Array 1 85552-82656 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUIH01000002.1 Clostridium sp. AM43-3BH AM43-3BH.Scaf2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 85551 28 100.0 33 ............................ TGAACTCTGCATGAATCTCCTTATCATTGCTTG 85490 28 100.0 33 ............................ CTGATTCCAAGTTGGAGGGTTGCCTCCATAGTT 85429 28 100.0 33 ............................ CCATCTCTTTGTCCTCGTCTGACAGATATAATG 85368 28 100.0 33 ............................ CTGCTCTGTTGCCTTGTCAGTGTTCCAGTCATT 85307 28 100.0 33 ............................ CGTAAAACAATCTGGGTCACTGGTACAAATTTA 85246 28 100.0 33 ............................ TTGTTGTTCAGATTTATTTCCAATATCTAATAA 85185 28 100.0 33 ............................ CAGCGTTTACCAAGGCAGCGCTATGGGAGCAAT 85124 28 100.0 33 ............................ CGTTGGAAATCGTTAGAATCCATGTAAACCAGC 85063 28 100.0 33 ............................ TATGCCTGTAACTTGCCGCGATAATGTTGTATA 85002 28 100.0 33 ............................ CGAACGCGTCATGCTATTCCAGACACGCTGTTG 84941 28 100.0 33 ............................ CCAGGTGCAGTGGGACAATGACGCTTTTTTATG 84880 28 100.0 33 ............................ CTAGCCGATTGTGTCGGGCGTTTAAAATCATAC 84819 28 100.0 33 ............................ TTGAATTGTACGAACCGGATGGTTGGATAAACA 84758 28 100.0 33 ............................ TCGGTAGCAGCAACGTTCCCATCAGCAATTTTG 84697 28 100.0 33 ............................ CGTATCCGGAGACTATACTATTAATGCTGGAGA 84636 28 100.0 33 ............................ TAAAATCATGTCGGGCGTGGCGTTTAATGAAAA 84575 28 100.0 33 ............................ TTCGTCCGCAATGGATTTTTTAACAAATGTTTC 84514 28 100.0 33 ............................ TAGGTATGAGCGGATTGTATTCTTCGGTACAGC 84453 28 100.0 33 ............................ AGCGTCCCTGTCGTATAAGACCCCGACGACCTG 84392 28 100.0 34 ............................ TTTTATTATCTGATGAAAATTACTGGATGGTAAT 84330 28 100.0 33 ............................ CCATATCTACATGATATGATACATATAAAGTTG 84269 28 100.0 33 ............................ CTATCAGTATCAGCAAATGCGAGCAAATTGAGG 84208 28 100.0 33 ............................ CGAACATCCTCAAACAACGTTACGGGACATTTG 84147 28 100.0 33 ............................ CTGTCTTCCTTGCCGCCACCTGCGAAGATAACA 84086 28 100.0 33 ............................ TGTATGAGGCATTGCGGAAAGTCCTTGGAAATG 84025 28 100.0 33 ............................ TACGGATGCTTCGGCGTAATCTTAAATTTAAGA 83964 28 100.0 33 ............................ CTGAGTAACCGCTTTCTCCGCCGCCACCAACCT 83903 28 100.0 33 ............................ CCGGCAGATGCTTATCCCAAGAGGAGAAGAGAA 83842 28 100.0 33 ............................ CCGGCAGATGCTTATCCCAAGAGGAGAAGAGAA 83781 28 100.0 33 ............................ CCGGCAGATGCTTATCCCAAGAGGAGAAGAGAA 83720 28 100.0 33 ............................ TAGGGCGCTTGTTGTGTTTCACACCGCAAACGT 83659 28 100.0 33 ............................ CTGTTGGGGTAAAGCTGGCAAGTAGAAGGGAGG 83598 28 100.0 33 ............................ CGTCACACCGAACCAGCTTAACATTACTGACGG 83537 28 100.0 33 ............................ CCTCCGGCACTTTTGCCCCCTCAAATTTGACGG 83476 28 100.0 33 ............................ CTATTGCATTTAAAATGTCAATAGATTCATGAT 83415 28 100.0 33 ............................ TTGAGAAGCGCCCCGAAATCATCGGACTTAAGG 83354 28 100.0 33 ............................ TTTCATCGGAGAAAAGAATTACATAGTAACCAC 83293 28 100.0 33 ............................ TAATAATTCAGCTGAATTACTTATTGGATAACA 83232 28 100.0 33 ............................ CCTTATCTTTAACCTGTCCTGATTCAATGGCTT 83171 28 100.0 33 ............................ TCAAGGTATCCGGAGCAGTTTGACCTAGTGGGA 83110 28 100.0 33 ............................ TCACATCATCGCGAGTTATAATCCGTAGCGCAT 83049 28 100.0 33 ............................ CGGTCGCGGAGGATGTTGGTTGGAAACGGGTTG 82988 28 100.0 33 ............................ TCTGGAGGAAGAGGCAGCAAAGAGGGCGCTGGA 82927 28 100.0 33 ............................ TCATCTGGCCGAGATGGAAAAGTACAGCTGGAA 82866 28 100.0 33 ............................ TTGTTGCTTTTACCATTGCATCCTCCTGTATCC 82805 28 100.0 33 ............................ TACCGGTACAATCAGCGGAACCGGAAGTCTGCC 82744 28 100.0 33 ............................ CGAAAAACCGGAATGGTTGACGATGGATCAGAT 82683 28 85.7 0 ............T...........T.TT | ========== ====== ====== ====== ============================ ================================== ================== 48 28 99.7 33 GTATTCCCCGCGCAAGCGGGGGTGATCC # Left flank : TCATCAGATGAGATTATTGAGTTGGCGGCGATCAGAATCATTAACCACAAAATAGCAGACCAATTGGAGATTCTAGTGAAAGCAGAAAAAGGTGTTCCAAAAGTAATTACTGAACTTACGGGGATTACAGAGGAGATTCTTGAGGAAAAGGGGATGGTTCTTTCTTCAGCGATAGAGAAGTTTTGTGAATTTATTGGACAAAGTACAATAGTGGGTCATAACATCGCATTTGATCGCAGCTTTTTAAAGGAAGCTTGTCGAAAGACCAATCGTATGAATCTAAAAAATCCGGCAAAAGATACATTAGATCTTGCGAGAAGACGAATCGATGATATTGATGATTATAAGCTGCATGCACTAGCAGACTATTTCCAGATAAAAGTTGAGGAGGAACATAGGGCATTAAGTGATTGCATCACAACATTTCAGGTGTTTGAGAAACTAAATGAAATTTAGAGATGGAGATCGGGAAAAGGTTGTAAATAAGGGATTTTTTTAGT # Right flank : TCCTAAAATCTAAAGTTTGGGAAGATAAGAACAACCTTATGATTTCAACATATGAAGCCATAAGGTTGTTTTTTTCGTATAGAAAACTTCACTGCCGCATCTTGAAGGTCACCAGAATTTGTGGGAAATGATAGGTGGTTGTTTGCTCAGTTTTTTGGAATATAGATGATTTTGTCACAGGCGTAAAGTTCTTCTCCCTCTCTGTTTCGCATTTCATATCCGATATATTTACAATTCCCATCCAACTGACTATAATAAAGAATGTCCGTTTGCCTGCAAAGGCGCGGAACCATATCCATCTGCATCAGGGCGATATGACAGAAAAATGAATTTAAAAGAATGGAAGAAACAACAATGGATGTAATTGGAAAATTTGGAAATAGGGTGAGCAGCCAGGCGCTTAAGGATCCGGAAAAAGCGCGTCGGCTGCTTCTTGCGGGATACCGCCTGCAGGAAAAGAAGCTTCAGTTTTTGCCGGATCGGGGGCTGCCGTCGTCGGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCGCGCAAGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGTTCCCCGCGCAGGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.20,-13.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //