Array 1 223512-223739 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBEW010000001.1 Clostridium botulinum strain DFPST0024 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 223512 29 100.0 37 ............................. CATATTTTGTTCTACTTCTGAAACTGTTATAGGGTCG 223578 29 100.0 38 ............................. CTTGTTATGTTTTCCTTTTTCATATAAAATCACCTCTA 223645 29 100.0 37 ............................. TTCTTCCAAGAATTTATATTCATCTGAATACTCTATT 223711 29 89.7 0 ...............T.A.......G... | ========== ====== ====== ====== ============================= ====================================== ================== 4 29 97.4 38 ATTGAACATTAACATGAGATGTATTTAAA # Left flank : AATCGGATTTGCATTTAAAGAAGTAAAAGCTGGAGAAGAAAAAAGATTTGAGATAGTAATAACCTATAATAAAAAAATGTATATTTTAGAACTTAAAATATGGAGAGGTGAAGAGTATCATAAAAAAGGCTTAATACAGCTAGCAGAATATTTAGAGCAATATAAATTAGATAAAGGGTACCTTTTAATATTTGATCTAAGAAAATCCACAAATTTAATAGGAGAAGTAGAAGAAAACTATATAGGTATAGAAAATCATAGTAAAAAAATAATACAGGTTTATTGTTAAAAAGTATATAGCAGTTAAAAATTATTTCTAAATATTTTTCCAAGTGAATTAAAAATCTAAACCTATCCTAGCCATTGGAATATAAGGCTTAGGATAGGTTTTTATTATGAAATTTTAAAAAACAAAATCGATTGGAAAACGTTCTATAAAACCTTGTAAAATCAGTGCTTATATGATATTCTTGAAATTAAGGAATGGCTATTTTACTGTG # Right flank : AAAAACAAATAACGATGAAAGGATAACAAATAATAATTAAGGTAGCTTTTCATTGACAAGGTTTTTCAGCATTTTGAAATTGAAAAATCAATAGCAAATATTATACAGAGAGGGAATCAATTGTAAGCAGTAAAATCTAATTTTATAGTTAGTTTTTTATAGAATTAGATAGTTAAAAAATTAAACATATAAATATGTGTTTATTTTTTATATAAATTTGATATAATATAAATAAGAAAAGCTTAGTGTTGGAGCACTAAGCAATCCTTAGAATATTTATTTTGTTTTAGGGCTATTGGATGAATTTAATAATTAAATTTGAGAGATTGAAGCACTATTCTTGGTCGGATGGGTGCTTTTTCTCTTTGCCATTAAGTTCTATGTGAATACCAAGAAATTTAATCTTGATAACTAGTTTGGAAATAAAAAGATTATGTTTTAAAATTAATTTAACAATATAAATTACAACAAAACTTTTTATGGTTAATTCTAGCATATCC # Questionable array : NO Score: 5.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACATTAACATGAGATGTATTTAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 224645-224805 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBEW010000001.1 Clostridium botulinum strain DFPST0024 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================ ================== 224645 33 100.0 30 ................................. TAAACAAAATTCCCAATGGCTTTTATATAG 224708 33 97.0 32 ..............................C.. ATTTAATTATATGTATTAGAAAGCCAGTAACC 224773 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ================================ ================== 3 33 99.0 32 GTTGAACATTAACATGAGATGTATTTAAATGTA # Left flank : GATAACTAGTTTGGAAATAAAAAGATTATGTTTTAAAATTAATTTAACAATATAAATTACAACAAAACTTTTTATGGTTAATTCTAGCATATCCAATACCACCTCCTATTTATAAGTGAAAGACTCACCAATATCCTAGGAGGATAAAATATTCAAAACCCCCGTAGCCATCCACTACGGAATTACTATCCTAACTTGGATATTATATCATAATTATCTATATTAAAAACAGAGGGATTAAATGGTAAATCATATTTCCATTTAGAATATTACGTTTATTTTAGGATAAAAATAACAAATAATTATATAGAATACGCTAATATTTTTCCAGCCAATTTTAACTTATAAGCCTATCTTAGCTTTTGAAATGTAAGGCTTAAGGTAGGTTTCCCTTATATATTTATAAAATATCATAATTGGTTGGAAAATTTTCTTTAAAACCTTGTAAAATCAATGGCTATATGCTATTCTTAAAAATAAGTAATGGCTATTTTACTATG # Right flank : ATTTAATACATTTTCTAAAGTATTAGCCATATGTTGAATAATAAGAATCATTAAAAGTCCTAGAAAAATCTAAGGCTTTTATTTTATGCAAAGATTTAGAATAGAATATGATAGGTAAGTAACTTATCATTAATAAAGATAATAATATTTTTAAAATAAAAGTAGAATAATCGGTTATATTAACTAAAGGCTATATGGTATAATATAGATAAATTTGTATAAAGAGGTGCATAAATGGAATTTTGTGAACTGATTGCAACAGTGATGTTAAAAAAAGATATATATTTTGAAGATTGTGGATATATAATAGGGAAAAACATAAATAAAAGTATGCTTTTGGATAAAGATTTAAAGGAAATACATCCAAAGAAACAGTACAAAAATTACGTATTTAATAGTTTTTATCCTATAGAAAGAGACAAATTTTATAAAAAGGATAGATTATATATTTTTAATATTAGGGGATTGAGTAAAGAATTTATAGATAAAATAGAAACTTG # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAATGTA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 3 239449-239743 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBEW010000001.1 Clostridium botulinum strain DFPST0024 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 239449 30 100.0 35 .............................. TCTAAATCTTTTGCACTTGCTAATTTACCTTTTTC 239514 30 96.7 38 .................A............ TTAATATATTTACCAAGGTTTTATATTATCATACTTAA 239582 30 100.0 36 .............................. ACTACTGCAGTAACGGAATGTGGTGGCAAACCTAAT 239648 30 100.0 36 .............................. AAGGGTTCTCCACACTCTAGTTCTTTCATAAGTTCA 239714 30 90.0 0 .......................C....GC | ========== ====== ====== ====== ============================== ====================================== ================== 5 30 97.3 36 GTTGAACATTAACATGAGATGTATTTAAAT # Left flank : TTAAGCAGAGAACCCAAATCTGTGATTTGGTGTGAATCGCTTACTCCTTCGAGAAGAGGAGAAGGAGTTTCATTAAATAATAATTAGACACTTAGTATTTTAAGCTTAAGTATGATCTGAAAAGGTTGAACATTAACATGAGATGTATTTAAATTATTTACATTCTGTTATACCACAACATTTACAACATGTTGAACAATAACATAAGATGTATTTAAGCAGAGAACTCAACTTTACGATTTGGAGTAAGTTGTTTATTTCCTGTAGAGGAGAAGTATGAGACTCATTAATGAGCATAGTATATATATCATATCTAATTAAATTTTTCCAAGTGAATTTAAATTTAAAACCTATTCTAGCCATCGATATGTAAGGATTAGGGTAGATTTTTATTATGTATTTATGAAAAATAAGAATCGGTTGGGAAAATTTCTTTAAAACCTTGTAAAATCAATGTGTATATGCTATTCTTAAAAATAAGGAATGGCTATTTTACTATG # Right flank : CAAGAAATGCAATCATCTGATTTAGAATAATCATTTATACATGGCAATAATTTTTTGCTTTATTACTTCTTGAGTTAAATTGTGGGATTTTATTGACTAAAATATTTTTAAAATATAGTTTTAATTTTGGTTGTGCTTTAAAGTAGTGTTGGAATTTTAAACCCCATTAAAAGAAGTTAAATATTTTCTTTTAATGGGGTTTATATAAATTGTAAGATACTAATTATTTAAAAATTTATTTAATGAATCATTATCTTTAAATAAGTCTTTTAAGTTACCGTATTTTTGTCCTAAATTTTTTCTATCATATTTATAGGATTCTTCTCCTATATTCTCTACATTAAATTTAATAATTTCAGCATTTGGTATAAGAGACAATAATATCACTGCATTCTTTTCTAAGAGTTCTTCAACTTTTTTGTCCTTCCAAAATTTATTATAATTTTCTTCCCCTAAATTTTTATTTGTTTTATAGTTAACGGTTATTTCATAGGGCTCTT # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //