Array 1 6482076-6483124 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP024024.1 Pseudomonas aeruginosa strain PARM801 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 6482076 28 96.4 32 .............C.............. CGCAACAAGCATGGAGAACAGCATCAATTCGC 6482136 28 96.4 32 .............C.............. TCGGCCCGTCCAGAACGTCACACGCTCGCCAT 6482196 28 96.4 32 .............C.............. TTTGTCTCGATGATCATTTTGACGCGGCGCTC 6482256 28 96.4 32 .............C.............. ATCACGGCCACCCGAACACGTCGCCCAGGAAC 6482316 28 96.4 32 .............C.............. AGTGCCACCACCCGTTCCGCCGCCATCACCAT 6482376 28 96.4 32 .............C.............. GAAGAACACGCTGGCCGGTGAGTTCTCCGGGC 6482436 28 96.4 33 .............C.............. ATGCAGCCAGGGCTTACTCCGCTGCTGCTGGAC 6482497 28 96.4 32 .............C.............. TTGAGCTTGTCGTTGTACTCGTCGAGGCTCAT 6482557 28 100.0 32 ............................ ATACTGACTCAGCCAGGGAAAAGTCACTTGGA 6482617 28 100.0 32 ............................ AGCGTGCCATGGCGGCGGTAAGTCAAACCGTT 6482677 28 100.0 32 ............................ TGGTCGAACAGATGGCGGTCCTCGGCCAACTG 6482737 28 100.0 32 ............................ ACGTCGGAACGCAACTACCTGACCGCGTTGGT 6482797 28 100.0 32 ............................ ATCAGGTACAGCACCAGGGCACCGAAGACGTT 6482857 28 100.0 32 ............................ CGCAACGTTCGTGATCTGCCGTTCGCCGCCCA 6482917 28 100.0 32 ............................ TCGGCGAGGCGATCGATCATGCGAATCAGCAA 6482977 28 100.0 32 ............................ ATCGACCACGACAGTGCTTCCCTGGTCTATTC 6483037 28 100.0 32 ............................ ATTGGCCGTGCAAGGTCCACCAGTCGATGCTT 6483097 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 18 28 98.4 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CATGTGTCCGCGTAGCGCCACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCAATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCACTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCCGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGTTGCATCGCCCATCACAAGACCTTTCGCGCTCGAACGGCGAGGCTCACCGCCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCAGGAAAAACTCGGTATTTCCTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCTA # Right flank : ACTCAAGAAAGAGCAGAACGGCCAGCCTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATCCACGAAGTGAGGCTTGCCCTCCAAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGGCCAAGGCAGGCACAGAAAACAGCTTGAGCAGCAAACATGAAGCCCGCTCGAACGTCCCGTAGGGCGAATACCGCCACAGGCGGTATCCGCCGATGCCCCGGACAGCCGGCGGATAACCGCAAG # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.94, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : GTTCACTGCCGTACAGGCAGCTAAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [0-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.41 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //