Array 1 229242-228920 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAILXY010000007.1 Ottowia caeni strain BD-1 seq7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================== ================== 229241 37 100.0 34 ..................................... AGCGTTCTCAACGGCGCGCCGACCAATGCCTACT 229170 37 97.3 34 ....A................................ CAGACACAACCGCAACACCCGCACCCCTGAACGT 229099 37 97.3 34 ............T........................ TCCATGCGCTCCATGGCATAGCGATGCGAGACAT 229028 37 100.0 35 ..................................... TGTGAAATAGGAAACAACCGCTTAGGCTCCAGACT 228956 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== =================================== ================== 5 37 98.9 34 GGATCGCCCGTCAGTGATGGCGGGCGTGGATTGAAAC # Left flank : TGACGCGGGCAGTGGGTGGAACACGGCAAAAGCTTTCGATGATTGCCACCGTCACGAACCAGGGTAAGACGCGCTGGATGATCATTGATCAGGCGTTCAATGCCGACAAGCTGATCGAGTTTATGCAGGCCTTGATCAAGGACGCGCAGGGCAAGAAGATCTTCCTGATTCTTGACAACCTGAGGGTGCACCACAGCAAGCCGGTCAAAGAGTGGGCGGCATTGCACAAAGAGGACATTGAGTTGTTTTACCTGCCCAGCTACAGCCCCGAGCTCAACCCAGAGGAGCGGCTGAACGCAGATCTGAAGCACGCGATTGGCAGCAAAGTCCCAGTGAGAACCAAAGCCAAGCTGCGCGCTGCAGCCACTGAACACATGACAATGCTGCAGAACACGCCAGAGCGGGTCAAGAAGTACTTTGGCGACAAGCATGTCGCCTATGCAGCCTCATGAATAATTCCCGCCGGATCAATAGTAATGGCGGCGTAGGCGTCAACGGAC # Right flank : CAGGCGGGCCAAATCGGGTGGGGTGAATGTCCCTACGGGATGCCCATCAGTGATGGCGGGCTGCAGAGGCCGCTGTTCAACTGTGTCCAGATGATGCTGAAGTCGCAGGGCAACAGTGCGTTCATGTGGTCGGTGCAATCCAAGATGGATGCCGCAGTTGAAACCAACGGCGAAGAAGCTGCTGCTCATCAGAAGTTGCGAGCCGCATCTGCCCATGCCGGCGGTGTGTATGCCGCCTCACAGTTGGGCGGCATTGCAAAGGCCAGTGATTTCCGCAGTCCGCTCAACGCGAAGGCATATCGGCGACGGAATAACCCAGGCTGACTGTGGCATCTTCCGGGATCGCCGGCATGCTGGCCTGCCAAGTCTCCCACTCTGCCCGCATGTCCTTCAGGCGTTCCGGTTCAAGCTTGGCTAGGTTCGCCCGTTCGCGCGCGTCATTCTGGATGTCGAACAGGTAGTCGTGGCCGTCTACGCGCAGGTACTTCCAGCGGCCTTTT # Questionable array : NO Score: 9.01 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGATCGCCCGTCAGTGATGGCGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GCATCGCCCGTCAGTAATGGCGGGCGTGGATTGAAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.20,-17.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 245702-242968 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAILXY010000007.1 Ottowia caeni strain BD-1 seq7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 245701 28 100.0 32 ............................ ATCACGGCACGCATCCACCGATGGATCACATC 245641 28 100.0 32 ............................ GTTGAGAATGACATGGCACGAATGGTGCAATG 245581 28 100.0 32 ............................ TCAGCGCGTCGCCGTCATCAGTGAGAGGGTTC 245521 28 100.0 33 ............................ AGAGCCACGACCACCGACGAGCAAATCAAGCCG 245460 28 100.0 32 ............................ TAAATCAAGCGCCAGTTTCGTTGCCCTATTAC 245400 28 100.0 32 ............................ TTGTAGCAGCGTCGAGTCTCGATGCATTCGCT 245340 28 100.0 32 ............................ AGTTCAGCGGCTGTCGGATTGACGTAAATCAG 245280 28 96.4 32 ........................A... CGGAGCCGGCTTTTCTTTTGGAGGAATGAATG 245220 28 100.0 33 ............................ TCTTTCTCTATCGGGCAGCGCAGTAGTTGAGCC 245159 28 100.0 32 ............................ TCATCAAAAGCGATGGCAAGCGGGCCACAGGC 245099 28 100.0 32 ............................ TCAAAAGGTTCCGTTTCAAACGGAAGCTTGGT 245039 28 100.0 32 ............................ GCCCGGACTTCAGCGCGGCCCTCACTGCGGGC 244979 28 100.0 32 ............................ ACTGGTATAGCAGGTCCAAGCTGCGCTGCTGG 244919 28 100.0 32 ............................ TAGCCGTGAGCTGTCGCGGTCAAGACTGGCAC 244859 28 100.0 32 ............................ GCAAACGGTAAGACACTTCAACACATATTTTC 244799 28 96.4 32 ...G........................ GACAAAAGCCGTAGGAAAGGCTCCACGCAGCC 244739 28 100.0 32 ............................ GCACGAAGCAGAACGATACGCCTGCCAGGCCG 244679 28 100.0 32 ............................ CTTGCGAGGGCGTTTGCTCAAGCGTGATACTC 244619 28 100.0 34 ............................ CACCACGACGAGCAGCGGAAGGCGGTGAGTCGGT 244557 28 100.0 32 ............................ AGAAACCAGCCACTTTGACATCTAGCGTCCGC 244497 28 100.0 32 ............................ TGGTTGCGTTGAGTGCGGTGATTGCAGGATGC 244437 28 100.0 32 ............................ ACGACACAACACCGGGCACCAGCAATCCAGCA 244377 28 100.0 32 ............................ GTGACCGTGGCTGCGCCGATCAGCGTGTAGCC 244317 28 100.0 32 ............................ GGGTGACGCCAAGCATCGCGGCATCACGGATC 244257 28 100.0 32 ............................ TAGTGAGGGCTTTTTTCATGGAGACAGCCATG 244197 28 100.0 32 ............................ TTTAAAGCGGAAAGGAAGTGGCTTTCTGATGC 244137 28 100.0 32 ............................ AGTACAAGTCAGGCAACGCCGTGAACTATCGG 244077 28 100.0 32 ............................ ACACTGCCGCCACGCGCATAGGTCGTACAGTC 244017 28 100.0 32 ............................ ATCGAGCAATTCGTCTACGGCGCGGAAGCAAA 243957 28 100.0 32 ............................ TAGCGAGGGCTTTTTTATGGAGACAGCCATGC 243897 28 100.0 32 ............................ AGCCAAGACGGCAAGACTACACCCCGAATAGC 243837 28 100.0 32 ............................ TTGCCCATCGTCGCAACGCTCACGCGAGCGCA 243777 28 100.0 32 ............................ ACGTCAAGCTGGTGAGGGCTGGACTGTGCGCC 243717 28 100.0 32 ............................ ACAAAAGCCGCGAATGCGCCGTGGCCGGAGTT 243657 28 100.0 32 ............................ TCTTGCGCTCGCTCACAATAGCCGCGCACTGC 243597 28 100.0 32 ............................ TCACCCCGATGGCCATCAGATAAGCCAAGCGG 243537 28 100.0 32 ............................ AGTGCGGGCTTCTTGCTTTTTGGCCTTGCAAC 243477 28 100.0 32 ............................ AAGCCGAAGAAATTCGGAAGGCCAAGAGAGAT 243417 28 100.0 32 ............................ AATCACGGCGCTGACGATTTCAACCGGTCCTC 243357 28 96.4 32 ...........................G TACAAGCAATACGTCCGTGACGGTGGGGATAA 243297 28 100.0 32 ............................ GTGCGAGCGCAGCATTGGACAGGTTTTCTCTG 243237 28 100.0 33 ............................ TCAAAGAGTGCGCCGATAGTCCCAGGTGGCAGA 243176 28 96.4 32 .................T.......... GTCGAGAGCGTGCTCTATCACTATGCGGGCGA 243116 28 100.0 32 ............................ CTCGTGGTGTCCATAGAACGCATCGGGGATAC 243056 28 100.0 33 ............................ TTCTTGGCCTACTCATCTTCGCGCTGTTGTTCG 242995 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 46 28 99.7 32 GTTCACTGCCGCATAGGCAGCTCAGAAA # Left flank : GCCGCTTTGCAGCTATGGGCCGCTGGCGCATGGCTGGGTAGCCTTCGCGACCATGTCCGCACCACCGCGGTTTTGCCGGTGCCCGCCGATGCGGCGCACCGTACGCTACGCCGCGTGCAGGTCAAAAGCAGCCCTGATCGCCTGCGCCGGCGCCTTATGAAACGCCACCAACTTAGCGAAGAGCAAGCCCGCCAGCGCATCCCCGACTCGGTGAGCCGCATGACCGACTTGCCCTTTGTACAGTTGGCGAGCACCAGCACGGCGCAGCAGTTCAAGCTGTTTCTGGCTTTGGGCCCTGTTCAGCCGCAGCCGCAGTTTGGGGGCTTCAATACCTATGGCCTTAGCACGAGAGCCACCGTGCCATGGTTTTGACCCTTTTTGAAAACTACGGCTGTGGTCTATGTGAATCAACGACTTACAGCCATCTGAAATAAAAAGGTATGCGCTACCGAAATGCTCGGAATCCTTGCTGTGCAACGGTTGCGGGCAGAATTGATCGA # Right flank : GCGACGACGAAGAGATACCGACCAACCACTGGTCCATGTTACCGGGCTCTATGCTGATCACGCTGCGTTTGTTCTGTTGATCAGGCGCCAGCTTCGGGTCAGGTTTTTGGATGTATCGCACAACCGGGTGGTCACCTGCGCTCACGTTGAGCATCGTGTAGCTCTCATGAATCTCGCCCGTGGTGCGATCCACCCAGGTCGACCAGAGCCCAGGCAGTCCCCACGGCAATCCGTCTTTTCGTTGGAAACGCCACCAGATGTTCTTCCCTGTGCCCCAGTAGGGCTCATCAAAGTCAGTGGCCGGAATGATGCAGCGCTGCCCCTTGGCCCAGGCCGTTCGGTAGGAGGGCTTGGTCGCCACCTCTTCAGGCCGCGTGATCTACATGAAGCCGGCGGAAGATCCGGGCCATCTCCAAGATCATCGCCGGGAAATTATGGAGACTGGCGAGTTGTAAGCGCTGTCATCCCTTTGGAATCTGCCGGTGAAATTAGCGAAATTA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [2-2] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [45.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //