Array 1 889493-889894 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP023864.1 Prevotella jejuni strain CD3:33 chromosome II, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 889493 37 89.2 36 A..............A.........G..G........ CGCTTTGTGTGGCACAAAGAAGACTGCAAAGTATTT C [889496] 889567 37 100.0 37 ..................................... TTACATTTCCTCCATTCGGAAAGTCATACATGGAAGA 889641 37 91.9 36 ...............A.........GA.......... TATTTACAATTGGTTCAAAACTCAAAACCTAAAGGA 889714 37 100.0 35 ..................................... AAGTATGGTGTATTTAGAACAGAAAGTTTATCCGA 889786 37 100.0 35 ..................................... CAGAGGTAACGAGACGGTAACCGTCTCTTCTATTC 889858 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 6 37 96.9 36 GTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAG # Left flank : CTATATGATTTACTTGAAATGCATAATTACATACAGAAGCTAATACTTTAGCATACAATACACAATGAGCATTAGTTTCCTTCTTAAATGTAACTGGGCTACATTTGTCAGAAAACTTTAATGTCTCAGCAGTTAGCTCAATGCTATAATCAATTATCTCATCTTTAGACATGTTTTTTGTCTTAGACTTAATAATTTCTTTTTGAAACTTTGGAATAGTTATTGAACCATCTCTATTATGGCTTTTTACTAATCCCAAACGAAGAAAAGGAATAACCAAACTTATTAGTAAGATAGTAATCAATCCTCTTTTGAGTAATTTATTTTTAACTCCTATATTAATTAAGTAGATAATAACATATAATACTAATACTACTATTATTAATAAAGGTACTAAAAATAAAAAACTCCATCCAAAATCACCATAGTGTTGAAATGAATAATCTAATTGTTCACCCATAATATAATTGTTATTGTTGTTTATATTTTCCTAATTTAAT # Right flank : GGGTTAGGGGCGTGAAGGCTTTGTTTCAGGCAGGGGGAGAGTAGTAAGACTTATAAATCCGGGGTTTGTTAACAGAAATAACTACTTTTTAAGCGGGTGCAAAGGTAGTTATTTTTTTGGCAAAATGTCAAGGAGCGCAGGGTCAAATAGCACTAATCTGGAGCGGAAAAACTTATAAGTTCGTTCCTACCTGATGTTTCCAGAAGCGGGAGGTGATATCCTCGAAGGATCCATCTGGGCATCGGCGGTACATCCGCTGATTGGTGCGTGGGGAGTCGAGGGCACCGAGATGGCGGAGATAGGGCCCCACTTTGATATAGTCGAAACGCTGTTGGTCGATGAGTGGGGAGATTGCTGTGCGCCCAGTGTACCAACCAACTTTCAGTCCTTCGTGGTTCTGTCGCACGTGTTCAGCGAGCCTGTCGACCTCAGCAGGGTCGCCATCGCCCCCCATAAATCCCACACATGTTATCGTGTCTTTCGCTTCATGAATCAATGCA # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA // Array 2 1495046-1498318 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP023864.1 Prevotella jejuni strain CD3:33 chromosome II, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 1495046 47 100.0 30 ............................................... ATGTCTGGCCGTCCTCTGCCGAACGACATT 1495123 47 100.0 30 ............................................... TTTCACAAAAAGAGTCCCACCGATAGCAGG 1495200 47 100.0 30 ............................................... TTACATCTTCCTCGGTGGTGTTATCAGTCC 1495277 47 100.0 30 ............................................... AATGAGGACAATACCGTTCAGACTACTCCT 1495354 47 100.0 29 ............................................... AGTTTGTGCAAGAAAAAAGCGTATTATTT 1495430 47 100.0 29 ............................................... AGAACCTTAATATTGAAAAAACGTAGTTC 1495506 47 100.0 30 ............................................... TAATATTGTTACTACATTCCAGTCTGTTAT 1495583 47 100.0 30 ............................................... CCATAGCGATAGCACCTTAAAGCGTAGCGG 1495660 47 100.0 30 ............................................... GGTTTTTGGATCTTCGACCCGAACTTTTTT 1495737 47 100.0 30 ............................................... GTGTTTTTCAGGCATATAAATTCTTTATCT 1495814 47 100.0 29 ............................................... AGCGATCTTAGTACATTCAATCGCTTCAT 1495890 47 100.0 30 ............................................... CTAAAAAACATTCCTTATTTGTTATATCTA 1495967 47 100.0 30 ............................................... TCGCATGTGCATAAATGGTATTTACTGTAA 1496044 47 100.0 30 ............................................... CAGCTCTCTGTGACTGCTGGTATACTTATA 1496121 47 100.0 30 ............................................... ATTTCCTTGCGAAGCATAACAAGGGGTATA 1496198 47 100.0 30 ............................................... AGAGGTACTGGTCAAGCTCTCGGCTCTCGT 1496275 47 100.0 29 ............................................... GCATGACAGCTATCTATGCAGATAGCAGC 1496351 47 100.0 30 ............................................... CATGCTATTAAGTCACCCATTGCTAGGCTA 1496428 47 