Array 1 142745-143243 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR027601.1 Bacilliculturomica massiliensis strain Marseille-P3303, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 142745 33 97.0 34 T................................ ACGTTTTGGGTCAAATGCTCTGAGTCGGGCAAAA 142812 33 100.0 34 ................................. TGGGTGAAGACAGCAGAGACGGGAAAGACTCTTT 142879 33 97.0 32 ......A.......................... AATTACAGATCTTAATTTTCCATTTTTCAAAA 142944 33 97.0 34 G................................ TGTGCGACGGCGACGATCTGACCGGCTACCGTCT 143011 33 100.0 33 ................................. TTGCTTCATCCTCTGTCCATGTTTGGTTATAAT 143077 33 97.0 35 T................................ TGACAGAACGGCGTCTCTCAAACTCTCCATACTGC 143145 33 93.9 34 .......................A....A.... TCCCTGCGGCCCCGCCGGGCCGGTCTGCCTTCAT 143212 32 72.7 0 TTG........AGA.........-A.A...... | ========== ====== ====== ====== ================================= =================================== ================== 8 33 94.3 34 CGTCAGGCTCCGTGAGAGCCTGTGGATTGAAAT # Left flank : TACAGCAGGAATCGGCTAATGAAGTTGGAATCTAGCCTTTCACATCAGTAGAGGTTTATCACTACTGATGATCAAATATATTTTTGTGGCTTTTAGATGTCTGCATTACAAAACGGTTACTTTATGTTGTATCGTCTGTACAGATTCTGTTGTAAGCTAAGATTTGGGGAGCTGTCTTGACTTGGGATAGGTGTTCCGATATAGTTAAGTCAGGTGATGAATGGGGCTTCATAAGAATGGATCATAGTTACAATGATTGGGAATGCAGAAAAGACGGAAAGGCAACAAGGATCATCAGAGCTAAGTGGTGGATCGTTTCAAAATGAACTAAAGGTATTAGCGGTGCGAACGTGAAGCAAACATAAAATCGCTGGGAGATTCGCACCTAAAAAATTTTATTTTTATGTAAGATATTGGTTTGAGGCTGGTATGCGATGAGATGAGGACCGTAGGAATTTTGGTGGTATTGCCCGCGGGGAAACGGTTTTCTTGCGTTTTGC # Right flank : TTCCTCAGTGTTTGCTGCAATTTTTGTCATTATCTGATTCGCAATCGCATTCTCAGGCATATTCCTACTAAAAATTTAAGGGTTTATGGAAACTTTTGTGGTATAAAGCAAAAGAATGCTATATAATGTATCTAAGGTCCTAATGCGTCCCATTTATGGTAAAGGAAGCGATTCCCCCGTGGGGCTGAAGGCGGTCTACATAAAGCTGACCGCGGGAATACCTTAAGGGACCGAACAGCCATGATGGTCTGTCATGGGTCTGTTCTTCAAATACGACCTCCAATTTTTTCCTATATCGTTGACTGACAAACGGATGTACATTTGGAATTGCAAATACCAATTCTATTTTAAGTGATCATAGGGAGCAGACTCTTAATATTTCCGTTTTGCTGGCAGATTCCAATGGTTCATTGGGAAAAAGGGCAGTGCTGACTGGTTTTTTGCGCCCCCCGCGGGCCATCAGCCGGCCTTCGCCCTGTAAAATTTGTCTTTGAAACTGT # Questionable array : NO Score: 8.44 # Score Detail : 1:0, 2:3, 3:3, 4:0.71, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.47, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGTCAGGCTCCGTGAGAGCCTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GGTCAGGCTCGTAAGAGCCTGTGGATCGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.00,-5.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,1.01 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 611127-611638 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR027603.1 Bacilliculturomica massiliensis strain Marseille-P3303, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 611127 33 100.0 36 ................................. TTCGAGCACACATAAAAAATTTCGCGCCACGCCATG 611196 33 100.0 36 ................................. GCATTTGAAAAAACCGCAGACCCCGCCACGGCTAAC 611265 33 100.0 36 ................................. TAGTCCATCGTTACTCAGGCTACCTCTGTCAGAAGC 611334 33 100.0 34 ................................. TCCGACGGAATAAATTCTTCATCTTCCAGCCCTT 611401 33 100.0 37 ................................. ATGATGTCGTCGAATATATTAGTAGCTTGATGACGAA 611471 33 100.0 33 ................................. GCTAATAAGCTTAGCGAGGCAACATAGACCATC 611537 33 97.0 36 .........................G....... TAAGGCTGACTCAGCAAGATTTCGCAGATAAACTGG 611606 33 93.9 0 ..T......................G....... | ========== ====== ====== ====== ================================= ===================================== ================== 8 33 98.9 36 GTCGCAGCCTGTGAGGGCTGCGTGGATTGAAAT # Left flank : ATTGGAGCATCTTCAGCCGGAGGGAGACGGTTCCGTTTGATCAGGCCGCCGGAACGCAGCAGATATTACACAGACTTGGCTCGTGCCGCGGTCTCCTGAACTGACAGTCGATGCGCTTGTTGATTTCCATTTATCAATCAAAAACTCCACAACAACTTGACACGACCCGTAAAACAGCACTGTTTGACTTATAACGCAGGACAAAGTAAAATAGACGTATAGAAAGTGAATAGGAAGCGTGAAATGCCTTATGAGAATGTTGCTTTTGTTTTGCGCATAGGAAGCAGGATGAAGCGCTGAAATCGTATGGCATCTTCACAAACCAAATCAGGATTAGCAGCAGTGCGAATGGGAAGCTCACATAAAAATCCCGGGGCATTCGCACCTGAAATGGGAGATATAAAAGCAGTTGAACGGTCGTAGTGCTAAAAATATTGTGAAAGAAGAGAAGAAATAGTTGGGAAATTGGATATCTGCAGGAATCATTGCGGATATTTGCT # Right flank : TCGTCATAAACATTATTCTCTTTGGGGATTCCAGCTCAGGCGCTATGAAAATAATGGGAAAAATATTCTACTTTGATTTTATTTCCTTACAGATCCGGAGTTTAACGAAGCGCTAAAGAAAATAGCGGGGCGGATCGATCTAAGCAAGATCAATAATCTAATTGAAGAAATACCTATAATTGATCTATTACAAAAGGATTTTTTAAGGTGATGATACAGGAACAGAAGGAAAAAAATCATTGATTACAGCAGGAATCCGCTAATGAAGCTGGAAGCTAGTCTTTCACATACGAAGTGATTTATCACTACCGATGATCCAATATATTTTGTGGCTTTTAGATGTCTGCATCACAGAACGATTACTTTATGTTGGATCGTCTGTACAGATTCTATTACAAGCTAAGATTTAGAGAACCGGCTTGACCTAGAATAGGTGTTCCGATATAGTTAAATCAGGCGATGAATGGGGCTTGATAAAAATGGATCATAGTTACAATGAC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAGCCTGTGAGGGCTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.50,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : NA // Array 2 612383-614008 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR027603.1 Bacilliculturomica massiliensis strain Marseille-P3303, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 612383 32 100.0 34 ................................ ACCTTTTCTTCTGCCGAACAATAGCGATTGTAAT 612449 32 100.0 35 ................................ ATTACAAGACGCAAAATAATTAATGTCATTAAGCC 612516 32 100.0 34 ................................ ACCATCGCCGTATTCTCGCCCGGCTTGATATCAA 612582 32 100.0 33 ................................ CAAATTTCTCGATTGCAGTATCTGCAAAGTCCT 612647 32 100.0 36 ................................ CGTCTGTATAGCAGTCACCCGTGCCATATCCGGGCT 612715 32 100.0 34 ................................ GGATCACCCTGTATCCGGTGGTGGTCCTGCAGTG 612781 32 100.0 33 ................................ AAGAGATCTTTGGAGCTGCGCCAATTCATCGTC 612846 32 100.0 33 ................................ CGTCTGTTTGGCTGACAGGGGGCCGCCGCCTCG 612911 32 100.0 36 ................................ AGCATACCAATCGGATCCAGGGCAGGCCGCCGACCG 612979 32 100.0 34 ................................ CGCACGGTGTTGTCATAGCTCCCGGAATACACAT 613045 32 100.0 33 ................................ GCAGTATAGCGCGCCAGATCACAGGTTAAGCAT 613110 32 100.0 33 ................................ GCGGCGGGGGAAAACGGCACGTTGCATATACGG 613175 32 100.0 33 ................................ AGGAATTATCGGAGTTTTATCTGGCAAATCCGG 613240 32 100.0 35 ................................ AAGGAAGAACAGAAAGAAACGACCGTTATAGTAAA 613307 32 100.0 33 ................................ TACTGGCTAATGTTGCCGTCTTTCTAAATGCAA 613372 32 96.9 34 .............A.................. ACGGACCAGGTGCGGAAATTAGAGACGACGGACC 613438 32 96.9 36 .............A.................. AAAATCACATTTGCTGTCCCGCCGTTTGTCGAATGC 613506 32 96.9 36 .............A.................. GAGATACGCCGGGACGACCGGGACTACCAGGTAGGT 613574 32 96.9 35 .............A.................. TGTGTGGGTGAATGAAAAGTTTTTACGAAACTTTG 613641 32 96.9 35 .............C.................. AAGCGTGCCCAGAGGTTTTTTACGATGGCTCGAAA 613708 32 93.8 35 ...G.........C.................. TGCGGCGTCGGCCGTGGCAGGAGTAGGCTCTGCGG 613775 32 96.9 35 .............A.................. TCGTACCAACACATCAAGAGGCGCTTCGCAAAGGA 613842 32 100.0 35 ................................ GCATCCAATAGGTACGGTCTCCAGATTCAGCCAAG 613909 32 100.0 36 ................................ CAAACCCTCTCGGAGCTTGCACATCTGCAGATTGTC 613977 32 84.4 0 ......T...A.AA.........A........ | ========== ====== ====== ====== ================================ ==================================== ================== 25 32 98.4 34 GTCAGGCTCCGTGTGAGCCTGTGGATTGAAAT # Left flank : ACAGCAGGAATCCGCTAATGAAGCTGGAAGCTAGTCTTTCACATACGAAGTGATTTATCACTACCGATGATCCAATATATTTTGTGGCTTTTAGATGTCTGCATCACAGAACGATTACTTTATGTTGGATCGTCTGTACAGATTCTATTACAAGCTAAGATTTAGAGAACCGGCTTGACCTAGAATAGGTGTTCCGATATAGTTAAATCAGGCGATGAATGGGGCTTGATAAAAATGGATCATAGTTACAATGACTGGGAATGCAGAAAAGACAGAAAGGCAAACAAGGATCATCAGCGACAAGTGGTGAATTGTTTCAAAATGAACAAAAGGTATTAGCAGTGCGAATGTGAAGCGAACATAAAATCTCTGGGAGATTCGCACCTGAAAAATTTTATTTTTATGTAAGATATTGTTTCGAAGCTGGCATGCGATGAGATGAGGGGCGTAGGAATTTCGGTGGTATTGCTCGCGGGGAAACATTTTTCTTGCATTTTGCA # Right flank : TAACCTGCCACTCTGCGTAATACATACCACGCCTTGTCGCCGCCTGCAATGGCTGCGCAACTCAAAATAACTCTTTTTCCGTTGTAAATACCAACCTGTCGGCAGTCGCCGCCCCCAAAGTCTGCGAACCGTAGACAAAAATTCCATGCGAAGGAATGCGCGTCTCTCGATGGACAGGTCTTACTTTTCATAGTCTTCACGGCTGTGCAGACCGGGACGGTGTGCGCTGGAGTTCAGGTGAGAATACAAGGCGATAAGATGACAGTGGAGTAATAGATCGTAAAAGAAAGGAAAACAGACACAATGACTGGTGAGGTGCTGAAGGGAAGAAACGGATATGACATTCCGTGCATACATACGTTGACGGGCAGTGAAAAGATGGTGGCCATTGTCGTACATGGGTTTGGAAGCAGCAAGGAGAGCCCCACGGCGGCCATGCTGGGAGCTGAGTTCCCTCACAGGGGGATCGGCACCTTTGCTTTTGACTTCCCGGCCCACGG # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:0, 3:3, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGGCTCCGTGTGAGCCTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.80,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : NA // Array 3 638452-638687 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR027603.1 Bacilliculturomica massiliensis strain Marseille-P3303, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 638452 33 100.0 35 ................................. ATCTCCTGTTTGAGCTGTTGGGTACAAAACGGGAG 638520 33 100.0 35 ................................. ACGCTGCTCGGTACGGTCTCAGATACCTGTAGCCC 638588 33 97.0 34 ...........T..................... ATGGTGAGGTAGGCAAGGTCATAATTACCATTAT 638655 33 84.8 0 .C.......A.......A...AC.......... | ========== ====== ====== ====== ================================= =================================== ================== 4 33 95.5 35 GTCGGGCTCCGCATGGGGCCCGTGGATTGAAAT # Left flank : TGAAATCCGTGAGAAAGGTGGAACGAAATGTTCGTACTGATTACATACGACGTTTGTACAGAAGACGCCGCGGGCAGGAAACGACTGCGCCATGTGGCTAAGCAGTGTACAAATTATGGGCAGCGTGTACAGAACTCCGTATTTGAATGCGTCATCGATCCAGCGTTGTTCAAAGAACTCCAATATAAACTAGAAAATATTATTGACGAGGAAAAAGACAGCCTGCGATATTATTTCCTGGGGAAAAACTATCAGTCGAAGGTCGAACATGTAGGCGCAAAACCATCCTTCGATGTGGAAGGTATTTTGATTGTCTGATTTGAAAAAACGTTGGATCATCTGGTGCGAATGTCAAGCTCACATAAAAACCCCGGGAGATTCGCACCTGAATTCAGCCCATAGTATCCTGTTTTTTACATGAAGAGAGATGAAATATGTGTAAACGCAATATAAATAAGGGATAATGTCAAGATCGACAGGAATTATTCTTTGTTTTTGCT # Right flank : TCGGCATAAACACTATTCTCTTTGGGGATTCCAGCTCGGCGCTATGAGGATAATGGGAAAAATATCCTACTTTGATTTTATTTCATCCTTACAGATCCGGAGTGTAACGAAGCGCTAAAGAAAATATCAGGGCGGATCGATCTAGGCGAGATCGATAATCTAATTGAAGAAATACCTGTGATCGATCAATTACAAAAGGATTTTTACAAGGTGATGATAAAGGAACGGAAGGAAATAATCATTGATTACAGCAGGAATCGGCTAACGAAGCTGGAACCTAGTTTTTCACATCGGTAGTGGTTTATCACTACCGATGATCCAATATATTTTTGTGGCTTTTAGATGTCTGCATCACAGAACGATTACTTATGTTGGATCGTCTGTACAGATTCTATTGCAAGATAAGATTTAGAGAACCGGCTTGACCTGGAATGGATGTTCCGATATAGTTAAGTCAGGCGATGAATGGGGCTTGATAAGAATGGATCATAGTTCCAATG # Questionable array : NO Score: 5.64 # Score Detail : 1:0, 2:0, 3:3, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGGCTCCGCATGGGGCCCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.00,-3.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : NA // Array 4 639433-640661 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR027603.1 Bacilliculturomica massiliensis strain Marseille-P3303, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 639433 32 100.0 33 ................................ TGTCGGCTGAAGACGGTGGACACACGAGTTCAG 639498 32 100.0 35 ................................ AAATCCCCTTGATAATGATGTGATTAACGGTAATT 639565 32 100.0 35 ................................ CACATATCCATGACCCAGTAAACGCCGGTCATAAA 639632 32 100.0 37 ................................ TTTTTTGTGTCTGTCACCCAGTACATCTTTGCAGAAA 639701 32 100.0 36 ................................ AAGGCATTTGTGCAACGGCTCAATTATCACTGGGGT 639769 32 100.0 34 ................................ GGTGTGCTGAACTGGATGGTCTTAAGTGGTCCTG 639835 32 100.0 35 ................................ TGTGCAAACATCTGCCGGTTATACGGCACGTCTAC 639902 32 100.0 33 ................................ ATTGTCAACGACGCGGACCGGTCAAAACTCCTG 639967 32 100.0 34 ................................ CATTGCGTCGGGCGGAAAGGGCGGAAAGGTCATT 640033 32 96.9 33 ..T............................. GGAGCAGCGAGGAAGAGAGGTCTGATATGGGAG 640098 32 100.0 35 ................................ TGTGCAAACATCTGCCGGTTATACGGCACGTCTAC 640165 32 100.0 35 ................................ GGCGTAAGCACGTGTCGCGCTGAAGGTCTCGCCGT 640232 32 100.0 33 ................................ ACGTTTAATCTCTGTGTCATAACTTTTCACCCC 640297 32 100.0 33 ................................ TGTGCGACGGCGACGATCTGACCGGCTACCGTC 640362 32 96.9 36 .............A.................. CACGATGCTTCCAAGCTCCGTGACGGAGTACCAAAC 640430 32 96.9 34 .............A.................. GTGGACAGTATGATATGGTTGCTCAACGAAGGAT 640496 32 96.9 35 .............A.................. GCTAGCACCATCCAGCGGCCAGTAAATATTCTCCG 640563 32 96.9 34 .............A.................. ATGGTGAGGTAAGCAAGTTCATAATTACCATTAT 640629 32 78.1 0 ...G.....G.AA..G...C.C.......... | G [640643] ========== ====== ====== ====== ================================ ===================================== ================== 19 32 98.0 34 GTCAGGCTCCGTGTGAGCCTGTGGATTGAAAT # Left flank : TACAGCAGGAATCGGCTAACGAAGCTGGAACCTAGTTTTTCACATCGGTAGTGGTTTATCACTACCGATGATCCAATATATTTTTGTGGCTTTTAGATGTCTGCATCACAGAACGATTACTTATGTTGGATCGTCTGTACAGATTCTATTGCAAGATAAGATTTAGAGAACCGGCTTGACCTGGAATGGATGTTCCGATATAGTTAAGTCAGGCGATGAATGGGGCTTGATAAGAATGGATCATAGTTCCAATGATTGGAAATGTATAAAGACGGAAAGGCAAACAAGGATCATCAGCGCCAAGTGGTGGATTGTTTTAAAATGAACAAAAGGTATTAGCGGTGCGAATGTGAAGCGAACATAAAATCTCTGGAAGATTCGCACCTAAAAAATTTTATTTTTATGTAAGATATTGTTTTGAAGCTGGCATGCGATGAGATGAGGACCGTAGGAATTCCGGTGGTATTGCTCGCGGGGAAACATTTTTCTTGCATTTTGCT # Right flank : TGTCCATAATTATGCTGACGGGTACGGGAAGACGAGCCGGGCTCCGAACGGGGCCCGCAGGTTGAAATCCCGCGTTAAGTGTGTCGCACCATTCCACTTTTATATCAGGTCCCGCATATGACCCGCAGATTGATCCCTTACAGCCCCAATCAAAAAAGTTGAAATAACAGTTCCGGATGACTTCCCGTCATGCATGAAACCCCGCTGCCATCCCAGCCATCCACTGCCTGAGCCGGCGGAGTCCTGTCAGGGTTGCTGCTGCCTGCATTCCCAACTTTGTCTTACCTGCGGTCACCTCGGAGGCCAGGTCTTCAGGTCCGGCCGAACTCCGATCAAGATTGCCGGAATCATCTCTACGGTTTGGTTCGTCCTTGGCGAAAGGAGTCACAGTCAACACTGCAGAGCTACGCCGGAGCCCTGTGTGAAGAATCCATGAAATTTTAAAAACATAATTGCATAGTACAACAAAAAGAAGTATGATTAGTAAGTCGATTAATTAT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:0, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGGCTCCGTGTGAGCCTGTGGATTGAAAT # Alternate repeat : GTCAGGCTCCGTGAGAGCCTGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.80,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : NA //