Array 1 158219-159049 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JADOZL010000003.1 Enterococcus faecium strain 1001287H_170206_E11 NODE_3_length_231386_cov_90.7297, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    158219	    36	 100.0	    30	....................................	CCTGAAGCTAGAAAAAAGCTTCGTAGAAAG	
    158285	    36	 100.0	    30	....................................	TGCCATGCTTTTTGCTTGTCAATATGTTGT	
    158351	    36	 100.0	    30	....................................	ATTCAATAGCGGAAATCAATTTCATGGTGT	
    158417	    36	 100.0	    30	....................................	GAAGTTTCAGGATATTGAACTGTACAGTGT	
    158483	    36	 100.0	    30	....................................	GATTGAAGCGCTACCTCTGCTACTCGATGC	
    158549	    36	 100.0	    30	....................................	ATGTAGAGGCTTATATATAGGGATATTGTA	
    158615	    36	 100.0	    30	....................................	ATAGCTGCTTAAGAGCATAAAGAAAGCACA	
    158681	    36	 100.0	    30	....................................	TTGCTTAATAATTGTCATCGTCGCTGTAGA	
    158747	    36	 100.0	    30	....................................	CGTAGAGTTAACTGCTACCTCTCATACCAC	
    158813	    36	 100.0	    30	....................................	AATTGCTGTTACTGATTTACCTACATACTC	
    158879	    36	 100.0	    30	....................................	CGACCAGCTGTATCTAACGAGCGGTCGTTT	
    158945	    36	 100.0	    30	....................................	AAAGGAGCAATTGAAAAAGGAAACGGCGCG	
    159011	    36	  91.7	     0	.........................A....T....A	|                             	AC,G [159039,159045]
==========	======	======	======	====================================	==============================	==================
        13	    36	  99.4	    30	GTTTTAGAGCTATGCTGATTTGAATGCTTCCAAAAC	                              	       

# Left flank :   GCCAGCTCAATGAAAAAGTAGAAGTGAAATCAATGATTGATAAACTGACAGCGACAATCAGTGAGCTGATCGGGTACGAGTTGTTGGATCACGAACTCGATTTAGAAGGAGACGAGATCACGGTCTTGGAATTATTCAAAGCATTGGGTATCAAGATCGAGACAAGAAGTGATACTATTTTTGAGAAATTACTTGAGTTGCTTCAGGTTTATAAATACTTGTCTAAGAAAAAATTATTGGTTTTGATCAATGTGTGTTCCTATCTCACGGAAGAAGAAATAAGCGAAGTGCAAGATTATATTTCGTTATATCATATGGAAGTGCTATTTGTAGAGCCGCGTTCGATCAAAGGGATAAAACAATTTGTCTTGGATAAAGACTATTTCTTGAACTTGGAAAACATGGTATAATGGTAAAAAAGAGAAGCGTTCAAAGCTGAAGTTTTGCTATGAACGAGTAGCGTGATTATGAAACATTGACGGAAAAATTTTTTCTGCGAG
# Right flank :  AACAGCCTTGCACTTATCGAAAGAGGATTAGTGTCAAGGGTGTTTTTCATATGAGTGGACGGAATTATCTGTTTTCTTTTACAATTGATAATAGATACTTTGCTGTATAGTCAGTAGCTGATATAAAAGTATCGGCTCTTAAATGGAAAAAAGATAGGTGGCGACGCAATGTTTAACACACAATTGATCGGTTATTTAGAATGGATCATTGCTATTTTAAATATTTGTTCTATCGGTATCTTAATTGCTGGGATCGTTCTTGTTCTATTCAAACTTTTTGATTGGTCTCATGTCAAGAAAAACTATGCAGAACGTAATGCTCGTAATGCAGATACAAGAAAACTGTTAGCAAGTTATATTTTGTTAAGCTTGGAAGTACTAGTCGTTGCTGATATCATCGAGTCAGTTATCAAGCCGACTTGGACAGATATTTTGAAGCTTGCACTTATTATTATCATTCGAACAGTCATTTCTTATTTCTTGAATCAGGAAATAGAAGA

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTATGCTGATTTGAATGCTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:63.89%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGCTATGCTGATTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-2.20,-0.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [63.3-60.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//