Array 1 1994975-1996937 **** Predicted by CRISPRDetect 2.4 *** >NC_011963.1 Cereibacter sphaeroides KD131 chromosome 1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 1994975 32 100.0 39 ................................ ACGTCAACGTCAACTTTGATGGCGTCTGAGATCGATCCG 1995046 32 100.0 35 ................................ AAGGCCATGCCGAGAGATGACCAGCGCGCCTTCAT 1995113 32 100.0 36 ................................ GGGCTGATCTCGACCCCGGGCGGGATCACCGGAACG 1995181 32 100.0 33 ................................ CATGTGCAGGGCGAACGCGGTGACGCCCCACGC 1995246 32 100.0 34 ................................ CGCCCGGCGGCGTTGTAGAGCGCGCCGACGCCGC 1995312 32 100.0 36 ................................ CCCCTCGTCGCCCGCCGGGTGGACGTCGACAAGATG 1995380 32 100.0 35 ................................ CGTGGCGGGAGCGCGCATCAACCCACGTGGGGCGT 1995447 32 100.0 35 ................................ ATCAGGCGGATGTTGGTCAGCATGTCCTCGATGGC 1995514 32 100.0 36 ................................ ACGCACAAGGAATGGCCTGGCGACGAGGCGAAGCCG 1995582 32 100.0 36 ................................ TGAAGATGCATGATGACTGAGGAGAAAACGACCATG 1995650 32 100.0 33 ................................ GTCACCGATGGCCCCATGGGCCGTGTCGCCCGG 1995715 32 100.0 33 ................................ CGTGGTCTACGAGGCGCCCCTCGATCCGCGCTG 1995780 32 100.0 33 ................................ TCGGCCACCGGCGAGACGATCACATTCCCGATG 1995845 32 100.0 35 ................................ TCATCGGATCTCTTCCTGATGCCGCGAAAAGCCAC 1995912 32 100.0 35 ................................ CCAATCGTCCACGCCCAGCGCCCAGGCCAGCCACG 1995979 32 100.0 35 ................................ CTCGGGCATTAGGAGCCAATTCGGAACGATTTTAC 1996046 32 96.9 34 ...........T.................... ATCGTGTTGATAATGGCCTGCACCGTCTGGCCGG 1996112 32 100.0 34 ................................ ACGCTGGGCCCGGCGTCCGAGCCGCTGCAGGGAC 1996178 32 100.0 34 ................................ GGAAACATGCCCGATCATGTCGGACGTGATGAAA 1996244 32 100.0 32 ................................ ACACAAAAAACAAAAGCCGTCATGCCGATAGG 1996308 32 100.0 34 ................................ TTACACCTGCTCGACTGGCAGCACCGGTAAGATT 1996374 32 100.0 34 ................................ CCCGTGCGAACCTCAAGCCAGGAACTCGGAACGG 1996440 32 100.0 35 ................................ CGGGGCGATGGGAGCAAGCGGCGTGGCCTCGTCGC 1996507 32 100.0 34 ................................ ACAGGTGGGACTATCTCATCGCCCCGCCCCGCAC 1996573 32 100.0 34 ................................ AACCAGGTGGCGGTCGGCAATGCGCGGGTCCGCC 1996639 32 100.0 36 ................................ CCCACCAGAACTGGTACTTCTTGCCACTTCTATCGC 1996707 32 100.0 34 ................................ GTCGCGGGCCAGAAACACAACTGCGCCCTCGTGC 1996773 32 100.0 35 ................................ ATCCCGACAATTCGCGCGGAATCGCAGGACGTGGC 1996840 32 100.0 35 ................................ TCGCTCGGCACGTAGCGGCCGGCGTAGGCCGCCGC 1996907 31 96.9 0 ..............-................. | ========== ====== ====== ====== ================================ ======================================= ================== 30 32 99.8 35 GTCGCCCCTCACGCGGGGGCGTGGATCGAAAC # Left flank : CGCTTATCCACCCTGGTTCTGGAGCTGACATGCTGGTCCTCGTCACCTACGATGTGAACACGCTCGAGCCAGGCGGCAAAAAGCGCCTGCGCCAGATCGCGGCCAGTTGCGAGGACTACGGGCAGCGGGTTCAATATTCGGTTTTCGAGATCGAGGTGGATCCAGCACAATGGACGAAGCTGAAGTCCCGGCTTGAGGCGATCATCAAACCGCAGCACGATAGTCTGCGCTACTATTACCTCGGCTCGAACTGGTCGAGGAAGGTCGAGCATGTTGGCGCCAAACCTGCCACGGACCTCAATGGCCCGTTGATCATCTGACCTTGCGAACCCCAAGCGTGCCCGCAAGGCACCCGCGGTTCGCACCAGAGCGAGCTCTTTGAAATCGTTCGGAACCTGACGGAACCAGAAAAATAATCGGCGACACAGCATTCCGTTGGGCCCTCCTTCGCATTCTTGACCGAATTTACACATCGTGTGGAACGTTCTATTCGCACGGCA # Right flank : CCAGTAGGTCTGGTCGGCCTGCTCAAGCGTCATGGTTGCCCCTCACGCGGGGGAGGTCTACCATCTTCGCAACCATCTCCTTGAACCGCGCTGGGCGTGACCCGCGCAGCATAACGCCAAGCGCCGGCACGCCGGGCGGAAAGCCGACTTGTAGCGCTGCTGCGCGGCACTCGCAGCGAAACTCGGCAAGAGGAGAAGATTCTCGCTTCTCGATGTCACAACCGCCTTCCCTCGCCCGTCATGGGGGCGTCAGTTGCAAAAGGAGAGAGCGATGACGCCCCGCATGACCGACCATTTCAAACGCATCGGCCAAGCCTTCCAGGGACTGGTCACCTTCGAGACCGAACTACGCAAGGGCCCCTTGGAACCCGCGCTGCTGCATCTGGTGAAGATGCGCGCCAGCCAGCTCAACGGCTGCGCCTTCTGTCTGCAGATGCACGCGTCCGAGGCGCTGAAGGACGGCGAAACCCACCTGCGGCTGCACATGCTGGCGGGCTGGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCTCACGCGGGGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCCCCACGCGGGGGCGTGGATCGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.90,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //