Array 1 15571-13833 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ955242.1 Winkia neuii strain MJR8396A Scaffold148, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 15570 29 100.0 32 ............................. TATTGAGGCCGGGGGGATTTTACCTGCGTCCC 15509 29 96.6 32 ............................T GAAATCCCAGTACGAGGCGCAGGCTGAGGCGG 15448 29 100.0 32 ............................. CAAGCGTACCAAGGGCAAATCAATTTCTTAAC 15387 29 96.6 32 ............................T AATGGCATTAGATAGTAATATGTCCCTATTAT 15326 29 100.0 32 ............................. AGTGCGAGGCGTAAGCCAGCGCAAGCGTTGGG 15265 29 100.0 32 ............................. GGTTAGCCCGGCAATGTCAGCGGACCCGGGGG 15204 29 100.0 32 ............................. TCTGGCTGGGGTAGGCAAGATAACCCGCAACG 15143 29 100.0 32 ............................. GCACGCCGTCCCTATGGTGGGCGATGGAGTAT 15082 29 100.0 32 ............................. GAAGCTCCTAGAGCGATTCAATTTGAAGGAGA 15021 29 100.0 32 ............................. CTGGGCATACACTCTAATTATTACTTGTGCGG 14960 29 100.0 32 ............................. TTGGCTTGCGTCCGGGCAGGGCATTAGAGAGG 14899 29 100.0 32 ............................. TGACCTACCGGCCGCATACAGCGAGAGCTCCC 14838 29 100.0 32 ............................. TACCCATGTATTCACAGCGCGGCGGAATCCGC 14777 29 100.0 32 ............................. ATGGAGGAGAAGAATACCTCTACTACTACAAT 14716 29 100.0 32 ............................. TTCGTTTTTGTAGATGGTGGAGAGCAGGCCGT G [14694] 14654 29 100.0 32 ............................. CGCCGCTGATGTGGACCGCATCGGCCCCGAAG 14593 29 100.0 32 ............................. GTCTACTGGTGCTGTAAGTATTGCTGTCATGT 14532 29 100.0 32 ............................. GAAGTGCTGCCCACTATTCGTAAGACGGGCTC 14471 29 96.6 32 ............................T AGAAAAAACCGGCTTGCACGTAAGGCCCGTTG 14410 29 100.0 32 ............................. TAGCAATGTGCATCAATTCCGCCTACAAACAC 14349 29 100.0 32 ............................. GCTCGCTTTGGTCTTTATTTCCTCAAAGTATC 14288 29 100.0 32 ............................. ATAAGACAGAAAATTGATACTGAATTAGGGCA 14227 29 100.0 32 ............................. ACGCTACCTTACCCGGCAGGATTTGAGCCCAA 14166 29 100.0 32 ............................. GCGGAAACCGTAACCTTTGTTTCCTCCCCACA 14105 29 100.0 32 ............................. CCTACGTTGGGGTAGATCCGGGGCGGGGGCAC 14044 29 100.0 32 ............................. CGGCACCGCGCTGGTACACACACCAAGGAAAG 13983 29 100.0 32 ............................. CTTTCGGTTGTGCGCGTGCCAGGCTGGGCGGG 13922 29 96.6 32 ............T................ CAGCTACAAAAGACTCTCAAGGGACTAAGCGC 13861 29 93.1 0 .C........T.................. | ========== ====== ====== ====== ============================= ================================ ================== 29 29 99.3 32 CTTTTCCCCGCGCGAGCGGGGGTAATTCC # Left flank : AGCAAGGACGGTGCCACAGGTACCGACGAGGGTGGCAACGCTTCTGACGAGGGCGGCCACGCTTCTGACGAGGGCGGCCACACTAGCGATCCTGGCGCGCAACCCGGCACCCAACCTGGTTCGCAGCCTGGGGCAAAGCCTGGTTCGCAACCCGGTGCTCGGCCCAGCGGCGAAGGCAAAAATGCTGGGGGCAAAAACGCCGGCAAGTCTGATGCGGGACGGCAAGCGGGTGAGCCAAAAACAGTCGGCTCGTTCTTAGCCACAACTGGAGCGACAGCTTTAGTACCCACCCTGCTAGGAGCCATGGCAATGATTAGCCTGGGCGCAGTTGCAAAACTAAGCCGCAAAAAGAACTGACCGAGGCTAGCGTCAGAGGCTGAGCTGGAGAACTTAGATGGTGCGTTACTAGGTATAGATACGCGCCTTGCATGCGCCAGACTGTAAGATAGCTACCAGCATGGAAGAATGATATAGACGCCCAAAAGCGCAGGTCATTTAGT # Right flank : TGGGAAGTCTCGCTATATGGGGCGGACAGGTCCTTTTACCCGGGAGAACAAAACAGGGAGAAATTTCGGTAAATGCTACTCGAGGGCTGTTCAGCGGCCAGTTACGCGTAACTCAGATACATGTAGGAATAATCGTTTAATATATCCTAGCCGTTTCTGTAGCTGTTGCATTTAGTTGCAGTAGTGGCCATTCTTATCTACACCTAACCGTATTGGTTTCAGGCTATTTAAGGATATTCCCTGTCGTAAGTTGCATGCCCTGTGATTGATCAACGTAGGGGCCGCGTCAGCAACCATTCCTGAGTCTTTTAGGCGTTAGAGCTGCAGCTTTTCCTTCAGACTTGCGTACCATTGTTCTCGTGTGCCAACAGTGGTGAATTGCTGGCGTCTAGGTGCTAATTCCTGTCCGGGAACATAGTCCTTTATAGTGGCGAACCGTTCTTTTGAGTTGCTGTTCGTTACGAATAGTGGCAATTTCGCGAAATCTTTTGTGGGACCTA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTCCCCGCGCGAGCGGGGGTAATTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.20,-13.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //