Array 1 25786-24694 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZTX01000017.1 Neisseria meningitidis strain Neisseria meningitidis isolate B148, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 25785 36 97.2 30 ........G........................... GTTTCTTCCCATATACTGCTGTTCAAACCG 25719 36 100.0 30 .................................... CTTCCGTGAGATACATTTCCCAATCTTCTT 25653 36 100.0 30 .................................... TGATTTGCTCGACAGGTGAATAGCCATAAA 25587 36 100.0 30 .................................... AATTTAATACGGCGACCATCTCGTGCCAAG 25521 36 100.0 30 .................................... TCATCAATCGCCCACTCAAACCCAAGCATA 25455 36 100.0 30 .................................... CCGCAAAGCAGCCGAAAAAGCCGACAGGAA 25389 36 100.0 30 .................................... TGACAAATAAAGCACGATTGTTGCAAAAGG 25323 36 100.0 30 .................................... CCAACGGATAAAATTACGCCCAAGCACCTG 25257 36 100.0 30 .................................... GTATTGAGCGTCAAGTACTCGCCATTCGAG 25191 36 100.0 30 .................................... TGAAGGTTCGATAATTCGACCTGAAAAACG 25125 36 100.0 30 .................................... TCACTCTAAAAATCCGATTCTACCACCGCT 25059 36 100.0 30 .................................... TTGGCTCGTCTGCTGCCGTCAATCGTGCGC 24993 36 100.0 30 .................................... TAGATTGCCTCATATACGCCGAGCGGGTAG 24927 36 100.0 30 .................................... CAGGTCGTGCTGGAGCAGGCCGACGATTTT 24861 36 100.0 30 .................................... CATACAGTTCATCTTCACCTGCAATCAGGG 24795 36 100.0 30 .................................... TCTGCGGATTCGTACAAGTCATAAACTTTT 24729 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 17 36 99.8 30 GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAACGGTCGATGTGTTTGGCAATCATGGCTTGTGCGGTTTGCTGAAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : ACCCCAACGGGAAATCCTTATTCTATAAGGATTTCCCGTTTTATTTAGTCTGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACATAGTCTATTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGCTGGAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATCGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACACCGGCTTGAAATGACGAAACCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //