Array 1 13199-14875 **** Predicted by CRISPRDetect 2.4 *** >NZ_ALJV01000097.1 Paenibacillus polymyxa strain WLY78 S6_contig00098, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 13199 30 100.0 37 .............................. CGTTTTAGTTGGTAGTTGGTGGGTGGTGGGTGGTTGC 13266 30 100.0 36 .............................. CTCCCTGTCCTCACCCTCCGTCTGAACGAAAACCAG 13332 30 100.0 36 .............................. CAGTTTACCGGACTGAGAGAATACCTTCCTAATCGA 13398 30 100.0 36 .............................. TGTGGTGTCCGCATCTGGAGACAAGAGCGAACAAGA 13464 30 100.0 36 .............................. CTGTATAAAGGATTTCCTTCTGTGATCCATACTCTT 13530 30 100.0 36 .............................. TTTTCCTATCCTCCTTTCTCACTGTAAACAATTGTA 13596 30 100.0 37 .............................. TCGCTCAAAGCAGGCATATTTGTATCGACCGTATCGC 13663 30 100.0 35 .............................. ACATTCGCGGAGCTTGGGCAGTGCAAAGGTAAAAC 13728 30 100.0 36 .............................. TATGTATTTTTATAGCCAACTACTTGACCTTTACCA 13794 30 100.0 36 .............................. TATTGTTCAAACGCAACACCATGCATAAATTATTTG 13860 30 100.0 35 .............................. ACGCACATTGTTCGCTCGATGTCGGAAAGTCTGTT 13925 30 100.0 36 .............................. AAAAATGTCCAGGAGGATCTAAGTATCTGGCCGATC 13991 30 100.0 36 .............................. GGTACTGGATCGGCTGCAAGGTCTGGACGCTTGGAA 14057 30 100.0 36 .............................. TCATGACGATTATTGCGGTAATCGTTGCGGCCATGG 14123 29 96.7 37 ......................-....... CCAGGTATTCCCCCGCAGGTGCATCTGTGACAACGGA 14189 30 100.0 35 .............................. TTGCCTGAGAACACCACACCCGTATTGCCTGACCC 14254 30 100.0 35 .............................. CTTTGAGCAAAGAGGTTCCTTTGACATGAATAGAG 14319 30 100.0 36 .............................. TACGCTTGACGCCCTCCCGCTGTCGAGAAGTCTGTG 14385 30 100.0 36 .............................. ATCTTTCAAGTGTTTGCGCCCGTGTTTCGTATTTGT 14451 30 100.0 38 .............................. CGGAAAATCTGCGTGAAAGCTTCGTGTAAAACGTCCGC 14519 30 100.0 35 .............................. GTATTTTCACCCATCTTAGCTGTTCATCAATTCTA 14584 30 100.0 36 .............................. TTTTGGACAGATTCGAACCCGGTAAGGCAGTATTAT 14650 30 100.0 34 .............................. ACATGTATAAACTTCCTCCTTATATTTAGGAAAA 14714 30 100.0 36 .............................. AAGGCTGGGTTGAGGCGTAAGCCAGTACCTACGATG 14780 30 100.0 36 .............................. AGGAGTGACACGGCTTCACCCGCTTTCGGGTTAGCT 14846 30 90.0 0 ................GA...........A | ========== ====== ====== ====== ============================== ====================================== ================== 26 30 99.5 36 CTTTAACCACAACATGTGATGTATTGAAAT # Left flank : GTATCCTTCCTTAGTGAGTGCTTTAAGTAGCATTTCGGCAATGGATAGATCGTCTTCAATAAGTAAAATATGCTGTGGCATAGGTGTGGAACACCCCTAATTTTTAGATTAAGCTCGTGTGACGAACTGTACCTGAATTATATAGAGCAGTGGAGGGGATTTCCATAAAAAATATCCAAAGAATTTGAATAGGGGAATTTTCGAAGGAGGGTTAAAGGGCTGTTTTTCCCGATGCATTGGCTTTATTTCAAGAATGAATTCCACGGTGTACATCCAATGATGTTCCTAATAAATTAAGGTATTTCATTAAGCGTTGGAGGTGATTTTTTCCCAACCTCTTAAAAGGGTGAGACGTGGAATTTCTTAGAGGTGCAAGGGTTTTAGACGTTTTTTTCTACAATTTGAGGGGAGGGGTCTACGGTTGGGAAAAAATTGCGAAACCCTAGTGGCTGTAGTAAAATAAGCACATTATTAAAACTGAAAAGCTTGATTCTACTAGC # Right flank : ATACTCGGCCTCGTTTCTGCAAAAGTGCTTTTTCGATGCTCAACGATCAAAATTATTTAGTTTCATCCTTCCATGAACTCCATTCTTTTTTATTGAAAAAACCTCCTAAGCCACTTAAAGTGGTCAGGAGGTTTTTGACATTTGCATGCATTTGGGTTTTAGAATACTTTTTAAATCTCAAATTTTGAAAGCATGATTTATATAAAGGACTTCAGAAAATCACAATTACAATGTAGCTCATAGCCATTAGTAAGAATATTTCCGAACAAAAAGTAAAAGAAACATCGGAGGTTATGGTCATAGTCTAGTTTCAGTATTTTAAAACTAGAAATATAAATTTAAATACACAAGTGTTTTATTCATTATGCGCATTATTTTTTTTAGATGCATTTACATTATACTCTTAAGTAAGCGATCTCAACATAGACCAAAGGTCTATGTTTTTCCCAACCTTATAAGAGCTAGAAAGAGGTAACTCCTTAGATCACCAAGGGATACAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAACCACAACATGTGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.00,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 2 15490-16958 **** Predicted by CRISPRDetect 2.4 *** >NZ_ALJV01000097.1 Paenibacillus polymyxa strain WLY78 S6_contig00098, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 15490 30 100.0 35 .............................. GCAGCACTACCGGATTCTCTCGTATAAGCTCCGTC 15555 30 100.0 36 .............................. GAATATCCTCGTTTACGTTAGCAGTTGTCATTTTAA 15621 30 100.0 36 .............................. ATCTTTTAACGTTGGCTCTCCGATCCCCACGATCAG 15687 30 100.0 35 .............................. GACGAAATTTTCATATGCCTAGCTGTAACAACCAT 15752 30 100.0 36 .............................. ACCATCATGTCCGCATCCTCCGGCAACTCCTCGGTA 15818 30 100.0 35 .............................. GAACTGCACTCTGTAACTGTGTAACACACGATTGA 15883 30 100.0 37 .............................. ATGAAAATAAGCCATCAAAAACCAATGCCAAAATCGT 15950 30 100.0 35 .............................. CACGCTCGAAAACGTCGTAATGCTCTCCTCGGAAC 16015 30 100.0 36 .............................. AAACCCGGCTCCAAGCCACCTGATCTTTGCCGCAGT 16081 30 100.0 36 .............................. TCGGCATACAAAGTGTCTCCTGCAAGAAATACATAG 16147 30 100.0 36 .............................. CTTCTAAAACTAACTTACTAATATCGACACTCTTCA 16213 30 100.0 37 .............................. GCATATATAGACCCTCGGGGGGAACCTTCATCCATAA 16280 30 100.0 36 .............................. ATACCTCGACGCTTCCCGGTCCCTCTGGATCAGCTC 16346 30 100.0 36 .............................. AAGTAACTGCGGATCTCTTCCACGCTGTACCCCTGC 16412 30 100.0 37 .............................. GGTGTGAATGTAACTTTGTTTATGATGCCATCAGCTC 16479 30 96.7 36 ...........................G.. TTTGTTCAAATGAAGGCAATACTATTTCAGAAACGA 16545 30 100.0 36 .............................. TCAACATTTTTATGTTGTTCCTGATCTTTGTTGTGT 16611 30 100.0 36 .............................. TGAATTCAGGTACAGCAGGATCGTTTATATTAAAGT 16677 30 96.7 34 ..................G........... TACGTTTGTCCATCTACATGCATAGGCCGTGGAA 16741 30 100.0 35 .............................. TGCTATTGTCAATGCCACAGGTAGCGCACAGCATG 16806 30 96.7 31 .............................A TATGAAGCTGGCGTTAGGAGCTGTTTAAATT 16867 30 100.0 33 .............................. TGGGTTGCAGTCAGCGCTTGAATCGTAGACATT 16930 29 90.0 0 ...A............-.......C..... | ========== ====== ====== ====== ============================== ===================================== ================== 23 30 99.1 36 CTTTAACCACAACATGTGATGTATTGAAAT # Left flank : TAAAGTGGTCAGGAGGTTTTTGACATTTGCATGCATTTGGGTTTTAGAATACTTTTTAAATCTCAAATTTTGAAAGCATGATTTATATAAAGGACTTCAGAAAATCACAATTACAATGTAGCTCATAGCCATTAGTAAGAATATTTCCGAACAAAAAGTAAAAGAAACATCGGAGGTTATGGTCATAGTCTAGTTTCAGTATTTTAAAACTAGAAATATAAATTTAAATACACAAGTGTTTTATTCATTATGCGCATTATTTTTTTTAGATGCATTTACATTATACTCTTAAGTAAGCGATCTCAACATAGACCAAAGGTCTATGTTTTTCCCAACCTTATAAGAGCTAGAAAGAGGTAACTCCTTAGATCACCAAGGGATACAGCTATTTTTCTTAGCACTTGGCAAGAAGCGACCTACGGTTGGGAAAGAATTGCGAAACCCTTGTGGCTGTAGTAAAATAACGACATTGCGATTTTGGAAAGCTTGATTTTACTAGC # Right flank : TAAGAAATTGTACGTGTCATTTATTTTGGTTGCTATCCTTCAATTTCGTACTGAGTCCTAAGCAGTAGGGAAGAATTGTTCTGGAGAAGCGTAAGCGTCTATCTTTATTCCGATTTTAATCCTCGAAGGGTTTATACAATCCAGAAAATCCAGAAAATCCGCGGATAACAGCGACCGGAAGGACAATCTGCACGTGTAGCAATTTAAATACCGTTGCATTTTATTATAAAAATATAATTATAATGAGAAATATATTTACAAATCATGGAGCGAGGTCTATACTTTATATCAGATCAGGAGGTGTACGTATTGTATTATGAAATTCACATAACAACGTTAATTAAACAATCATCTCACCATCTGGAGATACCGGAGCGTATCGGAGCCTGGATTGGTCGGGCTGGGTTGAAGGACGAAGCGTTGAAGCAGACGCACTACGACAAGGACTACAAGCACTATACATTTGGGTCGCCTTTTCCGCGTGAAAAGGAGGGGGTATA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAACCACAACATGTGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.00,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 3 26657-27740 **** Predicted by CRISPRDetect 2.4 *** >NZ_ALJV01000097.1 Paenibacillus polymyxa strain WLY78 S6_contig00098, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 26657 30 100.0 36 .............................. GTTTCTGGAGTGATGTCTTTCCGTTCATATGGATTA 26723 30 100.0 36 .............................. CGGCATTTGATCCAATGGCCCCGATGATGGCAACCG 26789 30 100.0 36 .............................. GCTTTTAAATACAATGCCTTTGGGCCGTGACCAGCG 26855 30 100.0 36 .............................. CCTCATAACCGTAGCAGCCAGGAGAACGGTCGCGCC 26921 30 100.0 36 .............................. TCATGCTAGATACCGTCTCGTCTCCGAACTGATTCG 26987 30 100.0 37 .............................. GTCGGATGTAACAGCAACGGTGAATCCGGTGCCGCAA 27054 30 100.0 36 .............................. TTTCATAAGCCACGAACATGGATTTATCCCCTATCA 27120 30 100.0 35 .............................. GAGTATTGCCAAAAGTCCCAACGTGACCAACCAGA 27185 30 100.0 35 .............................. CGCATTTGGTGCGAATATCAGGCAAAGATTTTGAA 27250 30 100.0 35 .............................. GTAAATAATTTTCGGAGTGGCAAGCGGTATAATAA 27315 30 100.0 36 .............................. GATATTGAAAGCTTACAGTGCCAGCGGTGGCAAGAT 27381 30 100.0 35 .............................. GTAAATAATTTTCGGAGTGGCAAGCGGTATAATAA 27446 30 100.0 36 .............................. GATATTGAAAGCTTACAGTGCCAGCGGTGGCAAGAT 27512 30 100.0 37 .............................. GTAAGTTCTCCTGTGTCAGTGTCTTTTAAGTAAACAC 27579 30 100.0 37 .............................. TCCATCACCCTCACAAGCACCTGATTTTTACACTCAA 27646 30 100.0 36 .............................. GTGCTCGCTTGAATCGGATGCCCTTCAAGCACGTAG 27712 29 83.3 0 ..............-.A..A.....C...A | ========== ====== ====== ====== ============================== ===================================== ================== 17 30 99.0 36 CTTTAACCACAACATGGGATGTATTGAAAT # Left flank : TACCTTTTGTTCCCTTTTTGGAAAAGGAAAAGAGGTAAAGGATATGGCGAAAAATTATAACTATGTCATTCTGGTGTATGACATCGGAGAAAAGCGAGTGGGTAAGGTATTTAAAATATGTAAAAAGTATCTCGTTCATTTTCAGAAATCCGTATTTCGAGGTGAAATTACCCCTGCTAATTTAATTCAGCTACGCGCTGAGTTAAAAAAGGTTATTGATGAAGGGAACGACTTTGTTGCCGTTTTTAAGATGACAGGTGATTATGTTTTCGACGAGGAAATCATCGGTGCCCGCATGAATGATTCGGAGTCCTTATTGCTGTAATTTTCCCAACCGCCCTAAAGAGGAGGAAAGCATTTAACCTTACAGCGCCAAGGGTTTGAAAGGATTTGTCAATTGTTTTTAACAAACCCTCTTCGGTTGGGAAAATTTTGTGAAACCCTTGCGGCTGTAGTAGTATAGGCATAATAGCATTTGTAAGAACGTTGATTTTACTAGC # Right flank : ATACTCTTAACCTGAAGGCACTATAGTAATTTCATCTCCACTCCTAACAGAAGATGTGATCAAATTACTGGCAGCTGCTAGCCCCTATATTATACTGAAAGATTTTATAATCTGATGTTTGGAATACGGTATTATAATATCCGGGGCATGCCTTATTATGAGAGATTAGGTATGTCGAATCACGCTGCGGTACAGGAGCGTCAATAAAGGAGAGCAACGATGTTTGTCATACGAGGAACACAAAAACTGCTGAAGGAATGGGAGACTGAACCACTTCAAGTTGATATTTATCCGCCTTTAAATAGTTGGCATGCCAGCTTATTTTTACTGAATCGAAGAAAAAATATAGTGTTTATGCATGATATATCCCGCTTAAGCATCACGCTGTTTGGGATTAAAAAATCGCAGTACAAAAACCTGCCGACTCTTTTTATACAAGCCTTGAAGGAATTAATGATCAGCGAAGGGTTTGATGAGCAGATCGTGAAGGCATACACACA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAACCACAACATGGGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.40,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA //