Array 1 1119179-1118929 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP044106.1 Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence          	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	=========================	===============================	==================
   1119178	    25	  80.0	    30	TTA.A...................G	AATTTCAAAAAGAAATTCTACAGACAATGC 	
   1119123	    25	  96.0	    31	....................C....	GCTGACGAAAAATCAGCTTACAATAATGTGC	
   1119067	    25	 100.0	    31	.........................	GCTGGCAGAAAGTCAGCTTACAATAACGTGC	
   1119011	    25	  96.0	    29	.......T.................	ATTGGATTCCCAATTTCTACAGGCAATGG  	GT,GG [1118985,1119005]
   1118953	    25	 100.0	     0	.........................	|                              	
==========	======	======	======	=========================	===============================	==================
         5	    25	  94.4	    30	AAGTTGGCGGGGCCCCAACATAGAA	                               	       

# Left flank :   AAAAATATGATAGGGGATTAAAATGAAACTATTTTATATCGTATTTCTTATTATTATATGGCTGAATATATTTTTAGGAAATGAAATCATCCATACACTGACTGTTTTAATAACAACATTGTATATTGTTAATTCAAGAAAGGGGATTAAAAATGACAGAGTTGAATAATATTATAAACTCTCTTCAATCTTTGTTTGAGTCTGAATCAGGCTATAAAATTTCGAAAAATTCAGGAGTTCCATATCAAACAGTACAAGATTTAAGAAATGGGAAAACCAAACTAGAAGATGCTAGATTTAGAACGATTATTAAACTTTATAGTTATTATGTCTCATTAAAAGAACACTAATCATGGGACAATAAAGTATTGCTAAAATAATTGAATCATTAAATGAAGGAATAGAGCCTAAGACATAATAAATCAATGTCTTAGGCTCTACAATATTATATTGGTAGTAGTTGACCGAATGAAAATGCCCATGTAACAAGCATTTTTCAA
# Right flank :  GCTGGCGGAAAGTCAGCTTACAATAATGTGCAAGTTGGGGAGTGACAACGAAATAAATTTTATAAAATATCATTTTTGTCACATTCCTACTCCCAATTCTATTTAAATATATAGAAAATTTCACCTATTATATAGATCATACACTTTGAAAATTATCATTTAAATAATCTGATTTGGAATTAAAGTGCATGAAGTATAAGTCACCTTCTTATACTAATCAAAGAGGACGTCAACAGTTATTTTATTAGGATTTTTAACATAAACATTTGCTAAATCTGAATGTAATCTTTTGCTTAAATCAATAGTGTAGTTATTACCGCCACCGGTGATCTTAAGCTTACCTTTATTACGATTTTCGTTATATAATATTTTATTTTTTATTAACGCTTCTCGTGCACGGAAATCGATTTCTTTCAATGTTAATACTGGTTTATTGCCTTGGTATATTTTATGTGCACCAATAATCGTTTGTAGTTTATCTTTGTATTGCACAAAAAGAT

# Questionable array : NO	 Score: 2.50
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:0.92,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     AAGTTGGCGGGGCCCCAACATAGAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [3,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-2.30,-2.10] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [5-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [58.3-68.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.41,0.64   Confidence: LOW] 

# Array family : NA
//