100.0 30 ............................................... ACAATCAGAGACATAATACAGGGAATTTAA 1496505 47 100.0 30 ............................................... GCATACTCAGCCTGTATGTTTGATATTGCA 1496582 47 100.0 30 ............................................... CGCTTTGTAACTCATCCTACTCTAAGATTT 1496659 47 100.0 30 ............................................... AAAACATCTTTGGGTACAAAAAGAGAAAGT 1496736 47 100.0 30 ............................................... CAATTAGTCAAGATACATTTAGGGGATTCT 1496813 47 100.0 30 ............................................... TATGGATGATTTCCGTCAACTCGTCCGAAA 1496890 47 100.0 30 ............................................... ACTTGTGCATGGCCTGTATGAGCAAGATTA 1496967 47 100.0 30 ............................................... ATGGCTTGTATGAAGATGACTTCCATGCTA 1497044 47 100.0 29 ............................................... AGTCTATGACTAAGGGTGAGAGTGTTGTA 1497120 47 100.0 30 ............................................... TTGCCAAGATTGGCGGATTGATAATTGACG 1497197 47 100.0 30 ............................................... TAAGTCAAAGTAACAAATAAAGAGTAACGA 1497274 47 100.0 30 ............................................... TACTTTTGCTTGACATGAAAACAATAGATT 1497351 47 100.0 30 ............................................... TCACGAGAAGAAACACTACCATCTGTTAAG 1497428 47 100.0 30 ............................................... TCGATAGAAGTGAGAGTTTTAAGAGTAGAG 1497505 47 100.0 30 ............................................... TATCGCAAAGTAGTTTCACGCTGTTTTGCA 1497582 47 100.0 29 ............................................... AAGCATTCGCTACTGATGCTTCTGTACGT 1497658 47 100.0 30 ............................................... AAGGGTCTTCTTCGCAAGTGCATCCTTCAA 1497735 47 100.0 30 ............................................... ATTCTGAAAGAAGATTAGATAAACAACCAG 1497812 47 100.0 29 ............................................... ACTCTGGTGCTAAAGTAGCTGCTAATAGT 1497888 47 100.0 29 ............................................... CTGCTGACGCTCAAGATGACTTCATGAGT 1497964 47 100.0 30 ............................................... AACGGCACAGGTCAAGCACTTGGTTCTCGT 1498041 47 100.0 30 ............................................... AAATTCCTGTTCTGTTTGAGTATCACCGCA 1498118 47 100.0 30 ............................................... AAATTCCTGTTCTGTTTGAGTATCACCGCA 1498195 47 100.0 30 ............................................... TCTTCGTCGTCGTCAGCTAACTGTTGTCCC 1498272 47 97.9 0 .........................A..................... | ========== ====== ====== ====== =============================================== ============================== ================== 43 47 100.0 30 GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC # Left flank : ACAGAATTTTCCTCTAAGATACTTCTATGGAGAGAGGGCGAATGCTATAAAAATACAAATATGGATTACACTTATAGCCAATCTGTTTATAACACTTGTGAAGAATAAAATAAAGAGACCCTGGAGCTTCTCAGGCTTGGCTACAATGATAAGAATTCTACTTATGAGTTATGTATCAATACAAAGTTTCTTTGAGCAGCAACATAGAGATTGGGAAAGATTGATTACCCAGGTAAAAGCCCCGCCAGAAGAGCTGTCATTGGTCTAGGGGGGGGTATTTGAAATTAGAACTAATCATGAGTATTTCAGCAGGGTTGGGAGAGAATATTGCAGCATATAGTGGTTTTATCGGACAGCAATATATTACAATACAGTCGCTTTAATCAATATACAATACAAAAAATCCCATTCAAAAGGAATGGGATTTTGAGTTGTGGATCAAAATTTATTTTTACAACAACTTTATATGTCGCTAACACACAATGCTTTACCACATATCA # Right flank : CTTATCATTTATTATACTTTCTCGTCACAATGGGGATTGCTATTAATACCACAAAAATGGTATTTTTCGATAAAAAGGACTATTTATAATAGTTTTTGTAATAATTACAAGGGATATTCTTTGCCGTTTACGGGGAATTATATATCTTTGCCGACGATTTCAAAATGAGGAGTGGAAGACTACTGTTAACGAAGTTCTAAAGACAAAAGGACAAGGGGATTAATGGATAACATTCTGAGTGAGAAAACGAGTTCATTATTAGGGTAATAGTGAGCCTATCATAGGGTAAGACCATATCCAGGATGGAAGAAATTTAAAATCATCGTAGAGTAAAACCTGCTCACAGTAATTAGAAAGCCTAATTAGAGTGATCAAAAGGCCTACTCATAATAGATGGGGAGTCTAATTAGAGTAAGTGAAGGGCCTACTTATCGTAAAAAAGAGGCTTAATTAGGGTAAGTGGAAGGCTTAAACATAGCAGATGGGAAATAAAAAAATAG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTATTGATACCACAAAGGTAAGACTTTTCAAGCAAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.90,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //