Array 1 23632-22763 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLJD01000085.1 Acinetobacter baumannii strain ABOB12 contig-20, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 23631 29 96.6 31 ............................T AAAAATAGTGTGTTAATTATTTATGATGAAA 23571 29 96.6 31 ............................C GTATACATGCACATCAATACGATATCCCGAT 23511 29 100.0 31 ............................. TACTATTATAATGATCTAAACCCATTACAAC 23451 29 96.6 31 ............................T GCAGCTACTCGACATGTTGGTAGGGCAGATG 23391 29 96.6 31 ............................C AGTCGGCTGGTGCTAATTGAATAAAATCGTT 23331 29 100.0 31 ............................. GATTGAGGCGATTTTTATCGCGGACATTGCC 23271 29 96.6 31 ............................C AGTCCCCGCTTTGAAGCATTCCCATCAGTAC 23211 29 96.6 31 ............................T CACAGCTATCGTCTGGCTGCCGTCGCGTAGA 23151 29 93.1 31 A...........................T TATTATTAAACGGGAAAAGTATATTCTTGCT 23091 29 100.0 31 ............................. TACTATTATAATGATCTAAACCCATTACAAC 23031 29 100.0 31 ............................. TCATCAATAAGTTGGCCTTGATTTAAATAGT 22971 29 100.0 31 ............................. GATACAAACGAGTTCGCATCTCGACCAGAAG 22911 29 100.0 31 ............................. TTATCCAGATAAAACCATATCTACAAAGTGG 22851 29 96.6 31 ............................T CAACCTGAACACAGACATACATGTTCTATTG 22791 29 82.8 0 ...GC...................AT..T | ========== ====== ====== ====== ============================= =============================== ================== 15 29 96.8 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : | # Right flank : TTGAATCTTAAAAAGAGAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAATCTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTACA # Questionable array : NO Score: 5.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.63, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 23124-20101 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLJD01000244.1 Acinetobacter baumannii strain ABOB12 contig-43, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 23123 28 100.0 32 ............................ ATCATCGTAAGCATTGAATCGCGTGCCTTCAA 23063 28 100.0 32 ............................ AATGAGAAGAAAGTGGTTGCTATCGACTTCTT 23003 28 100.0 32 ............................ AATATGCTCGAATGAATTCCTTGTAGCATTCT 22943 28 100.0 32 ............................ AAGAACTGTGCGTCTTGGCGGTGGGAAAATCA 22883 28 100.0 32 ............................ ACTCCATAATTGCAGGTGTTGAAAGCTCACCG 22823 28 100.0 32 ............................ TTCTTGATCATCGTTATGTAAAAACCATTCCA 22763 28 100.0 32 ............................ AAGAAAAGTATGAACAGCAACTTATAGAAAAA 22703 28 100.0 32 ............................ GATGACCGTACCAACTGGATTTTGATATTCAT 22643 28 100.0 32 ............................ TTGTTGTGTATATAGGTTTTGCAGCTCATCTA 22583 28 100.0 32 ............................ TATAATCGAAAAACATCCAAAAGCGGGCAAAA 22523 28 100.0 32 ............................ AAAACGACCTTGTGACTCTGTGAATTCAATCT 22463 28 100.0 32 ............................ AGTTGCAACTTTAACAACTGACGGTACTGCTG 22403 28 100.0 32 ............................ ATAGTGGAAATACACGTAAGTTATTGATTTAT 22343 28 100.0 32 ............................ TGTTGTTAGGGCTATTTCTGCTTTATCCGATA 22283 28 100.0 32 ............................ AACTCATACAGCGGGTCCAAGAGCCTATGGTA 22223 28 100.0 32 ............................ AAGACCAGTTTTGAAGGATATTAACTTTTTAT 22163 28 100.0 32 ............................ TCGTGCTTGGGTATCACATATTGATGTGACTT 22103 28 100.0 32 ............................ CACTAATCTCTTTGATTTAATTAAGTTTCAAC 22043 28 100.0 32 ............................ ATCCGCATCATCAAAAATCGCAAGTGGGTTTG 21983 28 100.0 32 ............................ AATAACGACGGTTGCGCTGTTGCACGTTCAGC 21923 28 100.0 32 ............................ TTGATGAGAAACTGTTATTGTGTATGTCTCAC 21863 28 100.0 32 ............................ ACGACAGGTAAATTGGTTGCCATGTGTATTGA 21803 28 100.0 32 ............................ AATTGTAGAAAGCGTATCACTTATTTGCTTAT 21743 28 100.0 32 ............................ ACGGATTACCTACAGGTTTACCAGTTGCATAA 21683 28 100.0 32 ............................ TCTTGAAGGTGAGCCAACAAAAATCCATTTTT 21623 28 100.0 32 ............................ GTTTAAATCCATAAATGAATTTTGCGGTTTTT 21563 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 21503 28 100.0 32 ............................ AATGTACTTTAATTTCCACTCGACACCAGTTC 21443 28 100.0 32 ............................ CATGACCGAAACAGCCAAAAAGGTTTTATGTA 21383 28 100.0 32 ............................ TAAAGGATAGTTAGCTGTAGGCCCTGCGGTTT 21323 28 100.0 32 ............................ TTATAGTTATGTGTGTGATATCGTTAAGCTGC 21263 28 100.0 32 ............................ TAGCACAATCCAAACCTCAATAAAAAGTAAGA 21203 28 100.0 32 ............................ GAGCCAATAAGATCGCGAAGTATGCGGAAATC 21143 28 100.0 32 ............................ ACAGAGAAAACCCCACATGTTCGAGGGACTGC 21083 28 100.0 32 ............................ ATAATTCCGCCATCCTCGGCTGAGATATGGGT 21023 28 100.0 32 ............................ TGCCGGAGCGGTCTTGTCATTGGCGAACCCGC 20963 28 100.0 32 ............................ TATGCGATTTGATAATTAAATTGCGATACTGG 20903 28 100.0 32 ............................ GAAATAAAAAACACCTGATGAAAACAGTTCAC 20843 28 100.0 32 ............................ ATAATCACGAATATCACCAGTAAACCAGTGAT 20783 28 100.0 32 ............................ TTATTGGTCCTGGTCAGTGGAATGGTGATTCT 20723 28 100.0 32 ............................ TGGGTAAAAGCCGATGGATTAATCATCTTTTG 20663 28 100.0 32 ............................ ATTAACAAGAGTGGAATTTATTGAACTATTAA 20603 28 100.0 32 ............................ TCTGGGTTCTTTTCGCGTGTATGGGATACTTG 20543 28 100.0 32 ............................ TGTAAAGTCATTCGTAATAACCGTTATACGGC 20483 28 100.0 32 ............................ AAAACCAATCAAATAACGGTTATGTGGCCACA 20423 28 100.0 32 ............................ CATAGCGACATATAGTTTTGCCCGGATCTGAT 20363 28 96.4 32 ..................A......... TGTTTCGCGTTGAGGTCCGGGTAATCGCCTAT 20303 28 78.6 27 ....C.....CTCC..........T... GTCTTGTATCCTGATTTCAAAGATTCA 20248 28 92.9 32 ....C....T.................. ATATCACGCGCCATTGCAAGTTTTCTACCGAT 20188 28 89.3 33 ...A........CC.............. TGATCTTTAAGATTAAGCATCCGTTCTGTTTTT 20127 27 85.7 0 ...TG.......C...........-... | ========== ====== ====== ====== ============================ ================================= ================== 51 28 98.9 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : TTTAAAAATAGAAGCCGTTTTACCTGCATTTGCCTGATAATCGGTTGGAATAAGGAAGTCTTCATTTAATAAAGTTCGAGCACTGAGATAGGGTAAATCAAGTGCTTGTTGTTTACTTAAACGAATTCCACCTTTTTCAATATTGGAATTAATCGTCTTTAAACTAAAGTGTACCGATTCTTCTAAAGCGTTTATAAAAATATCAGTTTGTGGTTCAGGCATTATCTTCCCCGTTTTTGTTATCTAGCCAATTTTTAACACATTATTTGAAAAATGAAAGTATTGAAGGTGAGAGCTGCGACAAATTAAGTCGTAAAGACAATTGGATGAAAATATTATATGCTTCATAAATTTAGCCTAAGACGATTAGGTTATATTTTTATAAAATTAGAAAAATTAATATAATTCAATAGATTATATTGTTCTTCTATTTTGAAGGTTTTTAATTCATTAAAACTTTATATTATTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCTA # Right flank : GAGTTTCTTTCAAAATTTAAGACGACGTATTTTGTCGTTAAAAGGTTGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAAGATTATATTTTTATGATATTTAAACTTTAACAATAAACTATGCATGTCATTTTCATCTCGGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCAATTTTGGATAGCTATGCTATTCGTACAGGACATTCGTCTTGGCAAGCACCAATGACAATGGACGGCTTAAAAGAAATTCGTAGTGCATTAAAAAAAGTAGCTACCCGACAAACTGCGGTGGCCGCTTACATTAATTTTGGTGTACGCAGAATGAAGCTTGCATGGGTTGTGGGAGCAAAACATAAATTTGCACACGATGGTGCATACCCAGTTGCATCGACTAAGAAACAGCAAAAGTTACTCATGCTTGATGAGTGGGTCAAAGTAAGTAGCTTGTTGGCAGGTGCAGCAGGAGACATGCATGATATTGGTAAGGCA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 28214-31843 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLJD01000244.1 Acinetobacter baumannii strain ABOB12 contig-43, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 28214 28 100.0 32 ............................ TTCTTCTCTCTGATTACAAGCTCCCTGGGGCA 28274 28 100.0 32 ............................ ATAAGGACGATGCAAGTGATAGTGCTCACCGA 28334 28 100.0 32 ............................ ATGCAGATAAAACAGTAAAACTCTATGAAAGC 28394 28 100.0 32 ............................ ACTGGTTAATTTTAATAATGCGGATGGATATT 28454 28 100.0 32 ............................ TCTTAATCTCTTCAATGTTCATCTTCAACCCT 28514 28 100.0 32 ............................ AAAACGTTGAACATTAGTAAGTGTTAGAACAC 28574 28 100.0 32 ............................ TTACGATGGCCAACAGAAATATTAGACATATA 28634 28 100.0 32 ............................ GATAAAGGTTGTATGCGCTCTAAAGCGTTAGT 28694 28 100.0 32 ............................ AATCCAAACAGCAAAACCGATGATACCTGCAA 28754 28 100.0 32 ............................ AGTGGGCTTATATCTCTTCTATAAAAAACGGA 28814 28 100.0 32 ............................ AATGCTGCTGTTGACGTGGCTGGTCCAGTTGC 28874 28 100.0 32 ............................ GGAGTCAGGCACACTATTAGATAGCAGTGTGC 28934 28 100.0 32 ............................ ATGATGAACCTGTCTTACCTTCAGATCCTTCT 28994 28 100.0 32 ............................ AAGCATTTCAGTTGCACCAAGATGAATACTTT 29054 28 100.0 32 ............................ TCAAGTGCAGATGCAGCCTAATTATTCTTCTT 29114 28 100.0 32 ............................ AAGAACGTTTGGCAGCAAAAGGAACATTACCA 29174 28 100.0 32 ............................ TTATTGTGAGCACCTTGATTGCTGTGCGCTGC 29234 28 100.0 32 ............................ TACAGCGGGAAACTTGAAAGTCATTGCGAAAT 29294 28 100.0 32 ............................ TGATTGCCCCCTGAGGAAACTGTATAAAGTCC 29354 28 100.0 32 ............................ AAACACCAACTAAGCCATTCCCTATTCAAAAA 29414 28 100.0 32 ............................ ATGAACTTTTAATGGATGCATGCGCCGCCCAC 29474 28 100.0 32 ............................ ACGAACAACGATAATTTGGAATACACGCTCAT 29534 28 100.0 32 ............................ TCAGGAGAAAGATCGTTCAAAAGCTCAAAACC 29594 28 100.0 32 ............................ TGAAAGTTTTGATATCCACTCTGCTGTTTCAA 29654 28 100.0 32 ............................ AGATGGTAAGAAAATTATTGAGTCTGGAGACA 29714 28 100.0 32 ............................ CGACAGTCCAGTTGATCAGATCTTGATTAGAC 29774 28 100.0 32 ............................ AATGACATGGTTCAACAATTAAATTCATCTCA 29834 28 100.0 32 ............................ GTTCTTTTCTGCAATATGTGCCATTAGGTATT 29894 28 100.0 32 ............................ ATTTTAGATGAAACAAAAGATAGCAGGATTAT 29954 28 100.0 32 ............................ AGACCAAGCGGATTGACCGTATTGATAAATAA 30014 28 100.0 32 ............................ TTCTGCAATACAAATCACTGGATCAGCCAGGT 30074 28 100.0 32 ............................ TGAGTCTTTGATTTCCCAAATATTACTTGAAA 30134 28 100.0 34 ............................ CCTGAAAAATTTCACTGTGTCCATTTCGTTATTA 30196 28 100.0 32 ............................ TATGTCTTTAAATTCTGAAAAAACACTTGTTC 30256 28 100.0 32 ............................ GAAAAAATTGAAAACTTTTTAGAAGTAAATGA 30316 28 100.0 32 ............................ GCCACACATGCCTAAAAACGCAAGTGCGCTCG 30376 28 100.0 32 ............................ ATTATCAGATAAGCCTTTTATGAATGATCGTT 30436 28 100.0 32 ............................ ATTAGCTATTAGCTTTTTGGCAACAACAACAG 30496 28 100.0 32 ............................ AGTTCATGAAAACAGCTTTAAAAAGAAAGCAC 30556 28 100.0 32 ............................ TCCGAAGGTAGTGAAGCTGTGTGTGAATTTAC 30616 28 100.0 32 ............................ TTGCAAGCTCGTCTAGCTAAAGTAGACCCTAA 30676 28 100.0 32 ............................ TGGTACGACAACTACGAAAAGCTGAGCAAAGT 30736 28 100.0 32 ............................ TCAACTTAAATGGATGCTCCCCGCGGTGAATT 30796 28 100.0 32 ............................ TTGATTGCTAGACGGATTTTTAGGCAGATCAT 30856 28 100.0 32 ............................ GAGTTTAATGCGCTATATGGCGACGAGGATTT 30916 28 100.0 32 ............................ CATGCAATCGCGTTGATTACCGCAGCTTCGAA 30976 28 100.0 32 ............................ ATGAGCCGCAACCATACGGTCTATGACTTCCA 31036 28 100.0 32 ............................ ATAGCGCCCTGCTCTATGTTGTCACTTCCGAA 31096 28 100.0 32 ............................ TCCAAGTGAATCGGCTCCTAATGCAAATGACC 31156 28 100.0 32 ............................ TGAAAACCAATATGCTGCCTAATTGCCATAAG 31216 28 96.4 32 ....A....................... GATCTGCGTCCATTTGTACTTGCTGCGGGTGC 31276 28 89.3 32 ....T.......AT.............. ATATACAGCACCGCTTAGTGCGACGCGGTCAT 31336 28 89.3 32 ....T.......AT.............. GCCCACAGGTTGAGCATCAACGGCCATCGAGA 31396 28 89.3 32 ....T.......AT.............. ATCATAGAGCTCACTTTGTCGTTGAGCCTGCA 31456 28 89.3 32 ....T.......AT.............. AGAAGGCCCGTAATTTAACTGTAAGCCGTGGT 31516 28 89.3 32 ....T.......AT.............. TCTTCCTGAGTTTTAATCCCATTTGCCTTACA 31576 28 85.7 32 ....T.T.....AT.............. CATCTTCGCCAATTGCTTTTGGAGAGTTGCTA 31636 28 89.3 32 ....T.......AT.............. TTCAGGGAATTATCGTGAAACTTTCATTGACT 31696 28 89.3 32 ....T.......AT.............. TGCACCAGCTGCTGGCTGGTTGAAATCTGCAA 31756 28 89.3 32 ....T.......AT.............. AGAAGGTGCAGAGTTTTGGGACTTTGGGTGGT 31816 28 89.3 0 ....T.......AT.............. | ========== ====== ====== ====== ============================ ================================== ================== 61 28 98.1 32 GTTCGTCATCGCCCAGATGATTTAGAAA # Left flank : ACGTTGGGCCAAAACGCTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGTGATGAAGGCAAAAACTCTCATGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCTGATCTAGTTAAAGATGCTTTTGTAATGCCACTCGCTTTTACATGTGCAGCAAGAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACTTTTAACCCAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TCTT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCCCAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCGTCATCGCCCAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-5.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //