC	
     58342	    33	 100.0	    34	.................................	GCAATATTGATTTTGGTACTGGTCGGAAAATTGA   	
     58275	    33	 100.0	    33	.................................	ACTTCCATTATGCTGGCAGCGTAGACTCTTTCC    	
     58209	    33	 100.0	    34	.................................	ATGCCTGATCCAGCAGCAGGCGGCTTATATCGAG   	
     58142	    33	 100.0	    34	.................................	TTCTGCAAATTCAATCTTATCAACCTTGAGGGAG   	
     58075	    33	 100.0	    34	.................................	ATATACGGCGACATCGGCATTGGAGACATGTACC   	
     58008	    33	 100.0	    36	.................................	GGCTCATATACAGGGTTCCAATTCTGCGCGTCAGAA 	
     57939	    33	 100.0	    35	.................................	TTTTTGGAAACATTTTGCCAGAATTGACAATTCTA  	
     57871	    33	 100.0	    34	.................................	ATGTCTATATAGACCCATCTGCCGCGGGACTTGC   	
     57804	    33	 100.0	    36	.................................	ATACAACCGTTGTATATCTGCGATATACGCATATAG 	
     57735	    33	 100.0	    34	.................................	AGAAATCTGATTGTTTTTCGTAACAGTTACCACC   	
     57668	    33	 100.0	     0	.................................	|                                    	
==========	======	======	======	=================================	=====================================	==================
        12	    33	 100.0	    35	GTCGTTCCCTGCAATGGGAACGTGGATTGAAAT	                                     	       

# Left flank :   CAAGTTAGGTCTTAACTATGTATCTTGCTCACCATTCCGCGTGCCGATCGCAAGACTGGCTGCAGCACAGGCTGCAATCGCAGAAAAGAATGCATAATTAAATCACAAGTTATTTTGACGCAGGGGCAGTATGCCTCTGCGTCTTTTGAATATTGTTAGAAAGATTTTCTTACTATAGCCAACAAGAATTAAGGGTGGTGGAATAGTATGTCTAAAGGAGTTCGAGACGGCAGTCCTTCTTATCATTAAAACTTTATGAAAAAGCTAATTGAGAAATTAGAAATATAAAAAAAGAATAAATTTCTTTGAAAATTAGATATCGATTCAGTAGTGCGAATGTGAAGCGTACATAAAAATCCCAGGATATTCGCACCAAAAAAGTTGCACAAAAATATTGTATTGTATTACAATATAGATTAGATGAGAGAATGTATCTAAAGGTAACTGTAATATAGCACAAAAATTTTGCAGTTATATATTAAAAATTGGATAAGTTTGCT
# Right flank :  ATTCCACGGCTGTGAGCAGCCATACTGCCAATGCGTTGTTCCCATGCGGGAACTTGGATTGAAATTAAAGCATAGCCAGTAATGTTGCAAAGTCAAATGCGTCGTTCCCCACATGGGAACGCAGGTTGGATTATTACCATAGTAGATATAGGCGCTCCTGTACAAGGTTGATCCACTTGGGAGAATTCGAATATCGATACCTCTTAATGGGCATAATGGCTTGACTACATCGTCCTTTAGAGTATGAAAGACATATTTTGAATCGAAAATCAGCCTTTTACCGCAAAAAAAGCAAGGCCTATTTTTTAAAACAAACCATACTACGAAGTTATTAAGAATTAATCAATATGTTTATGCTATATTTATACAATTAAAGGGAAATAAAATGGATTTTAAGCAGAAATGCGTAAAGATTTATAAGTTTTTATTATATAAAGCAAATGCCTATAGTTCAGGGCGGCGGAGATTTTTCTCCACCGCCCTGATTACAATACCAAGCC

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGTTCCCTGCAATGGGAACGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:51.52%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-5.30,-6.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [46.7-76.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.14   Confidence: HIGH] 

# Array family : NA
//